Carassius auratus (goldfish): 113116122
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Entry
113116122 CDS
T07313
Symbol
bcan
Name
(RefSeq) brevican core protein isoform X1
KO
K06795
brevican
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
caua00535
]
113116122 (bcan)
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113116122 (bcan)
04091 Lectins [BR:
caua04091
]
113116122 (bcan)
Proteoglycans [BR:
caua00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
113116122 (bcan)
Glycosaminoglycan binding proteins [BR:
caua00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
113116122 (bcan)
Lectins [BR:
caua04091
]
C-Type lectins
Lecticans
113116122 (bcan)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
hEGF
Ig_3
ig
I-set
Motif
Other DBs
NCBI-GeneID:
113116122
NCBI-ProteinID:
XP_026139821
Ensembl:
ENSCARG00000024684
UniProt:
A0A6P6R2T5
LinkDB
All DBs
Position
16:10894055..10912226
Genome browser
AA seq
1423 aa
AA seq
DB search
MRSAMFLHVLLRAICLFVLSSSAILSPAADETTFLQVTIPDSPPVSAILGGSLTLPCLVS
LSRTPSFGRHAVLTQPRVKWSFLSSNKETEILVARGERVKVSELYKGRASLLNYAASSAD
LTLRLEELMHNDTGFYRCEVQHGLEDAHDQAQVKVKGVVFHYRNTSSRYAFTFDEAKDAC
EYIGAQIASPEQLLAAYRSGYEQCDAGWLSDRSVRYPIQMPREGCFGDMDGLPGVRNYGM
VDNDELYDVYCYVENIHGEVFHGSSQQRFNLSEAKTYCEQQGAQLATTGQLYAAWNDGLN
HCSPGWLADGSVRYPIVTPRERCGGSEPGVKTVYRFTNQTGFPEPQTQHDAYCFRANSNS
QTVSPRDHMATEPEDTEEHIVTLADPEEEYSVDQITQQSENEVQGAVESFSIYSTQTTSQ
PEEHNHSTRQEAVESFSIYSTQTTSQPEEHNHSTRQEAVESFSIYSTQTTSQPEEHNHST
RQEAVESFSIYSTQTTSQPEEHNHSTRQGAVESFSIYSTQTTSQPEEHNHSTRQGAFESF
SIYSTQTTSQPEEHNHTTSSQLDEDSTYRDSTIPTSTERYLESTEVTWQKIESVPEIYID
PKHIDFTQKGEPDIKASAVDGVKSSNHRHYQPMPDTNLQPGEPIDVIPPTEAQPETTEGT
SSQPKEINGSKHFQPMPETNLEDEDKDHVTSEISVTTEDTTLEYDLSKVTTTQRSSVKSS
PSTYLPEGATVEDNAGNITETPEPDEDWGLFTHTTQSTSTSASSTEGWLEGSGEDLTLFF
TEKAEHLVTSHKSETYGASAPETMTESFSLTHLNSISPTFTPRHEDTSADHHDAEEISTE
TLLVSLGAVDNASDYSTVSTSQKEPESSESSGDHDDILPVTLLTTPMPHLLGTSTTHGPV
QVEFNSPQEMEGVPSESTTPSGLGIVEEEFDKVEQDGLGEEPNQRIATSTELYKSTVNFS
IDGSDEEESSGEREPSGNRSSVINYPYSDVAIITPSNLTNMQDLNETNSEDDDDDVDDDN
QASTVESMKSLEVTFLPHGTQSPIWQNVASSTNPGEFRADVEFSGDAALTTDDIKALDES
DSTIAPINEKTTQTQKPSTMSANNEDDDDDDDYELMTKANADNTEDENYVKTTPESSTLP
ARPTQRVLVRTGYISDACLENPCKNGGTCVDSGAGHRCLCLPTYGGDFCETDLEHCEPDW
EKFQGFCYKHFTKRQKWEVAEQHCRMCGGHLVSVMSPEEQEFINDKYREYQWTGLNDKTI
EGDFHWSDGNPLLYENWYRGQPDSYFLSGEDCVVMVWYDDGRWSDIPCNYQLSYTCKKGI
AFCGQPPFVLHTKLFGRRQLKYRANSQVRYYCEPGFIQRQNPIITCQSNGQWEEPRITCS
PVGSAYSNGEPVTWPTGQNKEIIIEETTTKTTTREYVDIKWNF
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgagatcagcgatgttcctgcatgtactgctgcgtgccatctgcctcttcgtcttgtca
tcttctgccatcctcagtcctgcagcagatgagaccacattcttacaagtgaccattcca
gatagccccccagtgtctgccatcttggggggctccttgactctgccctgcttggtgagt
ctctcccggaccccatctttcggtcgacatgctgtactgactcagccacgagtcaaatgg
agctttctttcatcaaacaaagagacagagatcttagtggcccgtggtgagagggtaaag
gtgagtgagttgtataaaggcagggcatcgctgctgaattatgctgcctcttcagctgat
ctcaccctcagactggaggaactgatgcacaacgatacaggcttctaccgctgtgaagtc
cagcacggcttggaggatgctcatgaccaggcccaagtcaaagtaaaaggtgtcgtcttc
cattatcgcaatacctcaagtcgctatgccttcacttttgatgaggccaaagatgcgtgt
gaatatattggagctcagattgcttctccagaacagctgctggctgcgtaccgcagtggt
tatgaacagtgtgacgctggctggctttctgatcgctccgttagatacccaatccagatg
ccacgtgaagggtgttttggagacatggatggattaccaggcgttcgaaactatggcatg
gtggataatgatgaactatatgatgtgtactgctatgtggaaaacattcatggagaggtt
tttcatgggtcatcccaacagcgcttcaacttgtcggaagcgaagacatactgtgagcag
cagggagctcagctagccacaactggccaactgtatgccgcctggaatgatggtctgaac
cactgcagtcctggctggcttgctgatggaagcgttcggtaccccattgtgacccctcgt
gaacggtgtgggggttctgaacctggtgtcaagacagtttatcgttttaccaatcaaacg
ggattccccgaaccacaaactcagcatgacgcttactgcttcagagctaacagcaactct
cagacagtctcacctagagatcatatggcgacagagccagaggacaccgaggaacatatt
gtgactttagcagatcctgaagaggagtatagtgtggatcagatcactcaacagtcagaa
aatgaagtacagggggctgttgagtccttctccatttacagcacacagactacttcacaa
ccagaggaacacaaccacagcacaagacaggaggctgttgagtctttctccatttacagc
acacagactacttcacaaccagaggaacacaaccacagcacaagacaggaggctgttgag
tctttctccatttacagcacacagactacttcacaaccagaggaacacaaccacagcaca
agacaggaggctgttgagtctttctccatttacagcacacagactacttcacaaccagag
gaacacaaccacagcacaagacagggggctgttgagtctttctccatttacagcacacag
actacttcacaaccagaggaacacaaccacagcacaagacagggggcttttgagtctttc
tccatttacagcacacagactacttcacaaccagaggaacacaaccacaccacaagctct
cagttagatgaagatagcacctatagagactccaccatcccaaccagcacagagagatat
cttgagtccactgaggtcacctggcaaaaaattgagtctgttccagagatttacatagat
ccaaaacacatcgatttcacacaaaaaggagaaccagatataaaagcttcagcagttgat
ggtgttaaaagcagcaatcatagacactaccaaccaatgccagataccaacctacagccg
ggagagcccattgatgtcatcccacctacagaggctcagcctgagactacagagggaacg
tcctctcaaccgaaggagataaatgggtccaaacacttccaacccatgcctgaaaccaac
ctagaggatgaggataaagatcatgtgactagtgagatatccgtgaccactgaggatact
acactggaatatgacttaagcaaagtcaccacaactcagcgttcttcagttaagtcaagt
ccctcaacatacctacctgaaggtgctacagtagaagacaatgcaggaaatatcacagaa
actccagagccggatgaagactggggtctttttacacacacaactcagtccacatcaaca
agcgcatccagcactgaaggttggttggagggttcaggtgaggatttgaccttgtttttc
acggaaaaggccgaacatctggtcacctcgcataaatcagagacatatggagcttcagca
cctgagactatgacagagagcttctcattaacacatctgaacagtattagcccaactttt
acacccagacatgaagacacttctgcagaccatcacgatgctgaggagatctcaactgag
acccttcttgtgtctcttggtgcagttgataatgccagtgattattcgaccgtgagcacg
tcacagaaggagcctgaatcttctgaaagttctggcgatcatgatgacatcctgccagtc
acacttttgaccaccccaatgcctcacctgttgggaacatcaaccacacatgggcctgta
caggtagaattcaattctccacaggaaatggaaggtgtcccctctgaaagcacaactcca
tctggccttgggatagtagaagaagaatttgataaagtggagcaggatgggcttggagag
gaacctaatcaacgaatcgccacatccactgagctttataagtctactgtaaattttagc
attgatggcagtgatgaggaagagtcttccggagaaagagaaccttcaggaaacaggtct
tcagttattaattatccatactcagatgtggccatcatcactccctctaatctgacaaat
atgcaagaccttaatgaaacaaatagtgaggatgatgatgatgatgttgatgatgataat
caggccagcactgtggaatccatgaaaagtctggaggttacatttcttcctcatgggacc
caaagtcccatctggcaaaatgtggcatcatccacaaacccaggagagttcagagcagat
gttgaattcagtggggacgcagcacttaccacagatgacatcaaggccttagatgaatct
gactccaccattgcacccatcaatgagaaaacaacgcaaacccaaaaaccatccactatg
tcagccaacaatgaagacgatgatgacgatgatgattatgaactcatgactaaagcaaac
gcagacaatacagaagatgagaattatgtcaaaaccacacctgagtcttccactctacct
gccagacccacacagagagtgctggtcaggacaggctacatttcagatgcatgtctggag
aacccttgtaaaaatggaggcacctgtgtggacagtggagcaggtcacaggtgtctctgt
ctgccaacttatggaggagacttttgcgagacagatctagagcactgtgaaccagactgg
gaaaagttccaagggttttgttacaaacattttacgaaacggcagaaatgggaggtggca
gagcagcactgtcgcatgtgcggaggtcacctggtctctgttatgtcacctgaggaacag
gagtttatcaatgataaatacagggagtatcagtggacgggtctcaatgacaaaaccatt
gaaggagatttccactggtcagatgggaaccctctgttgtacgagaactggtatcgtgga
caaccagacagctacttcctgtcaggagaagattgtgttgtcatggtgtggtacgatgat
gggcgttggagtgatatcccttgtaactaccagctgtcctacacatgcaagaagggcatt
gcattctgtgggcagccccctttcgtactgcacactaaattgtttggacgtcgtcaacta
aagtatagggccaattcacaggtgcgctactactgtgagccaggcttcatccagagacaa
aaccctattatcacatgtcagagcaatggacagtgggaggagcctaggatcacttgctca
ccagtgggatcagcatactcaaatggagaaccggtaacatggcccacaggtcagaacaag
gaaataatcatagaggagacaacaacaaaaacaacaacaagagaatatgtggatataaaa
tggaacttttag
DBGET
integrated database retrieval system
