Carassius auratus (goldfish): 113115881
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Entry
113115881 CDS
T07313
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113115881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113115881
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113115881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
Uso1_p115_C
Seryl_tRNA_N
TOR1L1_C
Motif
Other DBs
NCBI-GeneID:
113115881
NCBI-ProteinID:
XP_026139372
Ensembl:
ENSCARG00000031380
UniProt:
A0A6P6R188
LinkDB
All DBs
Position
2:12821256..12855068
Genome browser
AA seq
2343 aa
AA seq
DB search
MAALLQQALERTEINKLPKAIQNKLEKVLSEQQTEVDSLKSQHERYKADCEQQYFSLEKK
LAESQEQFLSQSKEYHSIKEENGCLLEELKKLKDVEEEQGTTQASKPPRAKYEIEAENRE
LSRLLEKRSQEVENLSEDLKRLNDKLVETNTIKMELQLKLDELQSSEVSIQFREKRMEQE
KELLQNQNTWLNAELKSKTDELYALSRDKGKEILELKCSLESKKEEVTRLQDQVTTLKKN
NDNMQKSTEELMNKLKEAKDQRASMEEKYRNELNANLKLCNLYKNAAADSEVKNAELNRA
VEELNKLLKEAMEANKGAEKKLSELQIVREKAESDLHEKVRHLEKELENANTRLADFKRR
GVPALTEEELTNLSPTAAAVAKIVKPGMKLMELYNAFVEAQDQLHLEKLESKRVHKVLDE
IILEVENKAPILKRQREEYENMQKSMTSLCAKLEQAMKEVRRLQKETDEANKRSLGLERD
KQRSERQLADMSEQVRVLLVEVEEARGNQVVREDVSSAVSSSSEVQGSRQVAFRSVQELQ
QQNQNMLAQIRDLEEQRERDQNQAKTARQTELEQNLEKFQKELEQIKEQHNHQKQLADSA
ARQRDMYRILLQTAGVELPPQGPDAGSQATAASRSGPMPTRSTPLRAAAAESVQATQAKA
ALKQLNDAFTTYKKEKAENDKLLNEQIERLHGQVSDLLSQKAKLSSQLEFAFKRYEMLQD
NVNGFRREIEALRERNQKMTATHQRHEQIIHTMTQDLREANEKLVMAELRVENIRKEKDI
LKQVENRLAQEKESILTEQRGQNLLLTNLKSIQLTMERSETDTKQRYNNQIQRLEKDIVQ
LKKKLEQEVEQRHALERHQDTQLLEAKKQLETQTALHQKTKELLRTAEQQVTSMRQQLNN
TENQSTAPKQPVRTLPRAPGVPQQEVDELRACLQQAEEQNSDLKERLKNVNTNLEQYRSL
VLSLEESVNKEKQLGEQARTSTDSQLKTARELNQQLEARLVEAEKEKLELQEEKRKAVES
IEERVKELKRSMTDMQTELQDALQRAVEAVAQEQRATQDSKLQAKLAAEAQNKYERELML
HAADVEALQAAKKQGQQSVQTLKQLEEKAQKAASELRQGRVDWEQKEKRLKEELSKEQKR
AEELQKQNTMLHDQMEDLSSKIMASTQQQTAGESSLNISLNEEGKSHEQILDILRFVRRE
KEIAETRREVAEVETLRYKQRMEYLEGELKELQDSLNVEREKLQVATKTLTQQEDIMKRM
ESMSALTETNKMLKNEKNRLEHELQQTQAKIRKLEADIKPLQDSNAELSEKSGMLQAEKR
LLEEDVKRLKTRTQQLLSQQKDSDQEESKRLNSERETHLKRIQQLIEETGKLKNEVARSQ
ASITTAQSQVQNLQDSLGKVTTERDCLKKELEAKNVDIQEKLKTITQVKKIGRRYKTQYE
ELKEQHDKMVAEAASKPAQEHEDRQASVQEIQNLKSSLSQTQNRTSELETQLDSIQKTVQ
EREAEVKSLQEQLAQVQPELSRLRAELQEKSNLEEQLRQQIAEKEEKTKKAFMGAKQKIN
QLNSAKEQLAKENEELKQQREELDVRMSALKSQYEGRLSRQERELRELREQQERHGDQKD
EAQEPGQSKVQEAQRSSDARQITLKPTPAADRGSASTSEPPTANIKPTPVAAAPSKPSPI
AGSKSTPRASIRPMITPGPVTTPTATVMPTTQVETQEALQSTESPVEHVTVFGSTSGSVR
STSPNIQTTQPILGLQQTQATAFVQPTQQQTSPEPATTVMEAVHSSQMERPSTSTAVFGS
VSATAGSSVPKRAREEEQESSTEVTDTTQEDSTHQPITKKLRIIRRIGLEVSSDASGTEE
SNDAMGEAPGESQQPPDASEEAFPVLGEGDEESLSQSVPMDQVSESQPSESQISGQDSIE
EYKHDVIIIETDSGTEEEEEEQGEPGEYEDDDDAEDEDEDGDGGMAEAADESNEGSGSAD
ANDAYEGDEAEGDGAADPGIDNEESQEASDSIQKQADSQSSGEASVSTLESFPAEPVPTT
TTTTSCLGLRLPQPPRRPHHTPPPRLNIHPVPELGPPIMQRQSGQSRRPSMGRAPQLTPG
IGSIQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMMPQASSS
HSDLSHLATHGGLGMYESPLFLPAHEEESGGRSVPTTPLQVAAPVTVFTESHPSDVSETA
SQSVPMVSTSTGSLSAPGEAVPGDDGDDVFVGEAESEGASSEACLEGQSELESAQPTDDA
SMPSTSQEPTSSSTDPSTSSGQAKPASRLLPQHQLPRRNQIIRRGGGFPRGSRGRGLNRG
TPF
NT seq
7032 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacttcttcagcaagcgctggagagaaccgagataaacaaactgccgaaagcg
attcagaacaagctcgagaaagttctgtcagagcagcagacggaagtagactcactgaaa
tcccagcacgagcgatataaagcagactgcgaacaacagtacttcagtcttgagaagaag
ctagccgagagtcaggagcagttcttgtcccaaagtaaagagtatcacagtatcaaggag
gagaatggctgcctcttggaggaactaaagaaactaaaagatgtagaggaagagcagggg
accacacaagcgagtaagcctccaagagccaaatatgaaattgaggcagaaaaccgagag
ctctcgcggttgcttgagaagagatctcaagaagtggaaaacctcagcgaggatcttaaa
cgtctcaacgacaaacttgtggagaccaacacaatcaagatggagctccagcttaaactg
gatgaacttcagtcttctgaggtttccattcagtttcgtgagaagcgaatggaacaagaa
aaggagctccttcagaaccagaacacatggctgaatgcagagctgaagagtaagacggat
gagctgtacgcattatctagagacaagggcaaagagatcctggagctcaagtgctcttta
gagagcaagaaggaagaggtgaccagacttcaggaccaagtgaccacgctcaagaaaaac
aatgacaacatgcagaagagtactgaggagctcatgaataaactcaaagaggctaaagac
cagcgggcctccatggaggaaaaatatcgcaatgagctgaatgctaacctcaaactctgt
aatttgtacaagaacgcagcagcagactctgaagttaagaacgctgaactgaacagagct
gtagaagagctcaacaaactgttgaaggaggcgatggaagccaataaaggcgcagagaag
aagctgtcagagctgcagattgtgagggagaaagcggagtctgatctacacgagaaggtc
aggcatctggagaaagagctggaaaatgccaacacgcgacttgcagactttaaaaggaga
ggcgttccggctctcacagaagaggagctgacaaacctctccccaactgcagctgcagtg
gccaagattgttaagcccggcatgaagctaatggagctgtataatgccttcgttgaggca
caagaccagctgcatcttgagaagctggagagcaagcgtgtgcacaaggtcctggatgag
atcattctggaggtggagaacaaagctcccatcctgaaacggcagagggaagaatatgaa
aacatgcaaaagtccatgaccagcctatgtgccaaactggagcaggctatgaaggaagtc
cgtcgactccagaaggagacggatgaagccaataagagatctttagggctagagcgagat
aaacagagatcagagagacagttagcagacatgtctgaacaggtgcgtgtgctgctggtg
gaggtggaggaagcacgtggtaatcaggtggtgcgtgaggatgtgagctcggctgtgagc
agcagctctgaggtccagggatcacgccaggtggctttccgcagcgtccaagagcttcag
cagcagaaccagaacatgctggcccagatccgagatctggaggagcagagggagcgggac
cagaaccaggcgaagactgccaggcaaaccgagttggaacagaatctagagaagtttcag
aaggagttggagcagataaaggagcagcataaccaccagaagcagctggctgactcagcc
gcccggcaacgagacatgtaccgtatcctgttgcagacagctggagtcgagcttccacca
cagggtccagacgctggatctcaagccaccgctgccagcagatcaggacccatgcctacc
agatctacacccctgagggctgcagctgcagaatctgtccaggctactcaggccaaagca
gcacttaaacagcttaatgatgcctttacaacatataaaaaagagaaggcagaaaacgac
aagcttctgaacgaacagattgagaggcttcatggtcaagtgtctgacctgctctcacaa
aaggctaaactctcctctcagctggagtttgccttcaaacggtatgagatgcttcaggac
aatgtgaatggttttagacgagagattgaagccctacgtgagaggaatcaaaagatgact
gccactcatcagagacatgaacaaatcattcacacaatgactcaagatctaagggaggcc
aatgagaaactagtcatggctgagttgcgcgttgagaacatccggaaggaaaaagacatt
ctgaagcaggtggagaacagactggcccaggagaaagagtccatcctgaccgagcagcgg
ggccagaacctcctgcttaccaatctcaaatccattcagcttaccatggaacgctctgag
acggataccaagcagcgctacaataaccagattcaacgtctggagaaagatatcgtccag
cttaagaagaagctggaacaggaggtggaacagagacacgcactggaacgccaccaagat
actcagcttctggaggctaagaagcagttggagacacagacagcactacatcagaagact
aaagagctgctaagaactgctgaacagcaggtcacctccatgaggcagcaactgaacaac
accgagaaccagagcacagctcctaagcagcctgtgaggacgttacccagagctcctggt
gttcctcaacaagaggtggatgagctccgtgcatgtctacagcaggccgaagaacagaac
tccgacctgaaggagcgtttgaagaatgtcaacaccaacctagagcagtacagatccttg
gtgctcagcttagaggaatctgtaaacaaagagaagcagttgggtgagcaggcacggacc
tccactgacagccagctgaagaccgcgcgagagttgaaccagcagctggaagcccggctg
gtggaagcagaaaaggaaaagctagagctccaggaggagaagaggaaagctgtggagagc
attgaagaacgggtgaaggaactgaaaaggagcatgacagacatgcagacagagctgcag
gatgccctccagagagctgtggaagcagtggcccaggaacagagagccactcaggacagc
aaactacaggctaaactggctgcagaggctcagaataaatatgagcgagagctcatgctg
catgctgcagatgtggaagccctacaggccgccaagaaacagggacagcagtcagtgcag
accttgaagcagcttgaggagaaggcgcagaaagctgcatctgagctgcgtcagggccgt
gtggactgggaacaaaaagaaaagagactgaaggaggaactttctaaagaacagaagaga
gccgaggagctgcagaagcagaacaccatgcttcatgatcagatggaagacctgagcagc
aagataatggcctccacccagcagcagaccgctggagagagcagtctgaacatctctctg
aacgaggagggcaaatctcatgaacagatcctggacattctcaggtttgtacggcgggag
aaggagatagcagagacccggcgagaagtggcggaagtggagaccctgcgatataaacag
cgcatggagtacctggagggagagctaaaggaactgcaggatagcctgaatgtggagagg
gaaaagctacaggtagcaacaaagaccttgacacagcaggaagacataatgaagcggatg
gagagtatgagtgctctgactgagaccaacaagatgctgaagaatgagaagaacagactg
gagcatgaactacaacagactcaagcaaagatccgtaaactggaggcagacatcaagccc
ctgcaggactccaatgctgagctgagtgagaagagtggcatgctacaggctgagaagaga
ctcctggaggaggacgtcaagcgcttgaagactcgaacacagcaactgcttagtcagcag
aaggacagtgatcaggaggaaagtaaaaggcttaattctgagagggagacccatctcaaa
cgcatccagcagctcatagaggagacggggaaactcaagaatgaggtggccaggagccaa
gcttcaatcacaacagctcagagccaggtgcagaacctgcaggatagccttgggaaggtc
accactgaaagagactgtctgaagaaggagctggaggcaaagaacgtggatatccaggag
aaactcaaaaccatcacgcaggtcaagaagatcggccgtcggtacaaaacccagtatgaa
gagctcaaagaacagcatgataagatggtggcagaggctgcgtctaagccagcacaggag
catgaagaccgtcaggcctcagtgcaggagattcaaaacctgaagagctcactgagtcag
acacagaacagaacctccgaactggaaactcagctggacagcatacagaagacggtgcaa
gaacgtgaagctgaggtgaagagcctgcaggagcagctggcgcaggtgcagccggagctc
agtcgtctgagagcagagcttcaggagaagagtaacctggaggagcagctccgacagcag
atcgctgagaaagaggagaagaccaagaaagccttcatgggtgccaagcagaagatcaac
cagctcaacagtgcaaaggagcagctggcgaaagagaatgaggagctaaagcagcaaaga
gaggagctggatgtgaggatgagtgcgctgaagtcccagtatgaaggccggttgagccgg
caggagagagagctgagggaactccgtgagcaacaggagagacacggagatcagaaagat
gaagctcaggagcctggccagagcaaggttcaggaggcacagaggtcatcagatgctcgc
cagatcactctcaaacccacacctgctgctgacagaggaagtgccagtacatccgagccg
cccactgccaacatcaagcccacaccagtggctgctgcccccagcaagccttcaccaatt
gcagggagtaagtctacccctagggcaagcatccgcccaatgataacacccggacctgtg
accacgcccacagccacagtcatgcccacaacacaggtggaaacgcaggaagctctccag
tccacagagagtccagtggaacatgtgactgtcttcggcagcaccagcggctcagtgcgt
tccaccagccctaacattcagactacacagccaatcctcggcctacagcagacacaagcc
actgccttcgtccagcccactcagcagcagaccagtccggagccagcaacgaccgttatg
gaggcagtacatagctcacagatggagaggccatccacttccactgctgtctttggttca
gtgtcagcaactgcaggctcatctgtgcccaagcgagcgcgagaggaagagcaggagagc
tccaccgaggtgactgacaccacacaggaagactccacccaccaacccatcacgaagaag
ctccgtatcataagaagaattggcctggaggtgagcagtgatgcttcaggcactgaggag
agtaatgatgctatgggtgaagctccaggagagagccagcagcctcctgatgccagtgag
gaagcatttcccgtgttaggtgagggagatgaagaatctttgtctcagtctgtcccgatg
gatcaggtgagtgagtcccaaccctccgagtctcagatcagcggacaggactccatcgag
gagtacaagcatgacgtcatcatcatagagacagatagcggcactgaggaggaagaggag
gagcaaggggagcctggagagtatgaagacgatgatgatgcagaagatgaagatgaagat
ggtgatggagggatggcagaagcagcagacgagagtaatgaaggcagtgggagtgcggat
gccaatgatgcctacgagggggatgaggcagagggtgatggagcagctgatccaggcatt
gacaacgaagagagtcaagaggcatccgattcaatccagaagcaagcggactctcagagc
agtggtgaagctagtgttagcaccctggagtcgttccctgctgagccagtccccaccacc
accaccaccacatcctgcctgggcctacggcttccccaacccccccggagaccacatcac
accccaccgcctcgcctcaacatccaccccgtccctgagctcggaccccccatcatgcag
agacagtctggacagagcagacggccctcgatgggtcgtgcaccccagctcacgcctgga
atcggaagcattcaacatttctttgacgatgatgacagaatggttcctagcactcccacc
cttgtggtgccacaccgtacagatggctttgcagaggccattcattcccctcaggtagcc
ggagttcctcgcttccgtttcggccctcctgaggatatgatgccccaggccagctcctct
cattctgacctgagccatctggccacacatggagggttgggcatgtatgaaagtcctctc
ttcctgcctgctcatgaagaagagtctggaggcaggagtgtccccaccacccctctacaa
gtggctgctccggtgaccgtattcacagagagccacccctctgatgtgtcggagacggcc
tctcagtcggtccccatggtcagcacgtccaccggcagtctgagcgcaccaggagaagct
gtcccaggggacgatggagatgacgtttttgtgggggaggctgagagtgaaggggcgagt
agtgaggcatgtctcgagggccagtcggagctggaatctgcacagccgaccgatgatgca
agcatgccctccactagtcaagagcccacgtccagctccacagatcccagcaccagtagt
ggtcaggccaaacctgcgagccggctccttcctcagcaccagctgccgcgcaggaaccag
atcatcaggagaggcggtggttttcctcgtggaagtcggggtcgaggactcaacagaggc
acccccttctaa
DBGET
integrated database retrieval system
