Carassius auratus (goldfish): 113116118
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Entry
113116118 CDS
T07313
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113116118
Membrane trafficking [BR:
caua04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
113116118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_EndoS
LRR_Zer-1
LRRNT
V-set
LRR_RPS2
C2-set_2
C2-set_3
LRR_6
Ig_C17orf99
Big_6
Motif
Other DBs
NCBI-GeneID:
113116118
NCBI-ProteinID:
XP_026139817
Ensembl:
ENSCARG00000024556
LinkDB
All DBs
Position
16:10820421..10831529
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AA seq
604 aa
AA seq
DB search
MFVDLCGRQGAWTVLLLWFTNLSAADLTCPQKCTCYLDTLEVNCSSRHLTGVPEGLPNNA
KRLDLSRNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLTIKNNRLKI
LPVGVFSGLSNLQRLDISDNEILVFLDYTFRDMINLQLLDAGENDLVFISQRAFVGLQAL
KELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTINVLPNNAFRRLHQLRTLQILHWPSLE
TLNSNSLVGLNLTTLILSNCNLSAVPYAALRPLTYLQYLDLSYNPITSIQANLLGELLRL
QQLHLVGGKLLRIEPGAFRGLVHFRLLNVSSNRLSTLEEGVFHSVGNLQTLRLDRNPLAC
DCRLLWVMRRRRRLDFDGRQPTCSPLNQHKKAFRDFSEADLPVIFTCRRAQILNRQQQDA
SVVEGMSVRFDCKADGYPSPSITWLSAQQTALSSVGRVRVLANGSLEVRYTQVQDSGTYL
CTASNAAGNDSVSVSLQVEGLPQNRTVSYFSDEGWMETSLPPSTNSSARVSSPYPFDAKT
LIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGGDTGRFT
MKLI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtggatctgtgtggccggcagggcgcatggacagtcctgctgttgtggttcaca
aacctatcagctgcagacctcacctgtccgcagaaatgcacttgttaccttgacacttta
gaggtcaactgctcctcaagacacctgacaggtgtgcctgaggggttaccaaacaatgcc
aaacgcttagatctttcaagaaaccagctgaaaacgctggccaggcgtcagttctccagc
ctgtcaaagctagaggaccttgacctaagtgagaatataatctctatgattgaggtggaa
acatttcaggggctaaagaacctgcgatacttgacgattaaaaacaaccgtctcaagatc
ctaccggttggggttttctctggactctccaaccttcaacgtctggatatcagtgataat
gagatcctggtttttctggattacacatttcgggacatgattaatctacagctgctcgat
gcaggagaaaatgacctggtgtttatctcgcaacgggcatttgttgggcttcaggcgctg
aaggagttgaacgtagaccgcagtaatttgacctccatccccaccgaggctctgtcgcaa
cttcagagcttgaccaagctgcgtctgcgcaagctgaccataaatgtcctgcccaacaat
gcctttcgccgactccaccaactgcgcaccttgcagatcctccactggccttctctcgag
acgctaaatagcaacagcttggtaggtctgaaccttaccaccttaattttaagcaactgc
aatctcagcgccgtaccttatgctgcactgcgtcctctcacctacctgcagtaccttgac
ttgtcctacaaccccatcacctccatacaggccaaccttcttggggagcttctgcggctc
caacagttgcacctggtaggtggaaaactgctacgtattgagccaggtgccttcaggggt
ctggtccactttcgtctgctcaatgtgtcctcgaatcgtctgtccacattggaagaaggc
gtcttccactccgtggggaacttgcagacactgaggctggacagaaacccattggcttgc
gactgcaggttactctgggtcatgcgacggcggcggcggctggatttcgatggccgccaa
cccacctgttcgcctctaaatcaacacaagaaggcttttcgtgacttttcagaagctgat
ctcccggttatatttacttgcaggcgagcgcagattctgaaccggcagcagcaggatgcg
agcgttgtggagggcatgagtgtacggtttgactgcaaagcagacggctatccatcacct
tctattacttggctgtcagcccagcagactgcacttagctctgtcgggagagtacgagtg
cttgctaatgggagcttggaggtgcgttacacccaagtacaggacagtggaacgtatcta
tgcactgcatctaatgcagcaggcaacgacagcgtctcagtgagtctgcaagtggagggg
cttccacaaaaccgcacagtgtcatatttctcagacgagggatggatggaaacttcatta
cctccttctactaactcctctgcaagggtgtcaagtccttacccgtttgatgcaaaaaca
cttatcattgctaccaccatgggatttctctctttcctgagctctgtggcgatctgtttt
gtgtttatgttcttctggagtcagagcaaaggtcagattaaacacactgccactatagac
tttgtgccacgatcatccatgggtggaggtggagatggtggggacactgggagattcaca
atgaagcttatttga
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