Carassius auratus (goldfish): 113115260
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Entry
113115260 CDS
T07313
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113115260
Cell adhesion molecules [BR:
caua04515
]
Immunoglobulin superfamily
Other
113115260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Pur_ac_phosph_N
Ig_5
Ig_6
V-set_CD47
Receptor_2B4
Sp38
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
113115260
NCBI-ProteinID:
XP_026138487
Ensembl:
ENSCARG00000055694
UniProt:
A0A6P6QYM6
LinkDB
All DBs
Position
15:16781963..16910698
Genome browser
AA seq
2167 aa
AA seq
DB search
MTVPRRGGYERRDQSLPRFSALASPGLGLERSPGSIVTTPARSLAWPNTAQCTRRDCKTF
LRNIPAIYGMWLVTLLLLYSFQEVHSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGG
APHAVLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENQAGK
IRSPSIRVKAVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPG
NRFFLTSYGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVLDPTETQPSVMDS
FQSGEVQVGRSIELPCIASGYPNPTIRWLKDGRPLPADSRWTRRLTGLTISDLRLEDSGN
YICEVTNSFGSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTVSWFRN
TEPIVPDQHFSIQGSHNETLFITAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIV
SSFSERVVAPGEPFSLMCAAKGAPPPTITWTLDDEPVARDSAHRASQYTLSDGSTVSHVN
VTNPQIRDGGVYRCAARNSAGSAEYQARINVRGPPSIRAMRNITAVAGRNTFINCRVIGY
PYYSIKWFKDGTTPLPDNHRQVVYENGTLKLSDVQKGADEGSYLCSVLIQPQLSISQTVY
VTVKVPPLIQPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVSGTSGVTIETKE
FMSSLQISKVSLEHNGNYTCIASNDAATVSSERQLIVTVPPGFRVQPNNQDGIYGKSEVL
NCSVEGYPPPKVVWKHAKGIGNPQQYHPVPLTGRIQILSNGSLLIRHVLEEDRGYYLCQA
SNGVGSDISKSMILTVKIPAMITSHPNTTMAIKGQNKELNCTARGEYPIIIRWERGDTVI
DPDRNPRYSITTNSNEKSDEVISTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEP
PDPPELEVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKSDPWELKHATRKISPTNNQA
NIVELHPASVYSIRMYSYNKIGRSQASKELTISTEEAPPDGPPMDVILQPMTSQSIRVTW
KAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQ
AFNRAGTGPSSSEINATTLEDVPSQPPQNVRAITVTSDEAVITWSEPPRMTLNGVLKGYR
VVFWSLYPDGGGCCGGQTLRLNQKWGEMQNITTIREQVELKGLEKFTNYSIQVLAYTQAG
DGVRSNVLYIQTREDHPGPPAGIKAVPSSATSVVVSWLPPIKPNGIIRKYTIYCSSPGSG
QPVRQKGAPSEYEANPELLIYRITHLTRGQQYLIWAAAVTTAGRGNISEKVTVEPAGKAP
AKILSFGGTVTTPWMKEVRLPCSSVGEPTPTIKWTKDSEDTAIPVTQDGHRNILSNGTLV
LRSVKAEDSGYYTCTATNTLGFDTIIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNG
GSSIRGFVLQYSVDNTEEWKDVFISSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEI
IEAKTHGREPQFNKDQPLFTHINSTHARLNLQGWTSGGCPITAVLLEFRPKGTWAWQSVR
TNASADIFLAELREATWYELKMKTCNSAGCGNQSSQFATLDYDGSTIPPIKSARGEGDDV
KKLFSIGCPVILVTLGMALLFIIRKKRKEKRLKRLRDAKSLAEMLISSKNNRSFDTPVKG
PPQGPRLHIDIPRVQLLIEDKEGIKQIGEDKATIPVTDTEFSQSVNPQSFCTGVSVHHPA
LIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRT
VGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAK
FEITECFISDSSSDQMTTGTNDNADSMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVP
IPHRANKSEYCNLPLYMKTDPFFRKQAELHDPCPVVPPREASIRSLAARAYHTQGRHMTL
DPSKQQALTLGHGGLSSLTSLTSSGASGTSGPASSGAAGSSSISSGTATLPQRTLTMPST
SSTSSAPSGAAAAGAGASSSSTGGSGPTPGSSKVGGSRDSLLESSSSGLGRLQKQNAGAY
SKSYTLV
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcccgcggaggggagggtacgagaggcgggaccagagtcttccccgcttctcg
gcgctggcgagtccgggactagggctggagagatcgccggggagcatcgtcaccactcct
gcacggagcctcgcctggccgaatactgcacagtgcacacgtcgggattgcaaaacattc
ctgagaaatatacctgctatttatggcatgtggctggtaactttactcctgctgtattct
tttcaagaagtgcacagcgaggatgtggtctcgacgcggctgtactttgtgaatgcttcc
ctgcagagagtgaccttctccagctcagtgggggtgtccctgccctgtcctgcgggtggc
gccccccatgccgtcctccgctggtacctggccaccggcgacgacatctatgacgtgcca
cacatccgccacgttcatgccaacggcacgctgcagctctaccccttctccccctctgcc
ttcaacagcttcattcatgataatgactacttctgcactgccgagaaccaggccggcaag
atccgcagccctagcatccgtgtcaaagcagtgttcagggaaccttacacagttcgcgtg
gcggaccaaaggtccatgcggggcaacgtggccgtcttcaagtgcctcatcccctctgct
gtgcaggagtacgtcagtgtggtgtcctgggagaaggacactgtctccatcgtcccaggt
aacaggtttttcctgacatcatatggggccctctacatatctgacgttcagaaagaggat
gccctctctacctaccgctgcatcaccaagcacaagtacagcggagaaaccagacagagc
aatggggctcgtctctctgtgctggaccccactgaaacccagccttctgtgatggacagt
ttccagtcaggagaagtacaagtggggcgaagcatagagttgccctgcatcgcctccggt
taccccaaccccacaatccgctggttgaaagatgggaggccacttcctgctgattcccgc
tggacacggcgactaactggcctcacaatcagtgatctccgtctggaagactctggaaac
tacatctgtgaagtcaccaacagctttggttccaaagaggtcacaggacaccttaatgtc
atcgagcctctgagagtcacattgtcccctaagaacctgaaaacaggcatcagcagcaca
gtgattctgtcctgtgccgttcagggctcgccccacttcaccgtctcctggtttcgcaac
acagaacccattgtgcctgaccagcacttctccatccagggatcccacaacgagactctc
ttcatcacagcagcccaaaaaagacactcaggggcatatcagtgctttgccacccgcaag
ggtcagaccgcacaggacttctccattatactgcttgaggacggcaccccacggattgtc
tcgtctttcagtgagcgcgtagtagcccctggcgagcccttctctctcatgtgcgcggcc
aaaggtgctccaccccccaccattacctggacgttggacgacgagccggtagcgcgggac
tcggcgcaccgggccagccagtacacgctctccgacggctccactgtctcgcacgtcaac
gtcaccaacccccagatccgagacgggggcgtgtaccgctgcgccgcacgcaactcggcc
ggtagcgccgagtaccaagcgcgcataaacgtaagaggtcctcccagtatccgggccatg
cggaatatcacagctgtggctggtcgcaacactttcattaactgtcgtgtgattggctac
ccctattactccatcaagtggtttaaagatgggacaacgccgttgccagacaaccatcgt
caggtggtgtatgagaacggcactctgaagttgagtgatgtgcagaagggtgcggatgag
gggtcgtatctgtgcagcgtgcttatccaaccccagctctccattagccagactgtctac
gtcacagtcaaagttcctccccttatccagccttttgacttccctcccacctccattggt
aagctgatgtacatagcttgcgtggtctcttccggagacatgccaatccggatcacctgg
aggaaggacgggcaggagatcgtgtcaggaacatcaggagtcaccatcgaaaccaaggag
ttcatgagctcccttcagatctccaaagtttcattggagcacaatggaaactacacctgt
attgccagcaatgatgcagcaactgtcagttcagagagacaacttatagtaacagttccc
cctggttttcgggttcagcccaataaccaagatggaatctatggcaagtcagaagttctg
aactgctctgtggaagggtaccctcctcctaaagttgtctggaagcatgccaaaggtata
gggaacccccagcagtaccatccagttccactgacaggtcgcatccagatcctgtcaaat
ggttctctgctgatccgccatgttttagaggaagaccggggatattacctgtgtcaggcc
agcaacggagtggggtccgacatcagcaagagcatgatactcactgttaaaattccagct
atgatcacttcccacccaaacactaccatggccataaaggggcagaacaaggagttaaac
tgtactgcccggggcgagtaccccatcatcatccgctgggagcgaggtgacaccgttatt
gaccctgatcgtaaccctcggtactccatcactaccaattccaacgagaaaagcgatgaa
gttatttccacactaaagctgaagccagcggagcgaggggattccgtctttttctcctgc
cacgccatcaactcatacggcgagggccgagggctcatccagctgacggtgcaagaaccc
cctgaccccccagagctggaggttcgagaggtcaaagatcgaagcatgaacctgaggtgg
acgcaacggttcgacggcaacagtatcatcaccagttacgacatagagtacaagaacaaa
tccgacccgtgggagctgaaacatgccacacgtaagatctcccccactaacaaccaggcc
aatatagtggagctccacccggcatccgtgtacagcattcgcatgtactcctacaacaag
attggacgcagtcaagccagcaaagagctgaccatcagcacagaggaagcacctcctgat
gggccacccatggatgtgattttacagccaatgacctctcagagtatccgtgtcacctgg
aaggcacctaagaaagagctacagaatggagtgatccgtggctatcagattggttatagg
gagaatggaccgggcagtaatggacagtacagtatagtggagatgaaagccacaggtgac
agtgaggtgtacaccctggataacttgaagaagtttgctcagtatggtgtggtggtccag
gcattcaaccgagccggaacaggaccttccagctctgagatcaatgccacaacacttgag
gatgttcctagccagccgccccagaatgtacgggccattacggtgacatcagacgaggcg
gtgatcacgtggtccgagcccccaaggatgaccctgaatggggttttgaagggctaccgt
gtggtgttctggtccctctaccccgatggaggtgggtgctgtgggggccagacacttagg
ctcaatcagaaatggggagagatgcagaacatcactaccattcgtgagcaggtggagctg
aagggcttggagaagttcacaaactacagcattcaggttcttgcctacacacaggcagga
gatggcgtccgcagcaacgtactctacatacagaccagagaagaccatcctggtcctcca
gcgggcattaaagctgtgccatcctctgccaccagtgtggtggtttcctggcttccccct
ataaagcccaatggtatcatccgaaaatacacaatttactgttccagccctggatcaggc
caaccggtgagacaaaaaggggcacccagtgaatatgaagccaaccctgagctgctgata
tacagaatcacccatctgacccggggtcagcagtacttgatctgggcagccgccgttacc
acagctggtcggggcaatatcagtgagaaggtgactgtggagcctgctggaaaagctcct
gctaaaatcctgtctttcggaggaacggtgaccactccgtggatgaaggaagttcggctg
ccgtgcagctcagtgggagagccaacacccaccatcaaatggaccaaagacagtgaggac
actgccatcccagttactcaagatggtcaccggaatattctttcaaatggtaccctggtg
ctgcgctctgtgaaagctgaggattctgggtactacacctgcacggccaccaacacactg
ggttttgacacaatcatcgtaaacctgctggtacaagtgcctccagatcaaccacgtttg
acagtttccaccacatccacttcttcaatcactctggcttggatccctggagacaatgga
ggaagttccatcagaggtttcgtgctgcagtattcagtagataacactgaggagtggaag
gatgtcttcattagctccagtgaacgatctttcaagttggacaacctgcgttgtggtacc
tggtacaaagtcaagcttgcggcaaaaaacagtgtgggagctggtcgcatcagcgagatc
attgaggccaagactcacggcagagagccgcagttcaataaagaccagcccctcttcact
cacatcaactccacccacgcccgcctcaacctgcagggctggacgagcggcggctgcccc
atcactgctgtcctgctagagttccgccccaaaggcacctgggcttggcagagcgtgcgc
accaatgcctcagctgacatattcctcgccgagttgcgtgaggccacttggtatgagcta
aagatgaagacatgcaacagcgccgggtgtggaaaccagagctcccagtttgccaccctg
gattatgacggtagcactattccacctattaagtcagcacgaggggaaggggatgatgtt
aaaaagcttttctctatcggctgccctgtcatcctcgtcacactgggcatggccctactt
ttcataattcgcaagaaacgcaaagaaaagagactcaagagacttagagatgctaagagc
ttggctgagatgctcatcagcagtaagaacaatcgaagttttgacactcctgtgaaaggc
ccacctcagggaccccgactgcacatagacatcccccgcgtgcaactgctcatcgaggac
aaagagggaatcaagcagataggtgaagacaaggccaccatccctgtgacagacactgag
ttcagccaatcagtgaaccctcaaagcttctgtacgggtgtgtctgtgcaccaccccgcc
ctcatccaaaacacaggacctttgattgacatgtcagacatcaggccgggcaccaatcca
gtatcgaggaagagcgtgaagtctgcgcacagcacgagaaaccgctattccagccagtgg
actctgactaaatgccaggcgtccacacctgctcgcactctcacctcagattggcggaca
gtgggctcccagcatggcatcacggtcacagagagtgacagctacagtgccagcctgtct
caggacacagataagggacgaaacagtatggtgtccacagagagtgcgtcttccacctac
gaggagctggcccgagcttatgaacatgctaagctggaggagcacctgcagcatgccaag
ttcgagatcaccgagtgttttatctctgacagctcctctgatcagatgaccacaggcacc
aacgataatgcagacagcatgacctctatgagcacaccatccgaaccaggcatctgtcgc
ttcactgcctctccgcccaaaccgcaggattacgaccgcggcaaaaacgttgcagtgccc
attccccaccgcgccaacaagagtgagtactgtaacctccccctctacatgaagaccgac
cctttcttccggaaacaggcggagctgcacgacccctgtcctgtggtcccgcctcgcgag
gcctccattcggagccttgccgcccgggcctaccacacacagggccgccacatgacatta
gacccctccaagcagcaggccctaacgctgggccacggtggcctgagcagcctgaccagc
ctgaccagctcaggggcctctggtacatcgggcccagcttcaagcggggccgctgggagc
tccagcatcagctcaggcacagccaccctgccccagaggactctaaccatgcccagcacc
tcctccacctcctcggccccaagcggggcagctgccgctggagcaggagccagctcgagc
tccacgggaggcagcggcccgacgcctggcagttccaaggttgggggatccagagactct
ctgctcgagagcagctcgtccggcctgggcagactgcaaaagcagaatgctggggcgtac
tccaaatcctacactctggtgtag
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integrated database retrieval system
