Carassius auratus (goldfish): 113115085
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Entry
113115085 CDS
T07313
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04270
Vascular smooth muscle contraction
caua04625
C-type lectin receptor signaling pathway
caua04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
113115085
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
113115085
09153 Circulatory system
04270 Vascular smooth muscle contraction
113115085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113115085
Membrane trafficking [BR:
caua04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113115085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PH
Motif
Other DBs
NCBI-GeneID:
113115085
NCBI-ProteinID:
XP_026138140
Ensembl:
ENSCARG00000015069
UniProt:
A0A6P6R055
LinkDB
All DBs
Position
15:complement(11300260..11355243)
Genome browser
AA seq
1389 aa
AA seq
DB search
MSDTRSTVTDRTGSTLSRDHPPDKRPESIKQPGTPTHEFDPTEVLVQKSGFVGTDRRPES
CGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKQDGAAMRAGVQTGDRIIKVNGTLVTQS
NHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSEVDVGLGSPGDYGDPFVSSPNSYNAAKR
TSSPLVSWEENSSPLIQRMDNKRMVFIEQQDIKGLKEDYSRVPTPKPLRDIQQAKKHIPH
QQGLLNRAPHESVRNSEDGCWLNEDQNKGDFSPEGFWSGSSVSTVQRGFYPASPESQRES
NCSSPKCTPRDSLNSCPSLEVDDSPNLNSRFPSTIGIPPPRLASEIIAAEDDDFDSEQEQ
VNGQCSSFQSIEILKTRPAHLAVFLHHVISQFDPAPLLCYLHADLYKQTNSKEARRIFMD
FLTFFIDRGANLKVAVPESISSELERRRPELIPEELHRQYIHTMQETLRPDVQRNLEDFR
QKRSMGLTLADVELSRLDSEQLAPERERLCAENILSKIDDVLLSSQPTEEEKCNTIQYVI
FLYMKHLGVRVKEQRNLESKRVRINFLPSKLRKSKTEKEGEKKPRFPIRVPPRWPSRIDS
VPSGRVGDNIKHRPQKQMSQPTLGGLEFMEGGRFRSSQSSEGSDLLQSPSLITSPFFSAS
YGSPSDPLGRDPEFGMSPSAVVPRLSDGLQSGDVLDSIYPPCDYIPYNMDQPDEDADRLP
DGGTPKLSRRFEELQSEDDQGSDVFSDVDPPNWQQLVGRDVLAGLTPHEIKRQEVINELF
YTERAHVRMLKVLDRVFYQKLTRDNILPPADIKNIFTNLEEIVQLHMRIADQMTAIRKKN
ELTVIDHIGDELLSWFSGGEEEKIKQAVGTFCSNQPFALELIKSRQKKDQRFTSFMQEAE
SNRLCRRLQLKDIIPAEMQRFTKYPLLMDNIAKFTDESEEKDKVRRAAECCRHILSHVDQ
SVKESENKQRLEDYQRRLDLSSLKQSENPMISEFKNLDLTKKKMVHEGPLSWKINKDKTI
ELYTLLLEDILVLLQKQDERFILRCHSKNLAGTADTKHIFSPIIKLSTVLVRSVATDNRS
FFVISMSKNGAQIYELMAQTVSEQRMWQRQIAQRADVINAKPHSIIPLPQHDGDRDGVEL
NKFSKGSERISTGSIQSAEKDSEISPTAALRDCVPDANPGEEDQVPRAGRDASYLDSELL
NGRDADSQSCSSKADEALKTLAALKQVLVTQLMAQDEGEQLCRSAGSRLLRTTSLRTPVE
HSSIRTPSRAKDYNSGDTGFYEYPEDYAAYLVLEGYGGPGESSTDDDIQVRRKESSLAHS
CAADSGISLKFSSPSSGSTSRLSRQVLTHLRCLQANLNHLKEMETKYYNLLRQRPDGSAA
DTDESRDKK
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacacggtccacagtcactgacagaaccggtagcaccctcagcagagaccac
cctcccgataagagacccgaaagcatcaagcagcctggtacccctacacacgagtttgac
cctacagaagtgctggtgcagaagagtggatttgtagggactgacaggagacccgagtct
tgtgggctggttcagagatgcgtgatcattcagaaagatgagaacggctttgggctgacc
gtcagtggggacaaccctgttttcgtgcagctcgtcaaacaggatggcgctgcaatgcgt
gcaggtgttcagacgggggacaggatcattaaggtgaacgggacattggtgacgcaatcg
aaccacgttgaagtggtgaaattaatcaaatctggctcatacgtggccctcacagtgtta
ggccggcctcccgggttaccccagatccccctctcggaggtagacgtgggtctcgggtca
ccgggggattatggggacccctttgtttcatctcccaactcttacaatgcagcgaaacgt
acctcctctcctttggtatcatgggaagagaacagttctccacttatccaaagaatggac
aacaagaggatggtgttcatagaacaacaggacataaagggactgaaggaggactacagc
agagttcctacacccaaaccactacgggatatccagcaagccaagaagcacattccacat
cagcagggcctgcttaacagggctccacatgagagtgtcaggaacagtgaagatggctgt
tggctgaatgaggatcagaataagggagatttcagcccggagggtttctggagtggaagt
tcagtgtcaactgtccagcgcggtttctacccggcctctccagagagccaaagggaatcc
aactgttccagtccgaagtgcacccccagagacagcctcaactcctgcccctccctggag
gtcgacgacagtcccaacctgaattctcgtttcccatccaccattgggatcccacccccc
cgcctggcttcagagatcattgctgctgaagatgatgactttgactctgagcaggagcag
gtgaacggacagtgcagctccttccagagtatcgagattctcaagactcgccccgctcat
cttgcggtcttcctacaccatgtgatctctcagtttgaccctgcacctctgctctgctac
ctccacgctgacctctacaaacagaccaactccaaagaagcacggcggatcttcatggac
ttcttgacgttcttcatagaccggggggcaaatttgaaagtcgctgtgcctgaatccatc
tcctctgagctcgagcgacgcagaccagagctgattccagaggaattacacaggcaatat
atacatacaatgcaggaaactctccgtccggatgtacagagaaacttggaggacttcagg
cagaagcgcagtatgggcttgaccctggctgatgtagagctgtctcgtctggactctgaa
cagctggctccagagagagagagattatgcgctgaaaacatcctctccaagatagatgat
gtcctgttgtcttcacagcccacagaggaggagaaatgcaacaccatacagtatgtgatc
tttctgtacatgaagcatctgggagttcgagtgaaagagcaacgaaacctggaatccaaa
cgagttcgaattaattttcttccttctaaactaaggaaaagcaaaacagagaaggaaggg
gagaaaaagcctcgctttcccatccgggtgccccctcggtggcccagtcgcatcgattcc
gtaccatctgggagggtcggggacaacatcaagcatcggcctcagaagcagatgtctcag
cctactttgggcgggttagagtttatggagggtggacgttttcggagcagtcagtcaagt
gagggctcagacctcctacaaagcccgagtttgatcacctctcccttcttcagtgcctct
tacggctcaccctcagaccccttgggcagggacccagagtttggtatgagcccgtctgcg
gtggttccccggctcagtgatgggctgcagtctggagatgtgctagacagcatttaccca
ccctgtgactacatcccatacaacatggaccagccagatgaagatgcagacagactccct
gatgggggcacaccaaaactgagtagaaggtttgaagagttgcaaagtgaggatgatcag
gggagtgatgttttctccgatgtagatcctccaaactggcagcagctggtcgggcgtgat
gttttagcaggcctgacgccccacgagatcaagagacaagaagtcattaatgaactattc
tacacggagcgagcccatgtacgcatgctgaaggtcctagaccgtgtcttctaccagaag
ctcacccgagacaacatactgccccctgctgatatcaagaacatattcaccaacctggag
gaaatcgtccaattgcacatgaggatagcagatcaaatgacggcgatacgcaagaagaac
gagttgacggtcatcgaccacataggagatgagttgctgtcttggttcagtggtggagag
gaggaaaagatcaagcaagcagtgggcactttctgcagtaaccagccctttgccctggag
ctcatcaaatcccggcagaagaaggaccagcgtttcacctccttcatgcaggaggctgag
agcaatcgactgtgtcgacgattacagctaaaggacatcatccctgcagagatgcagagg
ttcaccaagtaccctttactgatggacaacattgccaagttcacagatgagtcagaggag
aaagacaaagtgagacgagcagccgaatgctgtcggcacattctcagccacgtcgaccag
tctgtgaaggagtccgagaataaacagagactggaggactaccagagacgactggacctc
tcttccctaaagcagagcgagaaccccatgatctcggagttcaagaacctggatctcact
aaaaagaagatggtccatgagggtcctctgtcctggaagattaacaaagacaaaaccatt
gagctgtatactttactcctggaagacatcctggtgttattgcagaagcaggacgagcgt
ttcattctcaggtgtcacagcaagaacctcgcaggaacggctgacacaaaacacatattc
agtcccatcatcaaactcagcactgtgctggtgcgctcggtggcaacagataacagatca
ttctttgtgatctccatgtccaaaaacggagcacagatttatgagctgatggcacaaaca
gtgtccgagcagagaatgtggcaacggcagattgctcagagggcagatgttataaacgcc
aaaccccatagcatcattcctttgcctcagcacgatggtgacagagacggtgttgagtta
aacaagttcagcaaaggctccgaacggatctccacaggaagcatccagtccgcagagaaa
gacagtgaaatttcacccacggcagccctgcgggattgtgtcccggacgccaaccctggg
gaagaggaccaggtcccgagagctggcagggatgcctcgtatctggactctgaactcttg
aacggcagggacgcagactctcagtcctgttcgtctaaagcagatgaggctcttaaaacc
ttggcggcactgaagcaggtgctggtgacccagctgatggctcaggatgagggcgagcaa
ttgtgccgatcggccggcagtcgtctcctcaggaccacctctctacgcacaccggtggag
cacagctccattcgcacccctagtcgagctaaggactacaactctggagatacgggcttc
tacgagtacccagaggactatgcagcttacctggttctggaggggtacggtggcccaggc
gagagcagtacagatgatgatattcaggtccggagaaaggagtcaagtttggcccacagc
tgtgctgctgactcgggcatcagcctcaagttctcctcaccctcctcaggcagcacgtcc
cgcctcagcagacaggtcctcacacatttacgctgcctgcaggccaacctcaaccacctc
aaggagatggaaacaaaatattataatctacttcgccaaaggccggatggctcagccgct
gatacggacgagagcagagataagaaatag
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integrated database retrieval system
