KEGG   Carassius auratus (goldfish): 113116236
Entry
113116236         CDS       T07313                                 
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    113116236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:caua03009]
    113116236
Enzymes [BR:caua01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     113116236
Ribosome biogenesis [BR:caua03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    113116236
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 113116236
NCBI-ProteinID: XP_026140050
Ensembl: ENSCARG00000020632
UniProt: A0A6P6R4V5
LinkDB
Position
16:14620081..14622519
AA seq 238 aa
MAARAGDKRGLEHLDEYDPKQAKQQKSLHEQMTEKRLVVVLEGATLETVKVGKTFELLNC
DQHKSMIIKSGRDPGKIRPDITHQCLLMLLDSPLNRAGLLQVYIHTEKNALIEINPQTRI
PRTFARFCGLMVQLLHKLSVRAADGPQRLLRLIKNPVSDHLPAGCPRYSTSFKAGDAVCP
RTIVPKDGPAAVVIGAFAHGAVNIDYTEKTVSISNYPLSAALTCAKMCSAFEEVWGVL
NT seq 717 nt   +upstreamnt  +downstreamnt
atggccgcacgcgctggagacaagcgtggtctggagcatttagatgaatatgacccaaaa
caagcaaaacagcaaaaaagcttgcacgaacagatgacggaaaagcgtcttgttgttgtt
ttggaaggagcgacgcttgaaaccgtaaaggttggaaagacatttgagttgctgaactgt
gatcaacataagagtatgatcataaaaagcggaagagaccctgggaagattcgtcctgac
atcactcatcagtgcctgttgatgttactggacagtcctctgaacagagctggactgctt
caagtctacattcacacagagaagaacgctttgatcgagatcaacccacagacgagaatt
cctcgcacttttgcacgattttgtggactaatggtccagctgctgcacaagctgagcgtg
agagcagcagatggtcctcaacgcttgttaaggctgattaaaaatccagtgtcggatcac
ctgccagctggatgcccccgatattcgacgtcgttcaaagcaggagatgctgtgtgtccc
cgaacaatcgtccctaaagatggacctgccgctgttgtcattggagcgtttgcacatgga
gcagtgaatatcgactacaccgagaagacggtgtccatcagtaactatcctctgtctgca
gctctgacctgtgctaagatgtgttcagcgtttgaagaggtttggggagtgttatga

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