Carassius auratus (goldfish): 113115794
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Entry
113115794 CDS
T07313
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113115794
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113115794
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
113115794
NCBI-ProteinID:
XP_026139203
Ensembl:
ENSCARG00000023183
UniProt:
A0A6P6R1J4
LinkDB
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Position
2:12009063..12026405
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AA seq
537 aa
AA seq
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MDGIASDVAVGVKRSSDELLSGSLYNSPNSSVTANGSDSKKLRVEDSMDSPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVP
VFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSAAGESVLTPAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPPVDPSVAATLSKDSTSLLGTPSG
MVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSGPGGVLLVSNLNEEMVTPQS
LFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLSMSHLNGQKMYGKIIRVTLSKHQT
VQLPREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPENVTEEDLRLL
FSNSGGTVKAFKFFQDRKMALLQMSTVEEAIQALIDLHNYDMGRGHRLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgcaagtgatgttgcagttggtgtgaaaagaagctcggatgaattgctg
tctggcagtctgtacaacagtccaaattcttcagtcactgctaatggaagtgacagtaag
aaactgagggtggaggacagtatggatagcccaccatccagagtcattcatatcaggaaa
ctccccaatgaggtttctgagactgaggtcatcgccctgggtttgccctttggaaaggtc
accaacatcctgatgcttaaaggcaaaaatcaggcatttttggagctaggaacagaggaa
gcagctgttactatggtgaactactacacagctgttacacctcaagtgcgtaatgtccca
gttttcattcagtactccaaccacaaagagctcaagactgacagtgccctcaaccagcgg
gctcaggctgtgctgcaggcggtgtccgcggtccaggagggtggctctccaagctcggcg
gcaggcgagagtgtgttaacgcctgctcccagcccagtactgcgaataatcatcgacaac
atgttctacccagtcaccctggacgtcctccaacagatcttctccaagtttggcactgtc
atgaagataatcacgtttaccaaaaataatcagttccaggctcttctgcagttcagtgac
ccagtaaatgcccagcaggccaaactgtctttggatggtcagaacatatacaactcctgc
tgcactttgcgtattgacttctccaagctggtcaacctgaacgtaaaatacaacaatgac
aaaagccgggattatactcggcccgagctgccggcaggagacggtcaaccacctgtggac
ccatctgtggctgccactctcagcaaagattccacctcccttctgggtactccctctgga
atggtaacttcctactctagtggtggagggtttccatcttctctaggggccatcagtcct
ctaagtgcggcggcggcggcggcagcagcagcagggagggtggcattgtctggacattcg
ggacctggtggagtgctactggtcagcaaccttaacgaagagatggttacgccccaaagt
ctgtttaccctcttcggtgtctacggtgacgtgcagcgtgtgaagattctttacaataag
aaggacagtgctctaatccagatgtctgatggaaaccaagcccaattatccatgagccat
ctgaatgggcagaagatgtatggaaagatcatccgtgtgaccctctccaagcaccaaaca
gtacagctgcccagagagggtttagatgatcagggcctgaccaaggactttacaagttct
cctctgcatcgcttcaagaagcctgggtctaagaacttccagaacatcttccccccttca
gctaccctccatctctccaacatacctgagaatgtgacagaggaggatttacgactgctc
ttctcaaactccggcggtacagtaaaagcattcaagtttttccaagatcgcaaaatggct
ctgctgcagatgtccacagtggaggaggcgattcaggctctcattgaccttcataattat
gatatgggccgtggccaccgcctgagagtgtccttctcaaagtccaccatctga
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