Carassius auratus (goldfish): 113115215
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Entry
113115215 CDS
T07313
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113115215
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113115215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113115215
Spliceosome [BR:
caua03041
]
Common components
Common spliceosomal components
SR proteins
113115215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
113115215
NCBI-ProteinID:
XP_026138418
Ensembl:
ENSCARG00000054010
UniProt:
A0A6P6QYV8
LinkDB
All DBs
Position
15:14563837..14567811
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AA seq
251 aa
AA seq
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MSGGSVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGGFGGGGGGGGGGGGGAPRGRYGPPSR
RSENRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDN
TKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSPRRSRGSPQY
SPRHSRSRSRS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggcagtgtggtccggggccctgctggaaacaacgactgccgcatctatgtg
gggaatctgccccctgatatccgcactaaagatgtcgaagatgtgttttataagtacgga
gccattcgagacatcgatctgaaaaaccgacgaggcggacctccattcgcctttgtcgag
tttgaagacccaagagatgcagaggacgctgtttatgcccgtgatggttatgactatgat
ggctatcgtcttcgagtggagtttcccaggagcggtagaggaggttttggtggcggaggt
ggaggcggcggcggtggtggtggtggggcccctaggggtagatatggacccccctccaga
cgttcagagaatagagtaatcgtatcagggcttccaccgagcgggagctggcaggatctg
aaggatcacatgcgtgaagcaggtgatgtatgttacgctgatgttttccgagatggaact
ggtgtggtggagtttgttcgcaaagaggacatgacctacgccgttcgcaaactggataac
acaaaattccggtctcatgagggagaaaccgcgtacatccgtgtgaaggtggacggtccc
cgcagtccgagctatggaagatcaaggtcaaggagccgcagtcgcagcaggagtcgcagc
cgcagcaacaaccgtagccgaagctactccccgcgccgcagtcgaggatccccgcagtac
tccccgcgccatagccgttcccgctctcgctcctaa
DBGET
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