Carassius auratus (goldfish): 113116238
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Entry
113116238 CDS
T07313
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113116238
Enzymes [BR:
caua01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
113116238
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113116238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
TRM5-TYW2_MTfase
PCMT
BSP_II
FtsJ
Motif
Other DBs
NCBI-GeneID:
113116238
NCBI-ProteinID:
XP_026140052
Ensembl:
ENSCARG00000020653
UniProt:
A0A6P6R4A9
LinkDB
All DBs
Position
16:14624576..14631406
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AA seq
735 aa
AA seq
DB search
MGRRLDPTTKVKRGPGRKARKQKGAETELNKFLVDEDGPKKLSSRARKRAVKRAQVTKEP
KQEEKPKKGFSDENNKWLKPAQRKRKIEQSEEGEDSDSQWEEEDDDDDNEEGLNNKEMEE
EDDDDEDMVDDYGADEGNDQDSDGEELLPIEKAARKQKKQAGVKPESDDDDDDDEEEEEE
EEEKEDLKEDEDEEDTVQANIDETEQFKLPGAADRAKEGLLAMDLQTIHQRIKDNVDVLS
HFSEKREEGKERSEYLSLLRSDLCTYYSYNEFLISKLMDLFPLSELIDFLEANEIQRPVT
IRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIYDSSVPIGATPEYLAGQYMLQGA
SSFLPVMALSPQEGESVLDMSSAPGGKTTYMAQLMRNTGMIVANDANADRLKSVVGNIHR
LGVTNAVICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPGVKTGKDEADILRSAHLQ
KELILSAIDSVNADSPTGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVPTGLDFGNEGF
TRFKEKRFHPSLKLSRRFYPHSQNMDGFFVAKLKKLSNTIPTAPKETGDEAESTKMETAA
SSEQVQKPESKQQKPTSNPEKSKMGKKQKLKQKKSEPAIITKKAGVKSENKKSDGPKGAK
IPKLDEAASKKSEKPDKKQKVKELNGDSTKEVGKEKKEKSQLEKKKNKMQRKKLLKNKNR
MGKNKFRKLKNVLGH
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaaggttggaccccaccaccaaggtgaaaagaggacctggacgtaaggccaga
aaacagaagggagcagaaactgagctgaacaagtttttggttgatgaggatgggccaaaa
aaactttcaagcagagcgagaaaacgagctgtaaaaagagcccaagtaactaaagaaccc
aaacaagaggaaaagcctaagaaaggattctcagatgagaataataaatggcttaaacca
gcacagaggaagcgaaagattgaacaatctgaagaaggtgaagacagtgacagccaatgg
gaagaagaagatgatgatgatgataatgaagagggcttaaataacaaggaaatggaggaa
gaggatgatgacgatgaagatatggtggatgactatggtgctgatgaaggcaatgatcaa
gacagcgatggagaagagcttctgccaattgagaaagctgcaagaaaacagaaaaaacaa
gcaggcgtgaaaccagagagtgatgatgatgatgatgatgatgaggaggaggaggaggag
gaagaagaaaaggaagatttaaaggaagatgaggatgaagaggatactgtacaggcaaat
attgacgaaactgaacaattcaaactcccaggtgcagcagatcgagcgaaggagggtctt
ttagcgatggacctacagaccatccatcagaggatcaaagataatgtggatgtgctgtct
cacttcagtgagaagagagaagagggtaaagagagatcggagtatctctctctgctgcgc
tctgacctctgcacctactacagctacaacgagttcctcatcagcaaactcatggacctt
ttcccactctctgagctgattgattttcttgaggccaatgaaattcagaggccggtcacc
atcagaaccaacaccctgaaaaccaggaggagagacttggctcaggctctgattaacaga
ggagtgaacctggatccattggggaaatggtccaaagtgggcctggttatatatgactct
tctgttcccataggagcaactcctgaatatctggcaggccagtacatgttgcaaggtgca
tcatcgtttctgcctgtaatggcgctttcgccccaggagggggagtcagtgctggacatg
agctccgctccaggaggcaagaccacttatatggctcagctcatgaggaacacaggcatg
attgtggctaatgacgcaaatgcagacagactgaagagcgtggtgggaaacatccatcgt
ctcggtgtcactaacgcggtcatctgcaactatgacggcagacagttccccaaggtgatg
ggaggtttcgatagagtgcttttagatgctccttgctcgggtaccggagttatctctaaa
gatccaggagtaaaaaccggcaaggatgaggctgatattcttcgctcggctcacctgcag
aaggagctcatcctgtctgcaatcgactctgtcaatgctgattctccaactggcggatac
cttgtttactgcacatgctctattatggtagaggagaatgagtgggtggtggactatgct
ttgaagaagagaaatgtaaagctggtccccactggactagactttggcaacgagggattc
accagattcaaagaaaaacgtttccatccctctcttaaactctctcgccgattctaccct
cactcccaaaacatggatggattttttgtggccaagctaaagaagctgtctaacaccatc
cccactgccccaaaagaaacaggagatgaagcagaatctactaaaatggagaccgcagcc
tcatccgagcaggtccagaaaccagaatctaagcaacagaagcccacttcaaatccagag
aaaagcaagatgggcaagaagcagaaattaaaacagaagaaatctgagccggccatcatc
acaaagaaagccggagtgaaatctgagaataaaaaatctgatggtcccaaaggggccaaa
atcccaaagttggatgaagcagcatccaaaaagagcgagaagcctgacaaaaagcagaag
gtaaaggaactgaatggagattcaacaaaagaggtagggaaggagaagaaagagaaaagc
cagttggagaaaaagaaaaacaaaatgcaaaggaagaaattgttgaagaataaaaacaga
atggggaaaaacaagtttaggaagttaaaaaatgtgcttggacactga
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