KEGG   Carassius auratus (goldfish): 113115784
Entry
113115784         CDS       T07313                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113115784 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caua03400]
    113115784 (xrcc1)
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     113115784 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT F5_F8_type_C
Other DBs
NCBI-GeneID: 113115784
NCBI-ProteinID: XP_026139186
Ensembl: ENSCARG00000005893
UniProt: A0A6P6R0Z8
LinkDB
Position
16:3717547..3729960
AA seq 619 aa
MPEIKLKHVVSCSSEDNTHKADNLLSSDTYRKWKAARPGEKQVSVILQLEKEEQIHSIDI
GNEGSAFIEVLVGHSTSVKNQDFQVLLVTSSFMSPTESRNGTNTNRVRLFGPNQLVKATA
QEKWDCVKIVCSQPYSKSIAYGVAFIKLHSPPDATDAPVSTPPKLTKLGQFRVKDDSPSS
GSNIQPGSLFFSRDSGAKPSAGLKVSPQNDRLSYAAAALKSEASSTQTSPSSSQQAPVKR
KFEFSKERLEAAGPPPKKPSSSGSSEPNTATPKPKARTGATASPVSSASPAQKTSDKRES
PKSKPEPKPKPKPKPKARSADPVPLNRILEGVVFVLSGFQNPFRGDLRDKALEMGARYRP
DWTPDSTHLICAFANTPKYSQVKAAGGIIVRKEWVMDCHKTKKKISFKRYLMDGAESSSE
SEAEEDESEEEVQKAKTPEKRQMTPKKQPIKEEEEEEGGSTDAEDPEDDGSGMDTEDELN
RVEMESRRKKAAQESTSVQVKDEDPYGGSTDENTDAEEEEDKPIPELPDFLTGKRFYLYG
KFPDNQKRQLQRYIIAFNGAVEDYMSEKVQFVITSEGWDESFEEALMENGNLSFVKPTWI
FAINDRQKLLPYQPYTVVP
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgcctgaaatcaaactcaagcatgtcgtgtcatgcagcagtgaagacaatactcacaaa
gcagataatctcctgagctccgacacgtataggaaatggaaagctgcgagaccgggagag
aagcaagtttcagtcattcttcagttggaaaaggaagagcaaattcacagcatagacatt
ggaaatgaaggctctgctttcattgaggtccttgttggacactccacgtccgtcaaaaac
caagactttcaggttctgctggtcacgtcgtccttcatgtcgcccacagagagtcgtaac
ggcacgaacactaaccgcgtgcgtctcttcgggccgaaccagctggtgaaggccacggcg
caggagaagtgggactgtgtgaagatcgtgtgcagtcagccgtacagcaagtcaatagcg
tatggagttgccttcataaagctgcactctcctccggacgctaccgatgctcctgtctcg
actcctccgaaactcactaaactgggtcagttcagagtcaaagacgattcaccctcctct
ggctccaacatccagccgggaagcctgttcttcagcagagacagcggcgctaaacccagc
gcaggactcaaggtgtctcctcagaatgacagattgagttacgccgctgctgctctgaaa
tctgaagcttcgtccacacagacgtctcccagcagctcacaacaggctcctgtgaaaagg
aagtttgagttcagtaaagagcgtctggaagccgccggtccgccgcccaaaaagcccagt
tcatctggttcttctgaaccaaacactgccacaccgaaacctaaagcaagaaccggagcg
accgcgagtcctgtcagcagcgcttctccagcccagaagacatcagacaagcgagagagt
ccgaaatccaagccagagcccaaaccaaaacctaaacccaaacctaaagccaggtctgca
gatccggtgcctctcaatcgcatcttggagggagttgtgtttgtcctgagcggcttccag
aacccgttccgcggagacctgagggacaaagcgctggagatgggagcccgataccggccg
gactggacgccggactccacacacctcatctgtgctttcgccaacacacccaaatacagt
caggtgaaagcagccggaggcatcatcgtcaggaaggagtgggtgatggactgccacaaa
acaaagaagaagatctctttcaaacggtatctcatggatggagccgagtccagctcagag
agtgaagcagaagaggacgagagcgaggaggaagtgcagaaagcgaaaacaccagaaaag
aggcagatgaccccaaaaaagcagccgatcaaggaagaggaggaggaggagggaggttca
acagatgctgaagatccagaggatgacggctctggcatggacactgaagacgagctgaac
agggtggaaatggagagcaggaggaagaaagcagcgcaggaaagcacatcagttcaggtg
aaagatgaagatccgtacggcggctctactgatgagaacacagatgctgaggaagaggag
gataaacccatccctgaactaccagacttcctaacaggaaaacggttctatctttacggc
aagttccctgacaaccagaagaggcaacttcagcgctacatcatcgccttcaacggagcc
gtcgaagactacatgagcgagaaggtccagtttgtcatcaccagcgagggatgggacgaa
tcgtttgaggaagccttgatggagaatggcaatctgagctttgtgaaacctacctggatt
ttcgccatcaatgacaggcagaagttgctaccgtaccagccctacaccgtcgtgccttaa

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