Carassius auratus (goldfish): 113113397
Help
Entry
113113397 CDS
T07313
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113113397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113113397
03036 Chromosome and associated proteins [BR:
caua03036
]
113113397
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
113113397
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
113113397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
113113397
NCBI-ProteinID:
XP_026135350
Ensembl:
ENSCARG00000068058
UniProt:
A0A6P6QSP2
LinkDB
All DBs
Position
14:1801730..1835259
Genome browser
AA seq
2035 aa
AA seq
DB search
MSTEILRSKLKTLATKLHEFVGHSPDEESIDSPDISNGKMAASDSNSPNERMNEPGCSSE
MTKPSSSRSKRKPSSVTKHTAVAESDCVNESAGEDGMQSGQDLSKLPQGTVVVKPEPAAN
EAKDEFHGPEFRSRGSKVKEEGTRKRPDEQLQEIFNCTACGQQVNHFQKDAVFQHPALHV
LICKSCFRYYMSDDINKDEDGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLGRKELS
EIMDEESKWHCYVCRPEPLQDIVKTCEKVLLSLESSYRKPKGDTDKTKREDRKHKHRKRE
KTAVNGQDYASDGAGSLSFSCKTLTVPKELVKKTKKLIETTNGLNRTFVQFLQQTSKGSD
ASAVSNRHLKAFKSVLADLKKAHMALEESLEEEFESKGLKFQNGEEQRPAHSQTADRTVV
NSHHADPAPVREDGLDCTTKNQNPVVEENENQQESNSADVEMKESLPPSPEEPQDQSEES
EAQEQEMPDNPDFEDRSVPAGEASLDKDIVSVPTSVPEELFEMVESLAVKKENCDNGSSH
ESIDGKSTSKAEVVVSNNSLTKLGRKLVVKLTPVPLKITIKRDESKEQSPSEDMNCDTLP
KKGQDSRRSPRMKTTPLRKSPEVKSRRKPRSSTAKEEPSAAVKEPCDSDSDEVPEVLQKA
ALKASSDESQPESASGKGTKKKNIEKAKAKPKRKLEMASSDSEKSSTAKKRSTKKNKGRE
SDSSNHNSDLEKQIKNLSKLDSGKKRSKGVKKQENESSKEGKKAPTRSSERKRGSQREKP
KTKEELSSSDEEQEEEEQAANSDEDSDQQKIKPILESVMASIDGFHQSSGDEIELKAESS
SQVMDDDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADKEDGDSPKKGKDGAKKQDE
SDEEDETSDSGSDVDVKKGGRRHRLLRKKLTLSEGDSEDETTVKKKKETKKRGRRKVDSD
DSADSDFEQSSSGSSDASALSEAVSEDGGEEKSSRRKTRSSNKAGKDGERSYHKEKKKRR
RIKIQDSSSSGKSGGEEDGEDEGDEKGTPKNRKKIRKIIKDDSLRTETRDALKEEEERRK
RIAERERLREKLRETIVVEESSQVACPITTKLVLDEDEETKEPIVQVHRNLVTKLKPHQV
DGVQFMWDCCCESVKKVKKSSGSGCILAHCMGLGKTLQVVTFLHTLLLCEKLNFSTALVV
CPLNTVLNWLNEFEKWQEGLGDEESLEVQELATVKRPQERAYALQRWQEDGGVMIIGYEM
YRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHVLKNEASAVSKAMNSIKTRRRVV
LTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLVDVRVMKKRAH
ILYEMLAGCVQRRDYTALTKFLPPKHEYVLAVRLSPIQCKLYRYYLDHFTGVGSALESGR
GRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEEFIASETEESSMSLTSE
DEKPKRKKKRGKGKEQSSDKSDSDDLEVIKEWNTSSRGGNPEGRNRAEPVEEVRAPNSGP
GSPSPDWYKEFVTETDSEVLEHSGKMVLLFEILRMAEELDEKVLVFSQSLISLDLIEDFL
ELAGRAKEEGKLSPYKGEGKWFRNIDYYRLDGSTNALTRKKWAEEFNDTSNVRGRLFLIS
TRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVRTVFVYRFLAQGTMEEKIY
DRQVTKQSLSFRVVDQQQIERHFTMNELTELYAFEPDQLDDPSEKKSKRATPMLPKDPFL
AELLHSYKDHIVCYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSMRINQPSYSQM
GVGAGPNSYFPFNVAALASMSNQQLEDLINQGRQKVIEATNALKLVPREPLEDIVAQVWK
ENPSLPEAQVHSMALGRQASYEMEIKHREAAYRDVLGKQQTLMMYVQKVLANRKVQEQQM
AMARQGMLLNQLAMQNGLAAPMNQMDLLGLYQQLGALQGLPSSQLGKNPGPSKGL
NT seq
6108 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggagatcttaaggtctaagttgaaaacattagcgactaaacttcatgagttt
gtgggtcattctccagacgaagaaagcatcgattctccagacatttccaatggtaaaatg
gcagccagtgactcaaacagccctaatgagagaatgaatgagcctggttgctcctcagaa
atgaccaaaccctcatcttcacgctccaagaggaaaccttcatctgtgaccaagcacact
gcggtggctgaatctgactgtgtgaacgagagtgcaggtgaagacggcatgcagagcggt
caggatctcagcaagctgcctcaaggcacagtggtggtcaaaccagaaccggccgctaac
gaagctaaagatgagttccacggcccagagtttcgtagcagaggaagtaaagtcaaagag
gagggcactcggaaacgtcccgacgagcagctccaggagatttttaattgcacagcatgt
ggacagcaagtcaatcattttcagaaggatgccgtctttcaacatcccgcactgcatgtt
cttatctgcaagtcatgtttcagatattatatgagcgatgatatcaacaaggacgaagat
ggaatggatgagcaatgcaggtggtgtgcagagggcggaaatctgatttgctgtgactac
tgcagcaatgccttctgcaaaaaatgcattttgaggaaccttggacgaaaagagctgtct
gagatcatggatgaagaaagcaaatggcactgctatgtgtgccgcccagagccgctgcaa
gacattgttaaaacctgcgagaaagttttgctcagtctggaatcgtcgtacagaaagccc
aagggagacactgacaaaacaaagcgtgaagatcgtaaacacaagcacagaaagcgagaa
aaaactgccgtgaatggacaggactacgcctcggacggagcgggatcgttatccttttcc
tgtaagaccttaacggttccgaaagagcttgtgaagaagaccaaaaaactaatcgagacc
acaaacggtttgaatcgtacttttgtacaattcctccagcaaacgtcaaaaggcagcgac
gctagtgcagtaagtaatagacacttaaaggccttcaaatcagttttggccgatctgaaa
aaggcccacatggctctggaggaatcactcgaagaagaatttgaatcgaaaggcctcaag
tttcaaaacggagaggagcaaagaccagcacacagtcaaactgcagatcgtacggttgtt
aactctcaccacgctgaccctgctcctgtcagagaagatggattggattgcaccaccaag
aaccagaatccagtggtcgaagagaacgaaaaccagcaggagagtaactcagctgatgtt
gaaatgaaggagagcctcccaccctctccagaagaacctcaggaccagtctgaagaaagt
gaagctcaagagcaagaaatgccagataaccctgactttgaggaccgctcagtgccagca
ggtgaagcgtctcttgataaagacatcgtgtctgttccaacgtctgtcccagaggagctc
tttgagatggtcgagagtcttgcagtgaagaaagaaaactgtgacaatggcagctcacat
gagtccattgatgggaaatcaacgtccaaggctgaagttgtggtttccaataacagccta
acaaaactgggaagaaaactcgttgtcaaactaacacctgttcctcttaaaatcaccata
aaacgagatgagagcaaagaacagtcgccttcagaagacatgaattgtgacacgttgcca
aagaagggtcaagatagccgacgctcccccaggatgaagaccacaccgctgcgtaagtca
ccagaggtgaagagcagacgcaaaccgaggtcgtcaacggctaaagaagagcccagcgcc
gcagtgaaggagccgtgtgattcagactcggatgaagtccctgaggtcctgcagaaggct
gccttgaaggccagctcggatgagagtcaacccgaaagtgcttctggcaaaggtaccaag
aagaagaatatagagaaagctaaagcgaagccaaagcgtaaactcgaaatggcctcctca
gattctgaaaagtcatcaaccgcaaagaaaaggagcaccaaaaaaaataagggcagagaa
tctgactcctcaaaccacaactctgatcttgagaaacagatcaaaaacctgtccaagctt
gatagtgggaaaaaaagatccaaaggtgtcaaaaagcaagagaatgaatccagtaaagag
ggcaagaaagccccgacaaggtcatccgagaggaaacgagggtcacagagagaaaagcct
aaaaccaaggaggagttatcatctagtgatgaagagcaggaggaggaggagcaggccgct
aactcagatgaagacagtgatcagcagaagattaaaccaatactcgagtctgtgatggct
agtattgatggtttccatcagtcatcaggtgatgaaattgaattgaaggctgaatcctcc
tcccaggtgatggatgatgacgacgatccagagaacagaattgccaagaggatgcttctg
gcgcagatcaaggccaactattcctctggagcggacagttcgtctgatgatgaaaacgca
gataaagaggatggggattcaccaaagaaaggaaaagacggtgctaagaagcaagacgaa
agtgatgaagaggatgaaacctcagactctggctcagatgttgacgtgaagaaaggtgga
cgcaggcaccgtttgttgaggaagaagttgactctaagcgagggagactctgaagacgag
accaccgtcaaaaagaagaaagaaaccaaaaagagaggcaggcggaaagtggacagcgat
gattcggcagactcggacttcgagcagtcgagctcgggctccagtgatgcatcagcgctc
agtgaagccgtgagtgaagacggcggtgaagaaaagagcagcagacgcaaaacacggtcg
tccaataaagctggcaaggacggtgagagaagttaccacaaagagaagaagaaacggcgt
cgcattaagatccaagactcctcgtccagtggcaagagtggaggggaagaggatggagaa
gatgaaggggatgagaaaggaacacccaaaaaccgcaagaagatccgcaagatcattaaa
gacgacagcctgaggacggagacccgggatgcgctgaaggaggaagaggagaggaggaag
cgcattgctgagagagagcggctgagggagaaactacgagagactatcgtggtggaggag
tcatcgcaggtcgcgtgtcccatcaccacgaagctggtgctggacgaggacgaggagacc
aaggaaccaatagtgcaggttcacaggaacctggtgaccaaactcaagccccatcaggtg
gacggagtgcagttcatgtgggactgctgctgtgagtctgtgaagaaggtcaagaagtct
tctggctccggatgtattctggctcactgcatggggctggggaaaaccctgcaggtggtg
acgtttctccacactttgctgctgtgtgagaagctgaacttcagcaccgctctggtggtg
tgtcctctcaacacggtgctcaactggctcaacgagtttgagaagtggcaagagggcctg
ggagatgaggagagtttagaggtgcaggagctggccacggtgaagagacctcaggagaga
gcgtacgctttacagcgctggcaggaggatggcggcgtcatgatcataggctacgagatg
taccgcaacctcacgcaaggacgaaacatcaagagcaagaagctgaaggaaacctttcag
aaaactctggtcgatccaggtccagattttgtcatctgtgacgagggtcacgtgctgaag
aacgaagcgtctgctgtctccaaagccatgaactccatcaagactcgtcggagagtggtg
ctgacaggaacgcctctgcagaacaacctgatcgagtatcactgtatggtgaacttcatc
aaggagaatctgctgggatcagtgaaggagttcagaaaccgcttcatcaacccaatccag
aacggccagtgcgccgactccacgctcgttgacgtccgagtcatgaagaagcgcgcgcac
atcctctacgagatgctggcgggatgcgtccaaagaagggactacactgcccttacaaaa
ttcttgcctccgaagcacgagtacgtgttagcggtgcggttatcacccattcagtgcaag
ctttaccgctactatctggatcacttcacaggtgtcggatctgccttggaaagtggacga
ggccgcgccgggaccaaactcttccaggatttccagatgctcagcagaatctggacccat
ccgtggtgcctccagctggactatatcagtaaagaaaacaagggatacttcgacgaggac
agtatggaggagttcatagcctcagagacagaggagtcctccatgagtttgacctctgaa
gatgagaagcccaaaagaaagaagaagcgaggcaaagggaaagagcagagctcagacaag
tccgacagcgatgacctggaagtgattaaggagtggaacaccagttctcgtggaggaaac
cctgaggggcgcaaccgagcagagcctgtggaggaggttcgggcgccaaactccggtccc
ggaagcccttccccggactggtacaaagagtttgtgaccgagaccgattctgaggtgctg
gagcattctgggaaaatggtgcttctttttgagatcctccgcatggctgaagaattggat
gaaaaagtgttggtgttcagccagtctctcatttctctggacctcattgaagatttcctg
gagttggcaggcagagccaaagaggaaggcaagctttctccgtacaaaggtgagggcaag
tggttcagaaacattgactactatcgtctagatggttcaactaacgccctgaccaggaag
aaatgggcagaggagttcaatgacaccagtaatgttcggggtcgattgttcctcatctca
accagagctggctctcttgggatcaacttggtagctgcaaacagggtcatcattttcgac
gcctcgtggaacccatcctacgacattcagagtattttcagagtctatcgctttggccaa
gtcaggactgtgtttgtctataggtttttggctcagggaaccatggaggagaagatctat
gaccggcaagtcaccaaacagtcgctgtccttcagagttgtagaccagcagcagattgaa
cgtcactttaccatgaacgaactgacggagctctacgcgtttgagcccgaccagctggac
gatccctctgagaagaagagcaagcgggccactcccatgctgcccaaggatcctttcctg
gcagaactccttcacagttacaaagatcatatcgtctgctaccacgagcacgactctttg
ctggaccacaaggaggaagaggcactgagtgaggaagatcgtaaagcagcctgggccgaa
tacgaggccgaaaagaagggtctgtccatgcgtatcaaccagccgtcttattctcaaatg
ggcgtgggagcaggaccaaactcttacttccctttcaacgtggctgccttagcctccatg
agcaaccaacagttggaggatttgattaaccagggcaggcagaaagtgatagaagccact
aacgctctgaagttagtgcccagggaaccactggaggacatcgtcgcacaagtgtggaag
gagaatccgagtttacccgaggcccaggttcactccatggctcttgggaggcaggccagc
tacgagatggaaatcaaacacagagaagctgcttaccgtgatgtcctcggcaagcaacaa
actctgatgatgtacgtgcagaaggtgctcgccaaccgtaaggtgcaggagcagcagatg
gccatggcgaggcagggtatgctgctcaaccagctggccatgcagaacggtctggcggcc
cccatgaatcagatggatctgctgggcttgtaccagcagctcggggccctccagggcctc
ccctcctcacagctgggcaagaacccgggcccgtctaagggcctgtag
DBGET
integrated database retrieval system
