Carassius auratus (goldfish): 113116136
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Entry
113116136 CDS
T07313
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K03145
transcription elongation factor S-II
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113116136
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
113116136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
113116136
NCBI-ProteinID:
XP_026139843
Ensembl:
ENSCARG00000027357
UniProt:
A0A6P6R282
LinkDB
All DBs
Position
16:11151925..11163625
Genome browser
AA seq
708 aa
AA seq
DB search
MTREEDLLRIAKKLDKMVSRNNMDGALDLLRELKDFNMTLKLLQDTRIGMSVNRIRKHCT
DEDVVNLAKILIKNWKKLLESAQNQKSERSNEVKNGNHPSKPSGSPNRTPPERESSPRRL
TMEFKPDLDSNKKLDEKHRREKCDAELRNEKREGEQKKEKQSINNKRERERRDALNRDHL
PSPMMLSSLPPKCPPVGEVKRERKDAPVDFFPPASIHSHPPLRRSSVDVKKERKDSQGPL
QSFLSKHPSIDGKKERRDAPHPFFPLHHHIHPPPIPIPKRSAEVKNERKDPPETLPPPAP
ILSSPPPPKRPSLEEPKERSEHLSAKEGLLPVNRKSVAKKAPDPNAPLPPLPFHLHPPQK
REMKKERKETAEPSAPLPPVPLHLQPPTPMKRPSLDAKKDKEKERKETSDPKRRTSEHNE
KDRKDTSDSKPLKRPSMKIEIERQDSTGSKKLHSRKLSLDGRRDSKDSTDSKSSHHLLKR
QSSEPKLERRDSTNSRSGSSPQAKKSNESKSKPETPKTPTTPTSPLSPSFSSSVGPLSPR
LQTGDPIRDKCIEMLTAALRTDDDYKDYGANCEGMAAELEDHIYQEIKATDMKYKNRVRS
RISNLKDPKNPNLRKNVLAGAIDLSRIAIMTAEEMASDELKQLRNVLTQEAIREHQMAKT
GGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaggaggacctgttgcggattgctaaaaaactagacaagatggtgtctaga
aataacatggatggagctctagatcttctaagagaattgaaagatttcaacatgacactg
aagcttcttcaggatacaagaatcggcatgtcagtcaacagaataagaaaacattgcacc
gacgaggatgttgtcaacttggcaaagatccttatcaaaaattggaagaagcttttagaa
tcggctcaaaaccaaaagtctgagaggtcaaatgaggtgaagaatggcaatcatccaagc
aagccatcagggtcccccaacaggacccctcctgagagagagtccagtccacgaaggtta
acaatggaatttaaaccagacttagactcgaacaagaaacttgatgaaaaacacagaaga
gagaaatgtgatgcagagctcaggaatgaaaaacgagaaggtgaacagaaaaaagagaaa
caatctataaacaataaaagggaacgagagaggagagatgcattgaacagggatcatctt
ccctccccaatgatgctttcatctctgcctcccaagtgtcctccggttggggaagtgaag
agggagaggaaagatgctcctgttgattttttccctcctgcttcaatccattcccaccct
cctctaagacgctcatcagtagatgtaaagaaagagagaaaagactctcagggtccttta
cagtcttttctcagtaaacatccctccatagatggaaagaaagaaaggagagatgcacct
catcctttctttcctcttcatcatcacattcatcctccacctattcctatccctaagcgt
tcagcagaggtgaagaatgaaaggaaagatcctcctgaaactttacctcctcctgctcct
atcctttcttctcctcctcctcccaaacgtccatctctagaagagcccaaagaaaggtct
gagcacctttcagctaaagagggtttgttgccagtgaatagaaaatcagtggcaaaaaaa
gcacctgatccgaatgccccgcttcctcctttaccttttcatctacatcctcctcagaaa
cgtgagatgaagaaagagagaaaagaaactgctgaacccagtgctcctcttcctcctgtt
cctctccatcttcagcctcctacacctatgaaacgtccctcattagacgcaaagaaagac
aaagagaaagaaagaaaagaaacatcagacccgaagcgacggacttctgaacacaatgag
aaagatagaaaagacacaagtgacagcaaaccactcaaaaggccatcaatgaagatcgag
attgagagacaagactctacaggttctaaaaagctccattctagaaagctcagcctggat
ggacggagagacagtaaggactctactgactccaagtcaagccatcaccttttgaaaaga
caatcaagtgaacctaaattggagaggagagattctactaactccaggtctggaagctca
cctcaggccaagaaatctaatgaaagcaagagtaaaccagagaccccaaagacgcccaca
acacccacaagccccctctccccgtcgtttagctccagtgtgggtcctttatctcctcgt
ctgcaaactggggatcccatcagggacaaatgcattgaaatgctgactgctgcgctacgt
acagatgatgactacaaagactatggggcaaactgtgagggcatggcagcagaactcgag
gatcatatctaccaggagataaaagccacagatatgaaatacaagaacagagttcgcagc
cgcataagtaacctcaaagatcccaaaaatcccaatctgcgtaaaaatgtcttagctgga
gccatcgatttgagccgcatcgccatcatgactgctgaggagatggctagtgatgaactg
aaacagttgagaaacgtgttgacccaggaggccatccgagaacatcagatggccaagact
ggaggaaccaccactgacctgctgcagtgtggcaagtgcaagaagaaaaactgcacctac
aaccaggtgcaaacccgcagtgctgatgaaccaatgaccacctttgtgttgtgcaatgaa
tgtggtaaccgctggaagttctgctaa
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