KEGG   Carassius auratus (goldfish): 113114802
Entry
113114802         CDS       T07313                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03410  Base excision repair
caua04140  Autophagy - animal
caua04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113114802
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113114802
  09143 Cell growth and death
   04217 Necroptosis
    113114802
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:caua03036]
    113114802
   03400 DNA repair and recombination proteins [BR:caua03400]
    113114802
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:caua04147]
    113114802
Chromosome and associated proteins [BR:caua03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    113114802
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     113114802
   MMR (mismatch excision repair)
    Other MMR factors
     113114802
Exosome [BR:caua04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   113114802
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 HMG_box_5 ANAPC15
Other DBs
NCBI-GeneID: 113114802
NCBI-ProteinID: XP_026137622
Ensembl: ENSCARG00000028708
UniProt: A0A6P6QW53
LinkDB
Position
15:4608821..4612155
AA seq 199 aa
MGKDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFE
DMAKQDKVRYEREMKNYIPPKGEKKRRFKDPNAPKRPPSAFFIFCGDYRPKIKGENPGLS
IGDIAKKLGEMWNSSAAEVKQPYEKKAAKLKEKYDKDIALYRTKGIAGLSKKDGGEDDDE
DENEEEEEEEEDDEEEDDE
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggtaaagatccaaggaagcccagaggaaagatgtcctcttatgcctactttgtgcaa
acctgtcgtgaagaacacaaaaagaaacaccccgaagcctctgtaaacttctctgaattc
tccaagaagtgttcagagcgatggaagacaatgtctgctaaagagaagggcaagtttgag
gatatggccaagcaagataaggttcgctatgagagagaaatgaagaactacatcccacca
aagggtgagaagaagaggcgatttaaggatcccaacgcgcctaaaagaccaccgtcagca
ttcttcattttctgtggtgactaccgccctaagattaaaggggagaacccaggtctctcc
atcggagacattgccaaaaagcttggagaaatgtggaatagctcagcggctgaggtgaag
cagccctatgagaagaaagcagcaaagcttaaggagaagtacgacaaggatattgcccta
taccgcacaaagggaatcgcaggcttgtccaaaaaagatggtggggaggatgatgatgag
gatgaaaatgaagaagaagaggaggaggaggaagacgacgaggaggaggatgatgagtag

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