KEGG   Carassius auratus (goldfish): 113116360
Entry
113116360         CDS       T07313                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113116360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:caua03041]
    113116360
Spliceosome [BR:caua03041]
 Complex A
  U2 snRNP components
   U2 related factors
    113116360
 Complex B
    113116360
SSDB
Motif
Pfam: RRM_1 Transformer RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 113116360
NCBI-ProteinID: XP_026140260
Ensembl: ENSCARG00000028460
UniProt: A0A6P6R451
LinkDB
Position
16:complement(17275865..17283315)
AA seq 481 aa
MSDFDEFERQLTENKQADRDKENKHHRRSGSRSRSRDQDRKRRSRDRERRGGSRDRHGDS
KDRRHRRSRSPHREKKKIKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPE
GLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLCQAPGNPVLA
VQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPG
TSLFCSPNSCVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGL
SKGYAFCEYVDVNISDQAHCLLSQAIAGLNGMQLGDKKLLVQRASVGSKNTTLTGINQTP
VTLQVPGLMNSSVTQMGGIPTEVLCLMNMVAPEELLDDEEYEEIVEDVKDECSKYGQVKS
IEIPRPVDGVEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRREF
W
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtccgattttgacgagtttgagagacagctgacagaaaacaagcaagcggatagagac
aaggagaacaagcaccaccggcgcagtggctcgagaagtcgcagcagagaccaggacagg
aaaaggaggagccgagacagagaaaggagaggaggcagccgagatcgtcatggagacagc
aaggaccgcagacacagacgcagtcgctctccgcaccgtgagaagaaaaagattaaagta
aaaaaatattgggatgttcctcctcctggatttgagcacatcacacccatgcagtacaaa
gccatgcaggctgctggtcagatcccggccactgctctgctacccacaatgacccccgag
ggtctggctgtgaccccaacacctgttcctgttgtgggcagtcagatgactcgacaggcc
cggcggctttatgtcggcaacatcccatttggcatcacagaggagtctatgatggacttc
ttcaatgctcagatgcgtttgggtggcctgtgtcaggccccaggtaacccagtccttgct
gttcagatcaaccaggacaagaattttgcctttttggagtttcgttcggtggatgaaacg
acacaggccatggcatttgatggcataattttccagggacaaagtttaaagattcgtcga
ccacacgactaccagcctctgccaggcatgagtgagaatcccagtgtctatgtcccaggc
acgtctctcttttgctcccccaattcttgcgtcgtctccacggtcgtgcctgattcggcc
cataaactcttcattggcggtctgccaaattacctcaacgatgaccaggtcaaggagtta
ctgacatcatttggcccactgaaggcctttaatttagtgaaagacagcgcaacaggcctc
tctaagggctatgccttctgtgaatacgttgacgtcaatatcagtgaccaggcacactgt
ttactatcacaggccatcgcggggctaaacgggatgcagctgggtgacaagaaactcctg
gtccagagagcaagcgtcggctcaaagaacaccacactgactggtataaaccagacacca
gtcacccttcaagttccaggtctcatgaacagctcggtgactcagatgggtggcattccc
acagaagtattgtgtctgatgaacatggtggctccagaggagctgctggatgatgaagag
tatgaggagatcgtggaagacgtcaaagacgagtgctccaaatacggccaggtcaagagc
atcgagatcccacgtcccgttgatggcgtggaagttcctggcactggaaagatctttgtg
gagttcatgtcagtgtttgactcccagaaggcaatgcaaggcttaacaggaaggaaattc
gccaacagagtggtggtgactaaatactgcgaccctgacgcctaccaccgccgcgagttc
tggtag

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