Carassius auratus (goldfish): 113116216
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Entry
113116216 CDS
T07313
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113116216
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
caua03310
]
113116216
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
113116216
Nuclear receptors [BR:
caua03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
113116216
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CTNNB1_binding
Motif
Other DBs
NCBI-GeneID:
113116216
NCBI-ProteinID:
XP_026140015
Ensembl:
ENSCARG00000019672
UniProt:
A0A6P6R4R6
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Position
16:complement(14339753..14385815)
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AA seq
554 aa
AA seq
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MENDEPASPDPIHDSTQSKRGSPVHKKSHLTQIEVIPCKICGDKSSGVHYGVITCEGCKG
FFRRSQSSSVQYSCSRQSNCPIDRASRNRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDS
LFAEVERHRQQQRLQANSVHEPQPLPAYRSSKEPREQSSHLIPPLPPAYPYSVEPELQGC
PPEMHPYLDCRIGKAQAQSLAYRGSHRRGDSNSLSAGRGYDSTRSTPEAILNMSGSEMGI
RPFDPESSFFSYPASLHIGHKLKYFDAFRELSEPPIDSKDPYLIKIQNCVLKMSEGLTVL
ERHEEELSASIVRSHRETTQYRPEELQALRWKVFSREEIHAYQSKSVDEMWQHCAVRLTD
AVQYVVEFAKRIPGFRQLCQNDQIALLKSGSMEVVLVRMSRMFNTENNTVFFDGKFAGTE
LFKSLACSDLIAAVFEFAHNLCVLRLTEQQMAVFTALVLLNAVDRPCLEDRERVQRARRD
VGLALSHILHRDNQGSLQHKLFQRVQELESLCALHIEKLRWFRQLYPLTVHSLFPPLYKE
LFGSDTDTQTLTTH
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgatgagcctgcatcaccggacccgatccatgacagcactcagagtaaaaga
ggaagtccagtgcacaagaaatctcatctaactcagattgaggtgatcccatgtaagatc
tgtggagacaagtcatccggggttcattatggagttatcacttgtgagggctgcaagggc
ttcttccgcagaagtcagtcctccagtgtgcagtactcctgctccagacagagcaactgt
cctattgaccgcgccagccgcaaccgctgccagagctgccgtctcaaaaaatgtgtcgct
cagggaatgagccgtgatgcggtgaagtttggccggatgtctaagcgccagagagactct
ctgtttgcagaagttgagagacaccggcagcagcagcgtcttcaggccaactcagtccat
gagccccagcctcttccagcctaccgatccagcaaagagcccagagaacagtcatcacat
ctcatcccacctcttcctccagcttacccttactctgtagagcctgaactgcaaggctgc
cctccagagatgcatccatacctggattgtcgcataggcaaggcccaggctcagagtctg
gcctacaggggctcccacaggagaggtgacagcaacagcttgtcagctgggagaggatat
gactccacaaggtctacaccagaggctattctgaacatgagcggtagtgaaatgggcatt
cgtccttttgatcctgagagctcgttcttttcttaccccgcatctctacacataggacac
aaattaaaatatttcgatgccttccgagagctctctgagcctcccatagacagcaaggat
ccttacttgatcaagattcagaattgtgtcctgaagatgagtgaaggtcttacagttttg
gaacgacatgaggaggagctctctgcaagtatcgttcgttcccacagagagacgactcag
tatcgaccggaggagctgcaggctctcagatggaaggttttcagcagggaggagatccac
gcttaccagagcaaatcggtggatgagatgtggcagcactgtgcggtgcgtttgaccgat
gctgttcagtacgtggtggagtttgctaaacgtatccccggatttcgtcagctttgtcaa
aatgatcaaattgctctcctcaagagtgggtccatggaagtggttctggtccggatgagt
cggatgtttaacacagaaaacaacacagtattctttgacggcaaatttgctggaacagaa
cttttcaaatcccttgcatgtagtgatctgatagctgctgtatttgaatttgctcacaat
ctgtgtgtgctgagactgactgaacagcagatggccgtgttcactgcgctggtcctcctc
aatgcagtagatcgaccgtgtctggaggacagagaacgagtgcagagagccaggagagat
gtggggcttgccctcagtcacattctgcacagagataatcaggggagtctgcagcataag
ctgtttcaaagagtccaggagctggagtctctgtgtgcactgcacattgagaaactgcga
tggttccggcagctttaccctctcacggtgcattccctcttccctccgctatacaaagag
ctgttcggctctgacacagatacacagacactgactactcattga
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