Carassius auratus (goldfish): 113116045
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Entry
113116045 CDS
T07313
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113116045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113116045
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113116045
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113116045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
113116045
NCBI-ProteinID:
XP_026139666
Ensembl:
ENSCARG00000014261
UniProt:
A0A6P6R2D2
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Position
16:9579605..9590644
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AA seq
893 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEMEQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRLIERHRYHI
RMLETILRMLDNDSIQVDAIHKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEEIPATLMA
TSPQGHNEDEMFLQSSSTPTSTTSSSPIPPSPATGTMEILEDKRGRSTDSEVSQSPVKNG
NPSLSSFSSSASSGSSSSSSSLVSMATVVGGCTAVSGGSSLLGSFSSAVQQHAPQSQQQV
QVKLSSTSVLSNNTPSPPSHPTLPASTTSSLPSSSTPGPVTSNSQSQASSIPGVEGSRLG
LGLGKGGVTVTSSSSGAQMPGLGMAGISNSLNTMAGLLSGSTPAPYAQAAAGGTAGSVSS
GPVGSGSVSSVISVPSAGAGGANTGVTSNGTGTGAGVGLLGSSPGHGALTGGILNLVPGQ
TALQGSAQIPVSHVGTATGGGNGESGLSGNGSSSVASAGVGTNVAPARPPSGLKQNGATS
YSAVVADSTPDSSLSSASQSQNSHSSSSSSSTSQTLDNGPSLLSSITLPPSSPSPSFTDS
TSGGGSLLNGPHSYTLNTESIKTPEPPSSLKAMAERAALGLTLDGEISSLHLPDRAPPGP
TTAPQPAVSEVNLPPSLGACPLGPTPLTKEQLYQQAMQESAWTHMPHPSDSERIRQYLMR
NPCPTPPFHHQMPPHHSDSIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALKKQSWRFHT
KYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagaaaactacaaggtgaaatagatcgatgtttgaaaaaagttgctgaa
ggcgtggaacagtttgaagacatttggaaaaagcttcacaatgcagccaatgccaaccag
aaggaaaagtatgaggctgatctcaagaaagaaattaaaaagctccagcggctacgagac
cagattaagacatgggtggcatccaatgagatcaaagacaaacggcagctagtggagaac
cggaagcttattgaaacgcaaatggagcgatttaaggtggttgaaagagaaaccaagaca
aaggcctactctaaagaggggctgggcttggctcagaaagtagacccagcgcagaaagag
aaggaggaaatggaacagtggcttacgaacacaatagacactttgaacatgcaggtggac
cagtttgaaagtgaagtcgagtccctctctgttcaaacacggaaaaagaaaggagacaag
gagaagcaggatcggattgaagaactgaagaggttaatcgaaagacaccgctaccacatt
cgtatgctagagaccatcttgaggatgttggataacgattcgatccaggttgatgctatc
cataagatcaaagatgatgtggaatattatatagactcctcgcaagacccagactttgaa
gagaatgagttcctctacgatgatctggacttggaggaaataccggcaactttgatggcg
acgtctcctcagggccataatgaagatgagatgttccttcagtccagcagcacaccgacc
tccaccacttcctcttcccccatccctccatctcctgccacaggcacaatggagattttg
gaggataagagaggtcgatcgacagacagtgaagtcagtcagtctcctgtgaagaatggc
aacccatctctctcgtccttctcctcatccgcctcctcaggctcctcctcctcctcctct
tcactggtttctatggcgaccgttgtcggtggctgcacagcggtctctgggggcagcagc
ctgctgggaagctttagcagtgcagtgcagcagcatgctcctcagtctcaacagcaagta
caggtcaaactttcttcgacatccgttctttccaacaacacacctagtccacctagccac
ccaacgctacctgcctccactacttcctctctgcctagttcaagcacacctggcccagtt
acttccaattctcagtcccaggcttcatctattcctggggttgagggctctagactggga
ttgggcctggggaaagggggtgtgacagtgaccagcagcagtagtggggctcagatgcca
ggtctgggcatggccggcatctctaattctctcaacaccatggcagggcttctctcaggc
tctacccctgccccctacgcccaggcggctgcaggcggaacagcaggtagtgtctccagt
ggtccggtggggagtggcagtgtaagttctgtcatatctgtaccgagcgcaggtgcaggg
ggagcaaacacaggcgtgaccagcaatggtacgggtacaggggctggtgtgggcttgcta
ggttccagtccaggtcacggtgccctaaccggaggaattcttaacctggtcccagggcag
acggctctccaggggtctgcacagatacctgtaagccatgtgggcacagcaactggagga
ggaaatggagagagcggattgagtggaaatggaagcagttctgtggcgagtgcaggagtg
ggaacgaatgtagcgcctgcaagaccccctagtggcctcaaacaaaatggagcaactagt
tacagtgctgtggttgcggacagcacaccagactcctcactcagcagtgccagccaatca
caaaacagccattcctcatcctcaagctcatcaaccagtcaaactctggataatggcccc
agtttattgagttctatcactctacccccctcctccccatcaccttctttcactgacagc
acatctggtggtgggagtctgctaaatggcccacactcctacacactcaacacagaatcc
atcaagactcctgaacctccaagctctttgaaagccatggcagaacgggcggcactggga
ttgacactggatggagagatttcttcactacacctcccagatcgagctccacctggaccc
acaacggctcctcagcctgctgtgtcagaggtcaacctgccgccatctttaggggcgtgt
cctttaggccccacccctctcactaaagagcagctttaccaacaggcaatgcaggagtca
gcatggacacacatgccccacccgtccgattccgagagaatcaggcagtacctgatgaga
aacccctgtcctacaccgccattccaccaccagatgcccccacatcattcagactctatt
gagttctaccagagattgtccactgaaacactcttcttcattttctactacctggagggc
acaaaggcacagtacctgtcagctaaagcactgaagaagcaatcgtggaggttccacacc
aaatacatgatgtggttccagcggcacgaggaacccaagaccatcactgatgagtttgaa
cagggcacgtacatttactttgactatgaaaagtggggccagagaaaaaaggaaggattt
acgtttgagtacagatacctggaggacagagacctgcagtga
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