Carassius auratus (goldfish): 113113393
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Entry
113113393 CDS
T07313
Name
(RefSeq) THO complex subunit 2-like isoform X1
KO
K12879
THO complex subunit 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113113393
09122 Translation
03013 Nucleocytoplasmic transport
113113393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113113393
03041 Spliceosome [BR:
caua03041
]
113113393
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113113393
Spliceosome [BR:
caua03041
]
Complex C
Other components
EJC/TREX
113113393
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113113393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
113113393
NCBI-ProteinID:
XP_026135339
Ensembl:
ENSCARG00000065134
UniProt:
A0A6P6QSN3
LinkDB
All DBs
Position
14:complement(1673888..1727358)
Genome browser
AA seq
1570 aa
AA seq
DB search
MAALILPSDWIKNWDKSGKNEFFQFFQDLAGKPSSDEFKDLQTALYELCWHVIQGSLKVE
VAASLLTDVMELRDDMPSVLADVFCILDIETGCLEEKHKRDHFTQLVGACLICVPDGMLK
ERLDPETLESLGLIKQAQQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDLS
GNLTSHLVLENIKSLIGCFNLDPNRVLDIILEVYECRWEQDEFFIPLIKSYMCEHQTLCH
MLGFKFKFHQEPNGETPSSLYHIAAALLQHNLIALEDLYVHLLPLDSSIVEEHKREILEA
KQIARKLTMVVVPSEKTEDKEKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWQHAQSIMD
QMPAFYATSHKAIAVALCQLLHLIVEPLYRRAAVPKGAKGSLMTPLRSKQAPRPAERFDD
LSRDVFTMLCYLGPHLSHDPILFAKIVRLGKSFMKEYQSESRQDTKDKMDSLLSCFLSIA
DQVLLPSLSLMECNACMSEEIWGFFKLFPYQHRYRLYGQWKNETYGHHPLLVKIKAQTVD
RAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLITPVVDSLKYLTSL
NYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTNQ
LKAGKSFDLLILKEVVQKMAGIEITDEMTVEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQ
RLKDALLDHELALPLCLLMAQQRNGVVFSEGGEKHLKLVGKLYDQCHDTLVQFGGFLASN
LSTEDYIKRVPSVDVLCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKVH
KYIAACEQIMAPVHESVVSLHLPKVWDDLRPQFYATFWSLTMYDLAVPHNAYDREVNKLK
MQIKAIDENTEMPLNKKKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLKLEKDNWLLAK
STKNETITKFLQLCIFPRCVFSAIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSDIIYT
VASCTENESRRYGRFLCCMLETVTRWHSDRAVYEKECGNYPGFLTIFRASGFDGGNKADQ
LDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALECR
VHKICQEEKEKRPDLYALAMGYSGQLKGRKVHMVPENEFHLKEQPVRSATSGTLQNGPGN
TGKPAVAANTSAGKAEEGTAEDSDKSKDKSQAAQKAASKNSTAANKVNSSNGSSTPNSTK
GSKEKEDKEKTTKEKKEKKDKNPASTPEAKAGGKDKQKEEKPTDSKEKTPKADKDKRKDD
KKEEKSKIDGKSAEKEWSKERDVSNDSKTKEGSKVEKSAGTGSMKSLVPRSEGVESERAE
QKRRKLDAHSSPSHSSAVKDNLNDFKDSASKHHPNHSTVLPKSKEKDEEKKESDKSRDRS
NEREKKEERKDRKRVSGSVPDAVKGSGHLDYSNSDREMSQEAKRRKDENGMSSSKHSKSA
SPSESPHSNDKDSSKRSKSTSKDKSELAKPEKTSGGKKESRHDKEKSEKKRDSTGAKEEK
KHHKSSEKHR
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgatcctcccgtctgactggatcaaaaactgggacaaatccggcaaaaat
gagtttttccagttcttccaggaccttgcggggaaacccagcagtgatgagtttaaggat
ctgcagacggccctgtacgagctctgctggcatgtgatccagggcagtctgaaggtggag
gtggctgccagtctcctgactgatgtaatggagctgcgggacgatatgccttctgtttta
gctgatgttttctgtatattagatattgagacgggctgtttggaggagaaacacaagcga
gatcattttacccagctggttggagcctgtctgatctgtgttcctgacggtatgctgaag
gagagattggatccggaaacgctggagtctctggggctgatcaaacaggctcagcagttc
aaccagaagattgtcaaaatcaagaccaaactattttacaaacagcagaagttcaatttg
ttgcgtgaggagaatgaaggctacgctaagctgatcacggagcttgggcaggatctgtcg
gggaatctcaccagccacctcgtcctggagaacatcaagtcattaataggatgtttcaat
ctggacccaaaccgtgtgctggacatcatcctagaggtgtacgagtgtcgctgggagcag
gatgagttcttcatccctctgatcaagtcctacatgtgtgagcaccagaccctctgccac
atgctgggcttcaagttcaagttccaccaggagcctaacggagaaacgccatcttctctg
taccacatcgctgcagctcttcttcagcacaatctcatcgctcttgaagacctctacgtt
catctcctcccactggattccagcatcgtggaagagcacaagagagagatcctggaggcc
aagcagatcgcccgcaagctcaccatggtggtcgtcccctcggagaagaccgaggacaag
gagaaagaaaaggagaaggaagaggagaagaacgagaagcctcctgataaccagaagctg
gggctgctggaggcgctgctgaggattggtgactggcagcacgctcagagcatcatggat
cagatgccagctttctacgccacctcccacaaggccatcgccgtcgcactgtgccagctg
ctgcacctgatcgtggagccgctctaccgcagggctgcagtccccaaaggtgccaaaggc
agtttgatgacgcctctgcggagcaaacaggcaccgcggccggccgaaagattcgacgat
ctctccagggacgtcttcaccatgctgtgctacctgggccctcacctgtcccacgacccc
atcctgtttgccaagatcgtgcgactgggcaagagtttcatgaaagagtaccaaagtgaa
agcaggcaagacacaaaggacaaaatggactctctgctcagctgttttctcagtattgct
gatcaggtgctgttaccgtctctctcgctcatggagtgcaacgcctgcatgtctgaagag
atctggggcttctttaaactcttcccctaccagcacaggtatcgcctctatgggcagtgg
aagaatgagacgtacggccatcatccactcctggtgaagatcaaggctcagacggtagac
cgagccaaatacatcatgaagcgactgactaaggagaacgtgaagccctcaggaaggcag
attggaaagttaagccacagtaaccccaccattctctttgattatatcctgtctcagatc
cagtggtacgataacctcataactccagtggtggactctctcaaatacctcacctccctc
aactatgatgtgctggcctattgcattattgaagctttagccaacccagagaaagagaag
atgaagcacgatgacaccaccatttcatcatggctgcagagtctcgctagtctttgtgga
gcggttttcaggaagtatcccatcgagttagctggtcttctgcagtatgtgaccaaccag
ctgaaagcaggcaagagttttgacctgctgatcctgaaggaggtggtgcagaagatggca
ggaattgagatcacggatgaaatgactgtggagcagctggaggccatgacgggtggagaa
cagctcaaagcggagggtggctactttggacagatcaggaacactaagaagtcgtctcag
cgtctgaaggatgctcttctggaccacgagctggcgttaccgctgtgtctcctgatggcc
cagcagaggaacggggtggtcttctctgaggggggagagaagcatctcaaactcgtgggg
aagctttatgatcagtgtcacgacacgcttgtacagtttggtggcttcttggcgtctaac
ctcagcacagaagactacatcaaaagggtgccgtcagtggatgtcctctgcaaccagttc
cacacgccacacgacgccgccttcttcctctctcggcccatgtatgcccatcagattctg
tccaagtacgacgagctgaagaaggcagagaagggcaaccggcagcagcagaaggtccat
aagtacatcgccgcctgcgagcagatcatggccccggtgcacgagtctgtcgtctctctt
cacttgcccaaagtgtgggatgaccttcgacctcagttctacgccaccttctggtccctc
accatgtacgacctggcggtgccgcacaacgcctacgaccgtgaggtcaacaagctgaag
atgcagatcaaggccatcgatgaaaacacggagatgcctctgaacaaaaagaagaaagag
aaggagcgctgcacagcgctgcaggacaagctgcaggaagaggagaagaagcagctggag
catgttcagagagtcctgcaccgtctcaaactggagaaagacaactggttactggccaaa
tccactaagaatgaaaccatcacgaagttcctgcagctctgtatcttcccccgctgcgtc
ttctcagccattgatgctgtttactgcgctcgcttcgtggagctggtgcaccagcagaag
acgcccaacttctgcaccctgctctgctacgaccgagtgttctctgatatcatctacacg
gtggcgagctgcacagagaacgagtcgcgccgctacggccgcttcctgtgctgcatgctg
gagacggtgacgcgatggcacagcgacagggccgtctatgagaaggaatgtggcaattat
cctgggttcctgacgattttccgagccagtggtttcgacggagggaacaaagccgatcag
ctggactatgagaatttccggcatgttgtccacaaatggcattacaagttgactaaagcg
tcggttcactgtctggagacgggcgagtacacccacatccgtaacatcctgatcgtgctc
accaagatcctgccctggtaccccaaggtgctgaacctgggccaggctctggagtgccgc
gttcacaagatctgccaggaggagaaagagaagaggcccgatctctatgcgttagccatg
ggctactctggccaattgaaaggcaggaaagtgcacatggtgccagaaaacgagttccac
ctaaaggagcagccagtgcgcagcgccacgtctggcactctgcagaacggaccgggcaac
acgggcaaacctgcggtcgccgccaacaccagcgctggaaaagccgaggagggcaccgcc
gaggactcagataaatccaaggacaaatctcaggcggctcagaaagctgccagcaaaaac
agcaccgcggccaataaagtgaacagcagcaacggaagcagcacgccgaacagcactaaa
ggaagcaaagagaaagaagataaagagaagaccacaaaggagaaaaaggagaagaaagac
aagaacccagcaagcactccagaggccaaagcaggagggaaggacaaacagaaggaggag
aagcccactgacagcaaggagaagacccccaaggctgacaaggacaagaggaaggatgac
aagaaggaagagaagagcaagatcgatgggaaatccgccgaaaaagagtggtccaaggaa
cgcgacgtgtccaacgacagcaagactaaggaaggcagcaaagtggagaagagcgctggg
acgggaagcatgaagtccctcgtgcccaggtctgaaggagtcgagtctgaacgggcagag
caaaaaagacgaaagcttgacgcacactcgtcaccgtcgcactcctctgcagttaaggac
aatctcaacgacttcaaggactccgcttcaaagcaccatcctaaccacagcacagtcctg
cccaagagcaaagagaaggacgaggagaagaaagagtctgacaaatccagggaccgttcc
aatgagagggagaaaaaggaagagcggaaggaccggaaacgagtaagtggctccgtccct
gacgcggttaaaggatccgggcacttggactactcaaacagtgaccgcgagatgagccag
gaagccaagcgccgcaaagatgaaaatggaatgagctcctccaaacacagcaagagcgcc
agcccctccgaatcaccacactccaacgacaaggacagcagcaagcgctccaagtccacc
agcaaggacaagagcgaactggccaaaccggagaagacctctggaggcaaaaaggagtcc
aggcatgacaaagagaaatccgaaaagaagagagacagcactggcgctaaagaagagaag
aaacaccataaatcatcagaaaagcacagataa
DBGET
integrated database retrieval system
