Carassius auratus (goldfish): 113113930
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Entry
113113930 CDS
T07313
Name
(RefSeq) regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113113930
03015 mRNA surveillance pathway
113113930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113113930
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113113930
mRNA cycle factors
P-body specific factors
113113930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
113113930
NCBI-ProteinID:
XP_026136278
Ensembl:
ENSCARG00000067495
UniProt:
A0A6P6QS89
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All DBs
Position
14:19659582..19664560
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AA seq
462 aa
AA seq
DB search
MKEDKENTRPREKKVEIKCDEIEKPEKPNKEKKEAMTKIVIRRLPPSLSKEDLVEQLQPL
PELDYMEFFSSDTSLFPHLFARAYLNFKNQDDIVLFRDRFDGYVFIDNRGQEYPAIVEFA
PFQKIAKKRSKKKDAKSGTIEDDVDYKNFLEFYNGDEEKFPSNPETLLEEIEAKTKELSS
KKTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEDRRKRKDAEKFKKGE
KTSDKDKDQPKDELPKIKLLKKTEKADDGDIDKPKDKPKKLEREKQKEDRLPVGGESKKR
QNGEHREEKGGKSEDSGHKNYRDRDGDRDRDRERERRQKEKERFRRQDEERRKRERQDGE
NTYRKRDDEGKKDKERVWEKRRNENTGESSVNAHPEKPTRDNRKEDSARKDRLRNKDRPA
IQLYQPGVRSRNRGGGGPGGDGPAAEKRAERESKNTQEKAAE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggaaaacacgcgtcccagagaaaagaaagtggaaataaaatgtgac
gaaattgagaaaccagagaagccaaataaagagaagaaggaagctatgacaaagattgtg
attcgacgtctccctccaagtctatctaaagaagacttagtggagcaactgcagcctctt
ccagagctggattacatggagtttttctctagcgatactagtcttttccctcatctgttt
gccagagcctatctgaatttcaaaaatcaagatgacatagttctcttcagagaccggttt
gatggctatgtcttcattgataatcgaggtcaagaatatccagcaattgttgagtttgca
ccattccagaaaattgctaagaaaaggagcaaaaagaaggatgcaaaaagtggaacgatt
gaagatgatgttgattacaaaaattttttggagttctacaatggtgacgaggaaaaattt
ccttccaaccctgagactttactcgaggaaattgaggccaagactaaggaactcagttct
aaaaaaacaacacctctcttggactttcttaagaataaacagaggataagagaagagaag
aaagaagagaggagacggagagaactagaacgaaaacgcctgcgagatgaagaacggcgc
aagtggagagaggaggacagaagaaaaagaaaagatgctgagaagtttaaaaaaggagaa
aagacatctgataaggataaggaccaacctaaagatgaactgccaaaaatcaagctattg
aaaaaaacagagaaagcggatgacggtgatattgacaagccaaaggacaagcccaagaaa
ctagagcgagagaaacagaaggaagatcgacttcctgtaggaggagaatcaaagaagcgt
cagaatggtgaacacagagaagagaaggggggaaagtcagaggatagtgggcataaaaat
tacagagatcgtgatggggatcgagaccgggacagagagagagagcgaagacagaaagaa
aaagaacgattcagaaggcaggatgaagaacggaggaaaagagaacgtcaggatggagaa
aacacctacagaaagagagatgatgaggggaagaaggacaaggagcgtgtttgggagaaa
agaaggaatgaaaacaccggagagtcctccgttaatgctcaccctgaaaagccaacaagg
gacaacagaaaagaagacagtgccagaaaagaccgtctgagaaacaaggatcggcctgca
attcagctgtaccagcccggggtgaggagccgtaaccggggtggaggaggaccaggagga
gatggaccggcagcagagaagagagctgagcgcgagtccaagaacactcaagagaaagct
gctgagtga
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