Carassius auratus (goldfish): 113116325
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Entry
113116325 CDS
T07313
Name
(RefSeq) integrin alpha-10-like
KO
K06586
integrin alpha 10
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04810
Regulation of actin cytoskeleton
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113116325
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113116325
09142 Cell motility
04820 Cytoskeleton in muscle cells
113116325
04810 Regulation of actin cytoskeleton
113116325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113116325
Cell adhesion molecules [BR:
caua04515
]
Integrins
Integrin alpha subunits
113116325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
VWA_2
Integrin_A_Ig_3
ITGAX-like_Ig_3
FG-GAP_2
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
113116325
NCBI-ProteinID:
XP_026140200
Ensembl:
ENSCARG00000044418
UniProt:
A0A6P6R592
LinkDB
All DBs
Position
16:16737566..16772661
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AA seq
1171 aa
AA seq
DB search
MEIQKYLLLLNITVLLKGLCECFNIDVKRPRIFSGPEDALFGFSVLQHENNGEKSILVGA
PWDGPQNNRKGDIYKCIVGDETNSNCSKVNLGENAFQNVSRNLKNSHLGMTLTPAASDGF
LACAPLWSQECGTSLFSTGICASVTNDMEPKEIIAPTAQRCTTYMDIVIVLDGSNSIYPW
FEVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLRDYQTTQDVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSPDRGAREGATKVMIVVTDGESHDGEDLPDSLAECEKRNITRYA
IAVLGHYIRRQQDPETFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESAFLMEMSQIGFSTHILDDGILFGMVGAYDWEGGVLKESKEGQLKPSREAFEKEFP
LELKNHAAYLGYTVSSVTVGDWKRLYVAGAPRFKHKGKVILFDLTPEADVIITQALNGEQ
IGSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYVYCLDGDGFAPNGTLQSQ
KKAQDARFGYAMAVAPDLNHDGYADLLVGAPLEDDHQGALYIYHGDEFYIIPQYKQRIPG
SSLSAGLQYFGRSLSALLDLDGDELLDIAVGAQGNAVLLKSRSIVQINVSLSFQPHSINV
IQKNCHRAGRDSACLNATVCFLALSRSPGSYGTTFDMQMGAMLDDRKILARALFDYNSQR
QTLMGVTVRVGQTMCKTLPFHVFDTADYIRPISFTLRFKINDTESGPVLDEGWPTTFKKS
IQFFKDCGEDDVCVTDLVLQAHMDISGTKEQPYVIRSPRRRLAVEVQLQNQLENAYNTSL
TLHYSKNLHFSSLSIREDAQFKIECTALSSNSHSCNVSYPVFRSQSKVNFMLEFEFSCTS
LISKVQMKLNASSDSVEREGTRSDNIVQLQSIVQYEPDLFITSDSNLNRYEVHPTRTVSE
GTGPEFYTHFRVQNLGCYAVSNLELIVNLPAVASGDRVFATVVDAFSYNSSGVNCTILGD
LSKLKSSQRDVRPLHPEDMKKAELLNCSSSWCVEVVCHIQQLLKGQTALIRITRRIHDNF
FRQAKFKAVTIVGSYQLSARESNLITMGNAALLRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALLVFILWKLGFFTRKQRKDEDENDDN
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggagattcagaagtacctgctgctgttgaatatcactgttcttctcaaagggctgtgt
gagtgttttaatattgatgtgaagaggccacggatcttcagtgggcctgaagatgctctg
ttcggcttctctgtgttacagcatgagaacaatggagagaaatcaatcctggttggtgct
ccatgggatggaccacaaaataacaggaagggggatatttacaagtgcattgtgggagat
gagacaaattccaattgttcaaaagtcaacctaggtgaaaatgcatttcagaacgtgtct
cgaaatcttaaaaactctcatttggggatgacgctaacccctgctgcttcagatggcttc
ctggcctgcgctccactatggtcccaggaatgtggtacatctctgttcagcacaggaatc
tgtgcctctgtcaccaatgacatggagcccaaggagatcattgcacccactgcgcagaga
tgcaccacatacatggatatagtgattgttttagatggttctaatagtatctacccttgg
ttcgaagtgcagaactttcttagcaacattctcagcaagttccacataagccctgaacaa
atgcaggtaggtgtcctgcagtacggcgagatctcagtccatgagtggtctctcagggac
tatcagacaacacaggatgtggttgaagccgccaaaaacatcagtcgtcaagagggacgg
gagacccgcacagcatacgccatccaaatggcctgcactgaggcctttagtccagacaga
ggagcgagagaaggggccactaaagtgatgatagtcgtgacagatggagagtcccatgat
ggtgaagaccttcctgattccttggctgaatgtgagaaacgtaacatcaccagatacgcc
atcgccgtattaggtcactacatccgcagacagcaagatccagagacctttatcaatgaa
attaagtacattgccagtgaccccgatgagaaatacttcttcaatgtgacggatgaggct
gctctaaatgacattgtagatgcattgggggatcgcatttttagtctagaggggaccctg
ggatacaatgaaagtgcctttctcatggagatgtctcagattggtttttcaacacacatt
ttagatgatggcatcctgtttggcatggtgggtgcatatgactgggagggaggcgtcctg
aaggagagcaaagaagggcagctcaagccctcaagagaggccttcgagaaagagttccca
ctggagctgaagaatcacgctgcctacttaggttacacagtgtcatcggtgactgtaggt
gactggaagaggttgtatgttgctggtgcacctagattcaagcacaaaggaaaggtcatc
ctgtttgacctcacccctgaagcagatgtcataatcacacaagccctaaacggagaacag
attggctcttattttggcagtgaggtgtgcgtggtggatgtggatcaggacggaataaca
gacatcctgctcatagctgctcccatgttcctgggagcaggaaacaaagaaacaggcaaa
gtctatgtctactgtctggatggggatggttttgctcctaatggtacactacagtctcag
aagaaagcacaggatgcacgctttggttatgctatggctgtggcccctgaccttaaccat
gacggatacgctgacctgcttgtgggagctccgctggaggatgaccaccagggagctctt
tacatctaccacggagacgaattctacatcatacctcagtataaacaacgtatcccaggc
tcctctctctctgcagggctgcagtattttggccgtagcctgagcgctctgctggatctg
gatggggatgagttactggatattgctgtgggagcacagggcaatgccgtcctactgaag
tcacgcagtatagtgcagatcaacgtcagcctgtccttccagccacactccataaacgtg
atacagaagaactgccaccgggctggacgagactccgcgtgccttaacgccacagtttgc
tttctggccctgtctcgctctcctggctcttatggcacaacttttgatatgcagatgggg
gccatgttggatgacagaaagatcttggctcgtgctctgtttgactacaactcccagcgg
cagaccctaatgggcgtcactgttcgtgtagggcagaccatgtgcaaaacgctaccattt
catgtctttgatacagctgattacatccgaccaatcagtttcactttgcgcttcaaaatc
aatgacacagaaagcggcccggtactagatgagggctggccgacaacattcaagaagtct
atccaattcttcaaagactgtggggaggatgatgtgtgtgtaacggatctggttttacaa
gcccatatggacatttctggaacaaaggagcaaccgtatgttatacgcagccctcggcga
cgacttgcagtagaagtgcagctacaaaaccagctagaaaacgcctataacactagcctc
actcttcattactctaaaaacctgcacttcagcagtctgagtatacgggaagacgcccag
tttaagattgaatgtacggctctaagctcaaacagtcactcctgtaatgtcagttaccca
gtgttccgctctcagtccaaggtgaacttcatgttggaatttgagttcagttgtacgtct
ctcatcagcaaggtccagatgaagcttaatgcttcaagtgacagtgtggagagggaaggc
acacgttcggacaacattgtacagttacagagtattgtacagtatgaaccagatctcttc
atcacaagtgactccaacttaaaccgctatgaggtccacccaaccagaaccgtgtctgag
gggacaggacccgagttctacacacatttcagggtgcagaatctaggctgttatgctgtc
agtaatctggagctgattgtcaatttgcccgctgtggcttcaggagacagagtttttgcg
actgtggttgatgctttctcttataattcttcaggtgtgaactgcactatactgggtgat
ctatccaagttaaagtccagccagagagatgtgcgtccacttcacccagaagacatgaag
aaagctgaactactgaactgctcatcctcgtggtgtgtggaggttgtgtgtcacatccaa
cagctactgaaaggacagacagccttgatccgcatcaccaggaggatacatgacaacttc
ttcagacaggccaagtttaaagcggtgacaatagtgggctcttaccagctgtctgctcga
gagtccaatctgattacaatgggaaatgctgccctcttgagggagacggttttggaagtg
ctgaaggggcgttccattccaatctctctctggattctgattggcagcatcattggagga
ctgctgcttcttgcactcttggtattcatcctttggaagttggggtttttcacaaggaaa
cagaggaaggatgaggatgagaatgatgacaactga
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integrated database retrieval system