Carassius auratus (goldfish): 113116187
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Entry
113116187 CDS
T07313
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113116187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113116187
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113116187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
ARM_TT21_N
TPR_12
TPR_8
TPR_7
ARM_TT21
TPR_17
TPR_10
ANAPC3
TPR_MalT
SCAF11-like_C
Motif
Other DBs
NCBI-GeneID:
113116187
NCBI-ProteinID:
XP_026139946
Ensembl:
ENSCARG00000014565
UniProt:
A0A6P6R374
LinkDB
All DBs
Position
16:complement(13143777..13155729)
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AA seq
749 aa
AA seq
DB search
MAETGSDQVGDMKHDSISSPGVSDQEKEMASSAFEAFKAGSYDESLKQLDSLQELNKEDY
KITMNKAITDFYKSGQTTTSTLKQTLMTLKNQMHTAVDDIDGLDDVENSILYYNQAVIYY
HLRQYSEAISIGEKLYQFLEPFEEKFAQAVCFLLVDLYLLTFQPEKALHLLAVLEKLAVK
DGNSKNGKGESTSSTNKESTAMKAEFTALIEAAKSKMHQYKVRAYIQMKSLKACKREIKS
VMNTSVNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGPLKTGECVRCMFWNNLGC
IHFAMGKHNLGLFYFKKALQENDHICAQLGDGSNGQAAKKFTGIPMCALLANKRYELLYN
CGIQLLHIGRPLAAFECLMEAVQVYHSNPRLWLRLAECCITANKGSSEQETKGLPSKKGI
VQAVVGQGYHRKIVLASQSTQNTIYSEGQSAAIPVASMEFAAICLRNALLLLPEHQQHDS
KPDNVSKSCSLSGSTESGSETSDACSGKTQEGDKFIPAAPSSPLRKQEVENLRCSILACS
AYVALALGDNLMALNHAEKLLHQTKLSGSLKFLGHLYAAEALISLDRISDAIAHLNPENV
TDVSLGVTSSEQEQASDKADLEPVESSGKQTPLCYPSSVSSARATMLFNLGSAYCLRSEY
EKARKCLHQAASMVNTKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPSVRPASSPD
LCKKPLPFQSSQPVQPIQTPSSFTQVQRK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacaggctcagatcaagttggtgacatgaaacatgacagcatttcctcccct
ggggtctcagatcaggagaaggagatggcatccagtgcttttgaggcttttaaggctgga
agctatgacgagtccctgaaacagctcgacagcctccaggagcttaacaaagaggactac
aagataaccatgaataaagcgattactgatttttataaaagtgggcagacaacaactagc
accctgaagcagacgttaatgaccttgaagaatcagatgcacacagctgtggatgatatt
gacggtttggacgatgttgagaacagtatcctctactacaatcaagcggtgatttattac
cacctgcgacagtattcagaagctatatccatcggggagaaactctaccagttccttgaa
ccttttgaagaaaagtttgctcaggccgtgtgtttcttgttggtggatctatacctgctc
accttccagccagagaaggccctgcacctgttggctgtgctggagaagctcgctgtgaag
gatgggaacagcaaaaacggcaaaggagagagcaccagcagcacaaacaaggagtctact
gctatgaaagcagagttcacagctttgatcgaggccgctaaatcaaagatgcaccagtat
aaagtacgagcctatatccagatgaagtcactgaaggcctgtaaacgggaaatcaaatct
gtgatgaacacatctgtaaattctgcaccctcactcttcctgaagagtaattttgagtat
ttgaggggaaattatcgtaaagctgtgaaactcctcaacagttcaaatatcgcagagcac
ccaggacccttgaaaacaggtgaatgcgtgagatgtatgttctggaataatctcggttgt
atccattttgccatggggaagcacaacctgggtcttttttactttaaaaaagcacttcaa
gaaaatgaccacatatgcgcccagcttggtgatggcagtaatgggcaggcagctaagaag
ttcacaggcatccccatgtgtgctctgctagctaataagcgctatgagctgctgtataac
tgtgggattcagttacttcatatcggtcgaccgctggcagcgtttgagtgtctgatggag
gcggtgcaggtgtatcactccaaccctcgactctggctcaggctcgcagaatgctgcatc
acagctaataaagggagctcggagcaggaaacaaaaggtttgcccagtaaaaaggggatt
gtgcaggctgttgttgggcagggctatcatcgcaagatcgttttagcatcacagtcaacg
caaaacaccatttacagtgagggccagtctgcagcaatcccagtggccagtatggagttt
gcagcgatctgtctgcgtaacgctttgctcctgctcccagagcaccaacagcacgacagc
aaacctgacaatgtctctaagagctgcagtctgtcaggcagcacagaaagtggcagtgag
accagcgatgcctgcagtgggaagactcaagagggagacaagttcattcctgctgccccc
tcatcgcccttgaggaagcaagaggtggagaatctcaggtgctcaattctagcctgcagt
gcgtatgtggctcttgctcttggggacaacttaatggctcttaaccatgcagaaaagctc
ctgcatcagacaaagctttcaggatccctcaagttcctgggtcatctatatgcagctgaa
gccctgatctctctggacagaatttctgatgccatcgcacatctcaacccggagaacgtt
actgacgtctccttaggggtgacatccagcgaacaagagcaagcttctgataaagcagat
ctggagcctgtggagtcctcagggaagcagacgcctttgtgttaccccagctcagtgagt
tctgcccgggccacaatgctcttcaatctgggcagtgcgtattgcttgaggagcgagtac
gagaaagcccgcaagtgcctccatcaggctgcttcaatggtgaacactaaggagattcct
ccagaagccattttactgggcgtctacttagaactgcagaacggaaacacacagctggcg
ctacagatcatcaaaaggaaccagctcctcccgtctgtcaggcccgcctcctcccctgac
ctctgtaagaaaccacttcccttccagtcatcccagccggtacagcccatacagaccccc
tcctcctttacacaagtgcagcgcaagtga
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integrated database retrieval system
