KEGG   Carassius auratus (goldfish): 113116325
Entry
113116325         CDS       T07313                                 
Name
(RefSeq) integrin alpha-10-like
  KO
K06586  integrin alpha 10
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04510  Focal adhesion
caua04512  ECM-receptor interaction
caua04810  Regulation of actin cytoskeleton
caua04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113116325
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113116325
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113116325
   04810 Regulation of actin cytoskeleton
    113116325
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:caua04515]
    113116325
Cell adhesion molecules [BR:caua04515]
 Integrins
  Integrin alpha subunits
   113116325
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP_3 VWA_2 Integrin_A_Ig_3 ITGAX-like_Ig_3 FG-GAP_2 vWA_SIBA-E
Other DBs
NCBI-GeneID: 113116325
NCBI-ProteinID: XP_026140200
Ensembl: ENSCARG00000044418
UniProt: A0A6P6R592
LinkDB
Position
16:16737566..16772661
AA seq 1171 aa
MEIQKYLLLLNITVLLKGLCECFNIDVKRPRIFSGPEDALFGFSVLQHENNGEKSILVGA
PWDGPQNNRKGDIYKCIVGDETNSNCSKVNLGENAFQNVSRNLKNSHLGMTLTPAASDGF
LACAPLWSQECGTSLFSTGICASVTNDMEPKEIIAPTAQRCTTYMDIVIVLDGSNSIYPW
FEVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLRDYQTTQDVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSPDRGAREGATKVMIVVTDGESHDGEDLPDSLAECEKRNITRYA
IAVLGHYIRRQQDPETFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESAFLMEMSQIGFSTHILDDGILFGMVGAYDWEGGVLKESKEGQLKPSREAFEKEFP
LELKNHAAYLGYTVSSVTVGDWKRLYVAGAPRFKHKGKVILFDLTPEADVIITQALNGEQ
IGSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYVYCLDGDGFAPNGTLQSQ
KKAQDARFGYAMAVAPDLNHDGYADLLVGAPLEDDHQGALYIYHGDEFYIIPQYKQRIPG
SSLSAGLQYFGRSLSALLDLDGDELLDIAVGAQGNAVLLKSRSIVQINVSLSFQPHSINV
IQKNCHRAGRDSACLNATVCFLALSRSPGSYGTTFDMQMGAMLDDRKILARALFDYNSQR
QTLMGVTVRVGQTMCKTLPFHVFDTADYIRPISFTLRFKINDTESGPVLDEGWPTTFKKS
IQFFKDCGEDDVCVTDLVLQAHMDISGTKEQPYVIRSPRRRLAVEVQLQNQLENAYNTSL
TLHYSKNLHFSSLSIREDAQFKIECTALSSNSHSCNVSYPVFRSQSKVNFMLEFEFSCTS
LISKVQMKLNASSDSVEREGTRSDNIVQLQSIVQYEPDLFITSDSNLNRYEVHPTRTVSE
GTGPEFYTHFRVQNLGCYAVSNLELIVNLPAVASGDRVFATVVDAFSYNSSGVNCTILGD
LSKLKSSQRDVRPLHPEDMKKAELLNCSSSWCVEVVCHIQQLLKGQTALIRITRRIHDNF
FRQAKFKAVTIVGSYQLSARESNLITMGNAALLRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALLVFILWKLGFFTRKQRKDEDENDDN
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggagattcagaagtacctgctgctgttgaatatcactgttcttctcaaagggctgtgt
gagtgttttaatattgatgtgaagaggccacggatcttcagtgggcctgaagatgctctg
ttcggcttctctgtgttacagcatgagaacaatggagagaaatcaatcctggttggtgct
ccatgggatggaccacaaaataacaggaagggggatatttacaagtgcattgtgggagat
gagacaaattccaattgttcaaaagtcaacctaggtgaaaatgcatttcagaacgtgtct
cgaaatcttaaaaactctcatttggggatgacgctaacccctgctgcttcagatggcttc
ctggcctgcgctccactatggtcccaggaatgtggtacatctctgttcagcacaggaatc
tgtgcctctgtcaccaatgacatggagcccaaggagatcattgcacccactgcgcagaga
tgcaccacatacatggatatagtgattgttttagatggttctaatagtatctacccttgg
ttcgaagtgcagaactttcttagcaacattctcagcaagttccacataagccctgaacaa
atgcaggtaggtgtcctgcagtacggcgagatctcagtccatgagtggtctctcagggac
tatcagacaacacaggatgtggttgaagccgccaaaaacatcagtcgtcaagagggacgg
gagacccgcacagcatacgccatccaaatggcctgcactgaggcctttagtccagacaga
ggagcgagagaaggggccactaaagtgatgatagtcgtgacagatggagagtcccatgat
ggtgaagaccttcctgattccttggctgaatgtgagaaacgtaacatcaccagatacgcc
atcgccgtattaggtcactacatccgcagacagcaagatccagagacctttatcaatgaa
attaagtacattgccagtgaccccgatgagaaatacttcttcaatgtgacggatgaggct
gctctaaatgacattgtagatgcattgggggatcgcatttttagtctagaggggaccctg
ggatacaatgaaagtgcctttctcatggagatgtctcagattggtttttcaacacacatt
ttagatgatggcatcctgtttggcatggtgggtgcatatgactgggagggaggcgtcctg
aaggagagcaaagaagggcagctcaagccctcaagagaggccttcgagaaagagttccca
ctggagctgaagaatcacgctgcctacttaggttacacagtgtcatcggtgactgtaggt
gactggaagaggttgtatgttgctggtgcacctagattcaagcacaaaggaaaggtcatc
ctgtttgacctcacccctgaagcagatgtcataatcacacaagccctaaacggagaacag
attggctcttattttggcagtgaggtgtgcgtggtggatgtggatcaggacggaataaca
gacatcctgctcatagctgctcccatgttcctgggagcaggaaacaaagaaacaggcaaa
gtctatgtctactgtctggatggggatggttttgctcctaatggtacactacagtctcag
aagaaagcacaggatgcacgctttggttatgctatggctgtggcccctgaccttaaccat
gacggatacgctgacctgcttgtgggagctccgctggaggatgaccaccagggagctctt
tacatctaccacggagacgaattctacatcatacctcagtataaacaacgtatcccaggc
tcctctctctctgcagggctgcagtattttggccgtagcctgagcgctctgctggatctg
gatggggatgagttactggatattgctgtgggagcacagggcaatgccgtcctactgaag
tcacgcagtatagtgcagatcaacgtcagcctgtccttccagccacactccataaacgtg
atacagaagaactgccaccgggctggacgagactccgcgtgccttaacgccacagtttgc
tttctggccctgtctcgctctcctggctcttatggcacaacttttgatatgcagatgggg
gccatgttggatgacagaaagatcttggctcgtgctctgtttgactacaactcccagcgg
cagaccctaatgggcgtcactgttcgtgtagggcagaccatgtgcaaaacgctaccattt
catgtctttgatacagctgattacatccgaccaatcagtttcactttgcgcttcaaaatc
aatgacacagaaagcggcccggtactagatgagggctggccgacaacattcaagaagtct
atccaattcttcaaagactgtggggaggatgatgtgtgtgtaacggatctggttttacaa
gcccatatggacatttctggaacaaaggagcaaccgtatgttatacgcagccctcggcga
cgacttgcagtagaagtgcagctacaaaaccagctagaaaacgcctataacactagcctc
actcttcattactctaaaaacctgcacttcagcagtctgagtatacgggaagacgcccag
tttaagattgaatgtacggctctaagctcaaacagtcactcctgtaatgtcagttaccca
gtgttccgctctcagtccaaggtgaacttcatgttggaatttgagttcagttgtacgtct
ctcatcagcaaggtccagatgaagcttaatgcttcaagtgacagtgtggagagggaaggc
acacgttcggacaacattgtacagttacagagtattgtacagtatgaaccagatctcttc
atcacaagtgactccaacttaaaccgctatgaggtccacccaaccagaaccgtgtctgag
gggacaggacccgagttctacacacatttcagggtgcagaatctaggctgttatgctgtc
agtaatctggagctgattgtcaatttgcccgctgtggcttcaggagacagagtttttgcg
actgtggttgatgctttctcttataattcttcaggtgtgaactgcactatactgggtgat
ctatccaagttaaagtccagccagagagatgtgcgtccacttcacccagaagacatgaag
aaagctgaactactgaactgctcatcctcgtggtgtgtggaggttgtgtgtcacatccaa
cagctactgaaaggacagacagccttgatccgcatcaccaggaggatacatgacaacttc
ttcagacaggccaagtttaaagcggtgacaatagtgggctcttaccagctgtctgctcga
gagtccaatctgattacaatgggaaatgctgccctcttgagggagacggttttggaagtg
ctgaaggggcgttccattccaatctctctctggattctgattggcagcatcattggagga
ctgctgcttcttgcactcttggtattcatcctttggaagttggggtttttcacaaggaaa
cagaggaaggatgaggatgagaatgatgacaactga

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