Carassius auratus (goldfish): 113114347
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Entry
113114347 CDS
T07313
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113114347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113114347
Spliceosome [BR:
caua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113114347
Complex C
U4/U6.U5 tri-SnRNP related factors
113114347
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
113114347
NCBI-ProteinID:
XP_026137045
Ensembl:
ENSCARG00000000617
UniProt:
A0A6P6QXA9
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Position
2:6669669..6674931
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AA seq
489 aa
AA seq
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MAVSQQQQQQQAVSKPAGGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVNHMEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHSDSPYIRSLGFMYIRYTQPPPDLVDWYDEFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQHMKSRPRKPPQKDEQDEEEAADSGRHGDRRR
SRTPRKSQSPRKSQNRSRSRSHQREKHGASFDGELERERDRQRKERDGKDRDRDRDRDRE
RDRERDRDRRRSRTPDRTTERRRSRSREPRRSHSTSREKRNERKERDKEREAESERERSR
RKDREHHKDRERSKDKRSKGDGEERRHKEDKEDRKHREEKRSKRSRSKSRERKNKTERSS
KKRSRSSSRSRQEAGEERNRKKEHSHSKERSHKRSRSKERSHRRESSNGREHPSPEPGER
TNSVQADSP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagtcagcagcaacaacagcagcaggccgtgagcaaaccggccggcgggaaa
cacggcaacgttttgccgttatggggcaatgagaagactatgaacctcaacccgatgatc
ctaacaaacgtcctgtcttcgccctacttcaaggtccagctgtacgagctcaaaacgtac
cacgaggtggtggacgagatatacttcaaggtcaaccacatggagccatgggaaaaaggc
agcaggaagaccgcggggcagacaggaatgtgcggaggggttcgaggagtcgggacaggt
gggattgtgtccactgcattttgcttgctgtataagctctttacactgaaactgacccgc
aaacaagtgatgggtctcatcactcactcagattcaccctatatcaggtcactgggcttc
atgtacatcaggtatactcagcctcctcctgacttggttgactggtatgatgagttcctt
gacgacgaggaggagttggacgtgaaggctggaggagggtgcgtaatgacaattggagag
atgctccgctccttcctgaccaagctggaatggttctcaacattgtttccaagaataccc
gttcctgtgcagaaagcaatcgaccagcacatgaagagccgaccacgtaaacccccgcaa
aaagatgagcaggatgaagaggaggcagctgattcaggaaggcatggagataggcgccgt
tccaggacacctaggaaaagtcagagtcccaggaaatcccaaaatcgttcccggagtcgc
agccatcaaagagaaaagcatggagccagctttgatggtgagctggagagagaacgagac
aggcagcgaaaagagcgggatggaaaggaccgagatagagatagagacagagaccgggaa
agggacagggagagagacagagacagacgacgctccagaacaccagaccgaaccacagaa
cgtcgacgcagtcgcagcagggaaccacgccggagtcacagcaccagtagagagaagcgg
aacgagaggaaagaaagagataaagagagagaggctgagagtgagagagagcgtagccgc
aggaaagacagagagcaccataaagatcgagagaggtcaaaagacaagaggagtaaagga
gatggggaagagaggaggcacaaagaagataaggaggatagaaagcacagggaagaaaaa
aggagcaaacgctcaaggagcaaaagtagagaaaggaaaaacaaaactgaacgatctagc
aagaaacgctctcgctcgagcagcaggagcaggcaggaagcaggtgaggagaggaacagg
aaaaaggagcacagccatagtaaggaacgctcacacaagcgcagtcgcagcaaagagcgc
tcacaccgtcgagaatccagcaatgggcgagagcatcccagtcctgaaccaggagaaaga
acaaacagtgttcaagcagattctccctga
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