Carassius auratus (goldfish): 113114762
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Entry
113114762 CDS
T07313
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113114762
Cell adhesion molecules [BR:
caua04515
]
Immunoglobulin superfamily
ROBO family
113114762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_C17orf99
VID27_N
Motif
Other DBs
NCBI-GeneID:
113114762
NCBI-ProteinID:
XP_026137516
Ensembl:
ENSCARG00000010981
UniProt:
A0A6P6QWH6
LinkDB
All DBs
Position
15:complement(3084001..3344076)
Genome browser
AA seq
1717 aa
AA seq
DB search
MMQVTWSGATVLIIFTLLQFVQSELSEGPLVPDTGTQEGTSSRVTEAPTAEHDDDNSLGY
TGSRLRQEDYAPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPR
SHRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNP
VDVMVAAGEPAVMECQPPRGHPEPTISWKKDGVNIDDRDERITIRGGKLMITNTRKTDAG
KYVCVGTNMMGERESEIAELTVLERPSFLRKPSSQSVLVDQSVEFRCEAQGDPVPTIRWR
KEDGDLPKGRHEIWEDHTLKLKRLTSGDAGTYTCQAENMMGKTEASATLTVHVPPVFVVR
PRNQVVGMGRTVTFQCEATGSPQPAIFWQKEGSQNLLFSSQPPPPSSRFSVSQTGDLTIT
AVERSDGGYYSCQALNIAGSVITKALLEVTDVISDRPPPVVRQGPTNQTVAVDGTVVLGC
QATGTPTPTILWRKDGVLVSTHDSRLKQLDTGALQIRYAKLGDTGMYTCTASTPSGEASW
KAYLEVQEFGAPVQPGRPTDPNLIPSAPFKPEVTDVSRTSVSLSWKPNLNAGATPTSYVI
EAFSHAAGSSWQTLADHVKTESFVLKGLKPSGVYLFLVRAANAYGLSDPSPISDAVKTQD
VPPTSQGVDHGQIQRELGDVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRPSPE
GAQQRLEWAMFEVRTLGENSAVVTQLKKGVTYEFKVRPFFNEFQGTDSDIKVARTLEEAP
SAAPRGVTVTGSGDNSTAILVSWQPPPEEEQNGVVQEYKIWCLGNESRYHINRTVDGSTH
SLLIPGLLSGVTYRVEVAASTGAGPGVKSEATSFQLDSSGRVLSPPLDDDNTISQQISDV
VRQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVAYQRGG
EAVSSAGRPGLLNIGEPATQPWLADTWPNSCSNHNDCPINCCTGSNGNSDSNLATYSRPA
DCIANYSNQMDNKASNLLAPDTGLYSDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPY
ATTQLIQSSLANNNVNSSSGGSGGGSAEFNEKQSWKSSQGTPQKQADINAPLQYNVMEQN
KLNKDHYRGEGPVSGTIPYNQAQDALTGGTYSSSDRGSSTSGSQGQKKGGRSTKQFKQNP
MNWTELLPPPPVNPPPCQEYTLAMDDSYDTDLQCPLPPSRMYLQPDELEEEEEEVELERG
PTPPVRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQENPDLHERRYASCNSLTILFYF
NYLQFHTFDICRPPIRRLLVSPPPPPRPLSPPHTYGYISSPLGLDTDGLEEEEDEDEGDE
TDAEVARVHQLHTHPHQQHLPQQRALLRGLEQTPASSTCDLESSVTGSMINGWGSASEED
NASSGRSSAVSSSDGSFFTDADFAQAVAAAAEYAGLRVAKHPGKGHHQLPVSGARKYQNL
PAGHRPGSPVSTDSNVSAAPGQRRPLKRQKQHPAAQTGYQRREVFTEDLPPPPIPPPAML
KSPTHPAKTIPEGPRGAMPPRSSSAEGKDKRTGSGGPRPRDGSDTRTSSSERREGQDVQK
GQKTGKSSKQDAGAGHKSRQHPGSEDILPYSRPSFPAVHSPRGERDPSSSSSLSSRGSGG
RRRGEGAPGARRNPADVGLNTIGSFQTGGEELEMVES
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggtcacatggtcaggcgccacagtcctcatcattttcactttgctacagttt
gtccagtctgagctgtcggagggtcctttggttccagacacggggactcaggaggggact
agcagtagggtcacagaggcccccactgcagaacatgatgacgacaactctctgggctac
acaggatcccgtctgcggcaggaagactacgcaccccgcattgtcgaacacccctctgac
ctgatcgtatccaagggtgaaccggccaccctaaactgcaaggctgaggggcgacccacc
cccaccgtggagtggtataaggatggagagcgtgtggaaacggaccgggacaaccctcga
tcgcaccgcatgctcctgcccagcggctcgctcttctttctgcgtatcgtacacggccgt
cgcagcaaacctgacgaaggctcctatgtttgcgtggcccgtaactacctgggagaagcg
gttagccacaacgcctcactggaagtagccattcttcgagatgatttcagacagaaccct
gtggacgtgatggtggcggcgggtgagccagcggtcatggagtgccagccgccccgcggg
caccccgaacccaccatctcctggaagaaagacggagtcaacatagacgacagagacgag
aggattacgatacgaggaggaaaactgatgatcaccaacaccagaaaaacagatgctggg
aagtacgtgtgtgtgggaaccaacatgatgggggaacgagagagcgagatcgcagaattg
accgttctagagcggcccagtttcttgcgaaagccgagcagtcagtccgtcctggtggac
cagagtgtggagttcagatgtgaagctcaaggagaccccgtgcccaccatccgctggagg
aaagaggacggagatctgcccaaggggaggcatgagatctgggaggaccacacgctcaaa
ctgaagagactgacctcaggagacgctggtacttacacctgtcaggcggagaacatgatg
gggaagacggaggccagcgccaccctcaccgtccacgttcctcctgtgttcgtggtgcga
cccaggaatcaagtggtcggcatgggccgcaccgtgacctttcagtgcgaagccacagga
agtcctcaacctgccatattttggcagaaagaaggcagtcagaaccttctgttctcctct
cagcctcctccaccctccagtcgcttctcagtctctcagacgggcgatctgaccatcaca
gcggtggagcgctcggacggaggctactacagctgtcaggctctgaacatcgctggcagt
gtgatcaccaaagccctgctggaggttacagacgtgatctcagacagacctccacccgtc
gtccgccagggtcccaccaaccagaccgtggctgtagatgggacggtggtcctgggatgc
caagccaccggcacgccaactcccaccatcctgtggaggaaagatggggtcctggtgtcc
acccacgactctcgcctcaaacagctggacacgggagccctgcagatccgttacgccaag
ctgggagacactggcatgtacacgtgcaccgcgtccacccccagcggagaggcgtcttgg
aaggcttacctggaggtgcaagagtttggtgctcctgttcagccgggccgacccacagat
cccaacctcatccccagcgcccccttcaaaccagaggtcacggacgtcagccgcacctct
gtgtctctgtcctggaagcccaacctgaacgctggagccacgcccacctcctacgtcata
gaagccttcagccatgcggcgggcagcagctggcagacgctcgcggatcacgtgaagaca
gagagcttcgttctgaagggtctgaagcccagcggcgtctacctgttcctggtgagagcg
gctaatgcgtacggcctgagcgacccgagccccatcagcgacgctgtcaagacacaagac
gtcccaccaaccagtcaaggagtggaccatgggcagatccagagggagctgggggatgtt
gtcattcacctccacaatcccacaattctctcgtcatcttctgtcagagtccagtggact
gtcgagcagcagtctcagtacatccagggctataaggtaatgtaccggccgtccccagag
ggcgctcagcagcggctggaatgggccatgtttgaggttcgaaccctgggggagaacagc
gcagtcgtcacccagcttaagaagggcgtgacctatgagttcaaagtccgacctttcttc
aacgagttccaaggcaccgacagcgacatcaaagtggccaggaccctggaggaagcgccc
agtgctgctcccaggggggtcaccgtaacgggaagcggagacaacagcacagctattctg
gtatcctggcaaccgcccccagaggaggagcagaacggcgtggtgcaggaatataagatc
tggtgtctgggtaatgaaagccgataccacattaaccgcacggtggatggatccacacac
tcgcttctgatccccggcctgctctcaggggtcacgtacagggtggaggtggcagccagc
acaggggccggtcccggggtcaagagcgaggctacgtccttccagctggactcgtcaggc
cgtgttctctcgcctccgctggacgacgacaatacgatttcccagcagatctcagacgtg
gtgcgtcagccggccttcatcgcgggcatcggcgcggcctgctggatcatcctcatggtc
ttcagcatctggctttaccgtcaccgcaagaagaggaacggcctgagcagcagctacgcc
ggcatccgcaaagtgccctccttcaccttcacccccacagtggcctatcagagaggagga
gaagccgtcagcagtgctggaaggccaggtttgttgaatataggtgaaccagctacccag
ccctggctcgcggacacttggccaaacagctgctccaatcacaatgactgccccatcaac
tgctgcaccggcagcaacggaaacagtgacagcaacctggccacctacagccgcccagcc
gactgcatcgccaactacagcaaccagatggacaacaaagccagcaaccttctagctccc
gacacgggcctttacagcgacgtggacctctccaacaagatcaacgagatgaagaccttc
aatagccccaacctaaaggacggccgtttcgtgggtcctggtggtcaacctacgccctac
gccaccacccagctcatccagtccagcctggccaacaacaacgtgaacagcagcagcggt
ggaagtggaggaggaagtgctgagtttaatgagaagcagagctggaagagcagccaggga
acgcctcaaaaacaggctgacatcaacgcgccactgcagtataacgtcatggagcaaaac
aaactgaacaaggaccactatcgaggtgaggggcccgtctcaggcaccatcccctataac
caagcccaggacgccctcacaggaggaacctacagcagctccgacagggggagcagcacc
tctggaagtcaaggacagaagaaaggtgggcgatcaactaaacagttcaaacagaaccca
atgaactggactgaactgttgcctcctcctccggtcaatccacctccatgtcaggaatac
acgctcgcgatggatgacagttatgacacagacctgcagtgccctttgccgccgtctcgt
atgtatctccaacctgacgagctagaagaggaggaggaagaggtggagctggagcgcgga
cctacgccgcccgtacggggagctgcttcctcccctgccgccgtgtcctacagtcaccag
tccaccgcgaccctcaccccgtcccctcaggaggagatgcagcccatgctgcaggagaac
cctgacctacacgagcgcaggtacgccagctgcaacagcttaacaatcctcttctatttt
aactatttacagtttcatacatttgacatctgtcgtcctcccattaggcgactcttggtg
agcccaccccctccaccacgccccctctcccctccgcacacgtacggatacatctccagc
cccctgggtctggacacagacggcctggaggaagaagaagacgaggatgaaggtgacgag
acggatgcagaggtggctcgagtccaccagctccacacccaccctcaccagcagcacttg
ccccagcagagggctctcctgcggggcctggaacagaccccggcctccagcacctgtgac
ctggagagctccgtcaccgggtctatgatcaacggctggggctcggcttcagaggaggac
aacgcctcgtcgggtcgctccagcgccgtcagctcatcggacggatctttctttaccgat
gctgatttcgcccaggccgtggcagctgcggccgaatatgctggtttacgcgtggcaaag
catcctgggaaaggccaccatcagcttccagtgtctggagcacggaaataccaaaacctc
cctgcgggacaccgtccaggcagcccagtgtccacagacagtaacgttagcgcagccccg
ggtcagaggaggcccctaaagagacaaaaacaacatccagctgctcagacaggctaccag
cgtcgagaggtcttcacagaggatctcccccctcctccgattcctcctccggctatgctg
aagtctccaacacacccggccaaaaccatcccggagggcccgcggggggccatgccgccc
agatccagttctgctgagggcaaggacaagcgaacgggttcgggtggacccagaccccgg
gatggctcggacacccggactagctcctcagaacggcgggagggccaggatgtacagaag
ggtcagaagacgggaaaaagcagcaaacaagatgccggtgcaggccataagagccgccag
cacccaggatcagaggacatcctaccttacagtcgcccatcttttccagctgtccacagt
cctcgtggagaaagagaccccagctcctccagttcactgtcctctcgagggtccggtgga
cggcggagaggtgaaggggctccaggggcccgcagaaaccctgcagatgttgggctgaac
accataggatccttccagacaggaggggaggagcttgagatggtggagagctga
DBGET
integrated database retrieval system
