Carassius auratus (goldfish): 113114440
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Entry
113114440 CDS
T07313
Name
(RefSeq) caltractin-like
KO
K10840
centrin-2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113114440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113114440
03036 Chromosome and associated proteins [BR:
caua03036
]
113114440
03400 DNA repair and recombination proteins [BR:
caua03400
]
113114440
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
113114440
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
113114440
Centrosome duplication proteins
Centriole replication proteins
113114440
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
113114440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
AIF-1
EF-hand_5
EF_EFCAB10_C
EH
EF-hand_14
DUF7645
Dockerin_1
MTIP_N
SUB1_ProdP9
SRI
SurA_N_3
Nmad4
DUF5580_M
HerA_C
Motif
Other DBs
NCBI-GeneID:
113114440
NCBI-ProteinID:
XP_026137158
Ensembl:
ENSCARG00000051339
UniProt:
A0A6P6QUY4
LinkDB
All DBs
Position
14:188504..190723
Genome browser
AA seq
172 aa
AA seq
DB search
MATSPKKPSLGAVAPRKKASPKAELTEEQKQEIREAFELFDTDGSGYIEVKELKVAMRAL
GFEPKKEEIKKMIGEVDKDATGKISFGDFLTVMTHKMADKDSKEEILKAFRLFDDDETGK
ISFRNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNQQEFLRIMKKTSLY
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagtcccaaaaaaccctctctgggggcagtggcccctcgtaaaaaagccagt
ccaaaggctgaactgacagaagagcaaaagcaggagatccgagaggcgtttgagctcttc
gacactgatggttctggttatattgaggtgaaggagttaaaggtggcaatgagagcgctg
gggttcgagcctaaaaaggaggaaatcaagaagatgattggagaggttgataaggatgct
actggaaagatctctttcggtgattttctgacagtgatgactcataaaatggctgacaag
gactccaaggaagaaattcttaaagctttccggctgtttgacgatgacgagactggaaaa
atatctttccgcaatctaaagcgagtggccaaagaactcggagaaaacctgaccgacgag
gagctgcaggaaatgattgatgaagcagaccgagatggtgatggagaagttaaccagcag
gaattccttcgcatcatgaagaaaacgagtttgtactga
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integrated database retrieval system