Carassius auratus (goldfish): 113114593
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Entry
113114593 CDS
T07313
Name
(RefSeq) retinoic acid receptor RXR-gamma-A-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03320
PPAR signaling pathway
caua04148
Efferocytosis
caua04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113114593
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
113114593
03320 PPAR signaling pathway
113114593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113114593
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
caua03310
]
113114593
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
113114593
Nuclear receptors [BR:
caua03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
113114593
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
113114593
NCBI-ProteinID:
XP_026137256
Ensembl:
ENSCARG00000002210
UniProt:
A0A6P6QVR6
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Position
2:complement(7328787..7346853)
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AA seq
441 aa
AA seq
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MDNNDTYLHFSSSLQVTHGHLSSPPSQPPLGSLVSHHHPSIINGLGSPYSVITSSSLGSP
SASMPTTSNMGYVALNSPQMNSMNSVSSSEDIKPPPGLVGPGSYSCSSPGSLSKHICAIC
GDRSSGKHYGVHSCEGCKGFFKRTIRKDLTYTCRENKDCQIDKRQRNRCQYCRYQKCLAM
GMKREAVQEERQRGREKSDNEVESSSSFNEEMPVEKILDAELAVEPKTDAYIESSTGNST
NDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSVTVK
DGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAK
GLSNPSEVEALREKVYASLEGYTKHNYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQIT
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggataataacgacacatatctgcattttagttcttctttgcaggtaacacatggtcac
ctgagctcccctccatcccagcctcctctcggctccctggtgtcccaccatcacccctcc
atcatcaacggtctagggtcgccatactcagtcatcacttcttcctccctgggctcaccc
tcagcctccatgcccactacctccaacatgggctatgtagcgctcaacagtccacagatg
aactctatgaacagtgttagcagttcagaagacattaaacctcctccaggactggtggga
ccgggcagttactcctgcagcagcccgggatccctgtccaaacacatctgtgccatctgt
ggagaccgatcctcagggaaacattatggtgttcacagctgtgaaggatgcaagggcttc
ttcaagagaaccatccggaaagaccttacatacacgtgtcgagaaaataaagactgccag
atcgacaagcgccagcgtaaccgctgccagtactgccgctatcagaagtgtctagccatg
ggcatgaagagagaagcggtgcaggaagagaggcagcgcggtcgggaaaagagtgataat
gaggtggagtctagcagcagctttaatgaggagatgccagtggagaagatcctggatgct
gagcttgcagtggagcccaagactgacgcttacattgagtccagcacaggcaactcgaca
aatgacccagtgaccaacatctgccaggctgcagacaagcagctctttactcttgtggag
tgggctaagagaatcccgcacttctctgaccttcctctggatgaccaggtcatcctgctg
cgagcaggttggaacgagctgctcattgcttcattctcacaccgttctgtgacggttaaa
gacgggatccttttggccactggcctgcatgtccaccgcagcagtgctcacagcgcaggg
gtcggctctatatttgacagggtattaacagagctggtgtctaagatgaaggacatgcag
atggacaagacggagctgggctgtctaagagctatcgtcctctttaaccccgatgctaaa
ggattgtcaaacccgtcagaggtcgaggcattacgggaaaaagtgtacgcttcactggag
ggctacaccaaacacaactaccccgaccagcccggcaggtttgccaagctgctcctccgt
ctgcccgctctgcgctccataggactgaagtgcctggagcacctgttcttcttcaaactt
atcggagacacacctatagacactttcctcatggagatgctggaagcgccgcatcaaatc
acatga
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