Carassius auratus (goldfish): 113113957
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Entry
113113957 CDS
T07313
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113113957
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113113957
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
PSMbeta
Motif
Other DBs
NCBI-GeneID:
113113957
NCBI-ProteinID:
XP_026136346
UniProt:
A0A6P6QT97
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Position
14:19990652..19993545
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AA seq
299 aa
AA seq
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MYSMMETEIKSPLPQSNTGSAAGGKNNSSNDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNAVSVGQRMDYTHMNGWTNSAYSLMQDQLAYPQHPSMNSPQIQQMH
RYEMAGLQYPMMSTAQTYMNAASTYSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAIT
SHSQRACLGDLRDMISMYLPPGGDSADHASLQSSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatggaaaccgagattaaaagcccccttccgcagtccaacacgggctcg
gctgcgggcggcaaaaacaacagttccaacgaccaggaccgggtgaagcggcctatgaat
gctttcatggtgtggtcccgcggtcagcggaggaagatggcacaagagaatcccaaaatg
cacaactctgagatcagcaagcgcctcggtgctgactggaaacttttgactgacgccgag
aagagacctttcattgatgaggccaagcgcttacgagccatgcacatgaaggagcacccg
gattacaaataccgtccccgcaggaagaccaagaccctgctgaagaaagacaagtattcc
ttgcccgggggactcttggcacccggtgccaacgctgtcaacaacgccgtgtcagtgggt
cagcggatggactacacgcacatgaacggctggacgaacagcgcgtactccctcatgcag
gaccagctggcctaccctcagcatcccagcatgaacagcccccagatccagcagatgcac
cggtacgaaatggcggggcttcagtaccccatgatgtccacggcccagacctacatgaat
gccgcgtccacgtacagcatgtcaccagcatacacgcagcaaacttccagtgcaatgggt
ttgggctccatggcttcagtgtgcaagacggaacccagctctcctcctccggccataacc
tctcattcccaacgtgcttgtttgggagacctgagggatatgataagcatgtacctgccc
cccggaggagacagcgccgaccacgccagcctacagagcagccggttacacagcgtccac
ccgcactatcaaagcgcagggactggcgtgaacggaacgctacccctaacccacatttga
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