Carassius auratus (goldfish): 113116406
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Entry
113116406 CDS
T07313
Name
(RefSeq) protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113116406
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113116406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
UPF1_1B_dom
Motif
Other DBs
NCBI-GeneID:
113116406
NCBI-ProteinID:
XP_026140339
Ensembl:
ENSCARG00000034765
UniProt:
A0A6P6R3K2
LinkDB
All DBs
Position
16:complement(18060932..18106784)
Genome browser
AA seq
2626 aa
AA seq
DB search
MRTPKKQRGRSPLSTRAKGARKRGGKLEGHSQTTPPGPSDQKYTPSKEDSSQDKHIKCSN
ILNSEGLKEQIRERTMETSKSEENAVIVSKAKSPRKVNTKSLTDNTDSIKIASNAHENSH
SNSTDICNTNTQNFTSTNSKGSNQHANSIASNTQNTNTTANSLNKNNSLSANHTSTTHSS
RKTATFKARVPKKKYMYEHQAFSTSPIRSTPVAQLTIHSNHRSSPQNSLSQSTTLMVRND
LAKSDISDLNNSGNDRRVMGKIASTETPKEDRSKGDMLKSEVPSEGEKVVQKVEVDGYGE
QAPNSVRSSSTDTASEHSVDLEVPEPSCVQKNSGKHVRTSRRFNLSNNSNLSVLLSPKHT
QIEHGGSVTIAEALAKGLKNQRVLARRRPRTNLNEDEKVIKEYVFICGVVRGSSREQLNV
ELQINGEGTLLSYPFHTLVSRPHQPIDLILDSPPPGNELVEVGTHVCVPYEGDKGEEWYK
EGVVAQVDSHSACPYMVLLQEQEKERCNNEDMQQTSSTKTVWVNRQNLRLLVPPWDGVMR
EKEREEREDREEIEVERELCQLSEGIDLVSAGPPRENCRFPSPDTGVHHFGSTHISSSTS
PAIVMVANNMYSLGTRREADGTQNRERVREREHERKQLQTPEVDMEVLRLNMAPHRDGGG
PIFSGGPKAGVPNQHRQILSKPPGYPSPITVVRGITRTSLGSPQPTSSPTVSGSDGGISH
PMPPSVPPSPGSRGSLTPLEKTPSQTFTPIPGSSASSSASSSRSRTPLSAAQQKYKKGDV
VCTPNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKEMEGAVGERGSGGGGE
SSSGTVTPSDLRGRASSEFDWDETSRDSSETSSRGTDSRPRLGLPSLLPQDFSRFDFDEC
EAATMLVSLGSRSVTPSFSPISNQSPFSPTPSPSASPLFGFHPANFSPITASPVLPPRRH
KHPSGTNSGVPKHGTGGTEREKDRHLSGIVSSLHTNLTFTVPMSPGKRRTDAPPPPAPLL
QEYDKHNQEQSCRDPSIVTNLCIISPQTTIVTHPQRLPSTTASSPPTSPLSLESGSQCTV
SQQPLRDSPVIVRNPEVPLIKFTELPLARVAEVDRTSSTENSQTGVHSETGLQVPVPINA
ASTNGSVLLQNPTSTLVLVSTTSSIPNPTPAGLPTQSSTTLACISVSSPVPGPGLIGAGD
GGGDKSGQVTLQQPVPCHPAPTALLPLILPTETLHPVPCKDIIMGRPGTVWTNVEPRSVP
VFPWHSLVPFLAPTQSDPSAQPGEGQQTVSHPQTSSLKKEAQSGSVLKEIIEGAPNPSSR
PTPSADELLPEREKDAERERPDSETESDVDDPFFPGVLPDPPISASPGKRRSQSLSALPK
DDKTSPGKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEK
QKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEGRGVPGGKDIRERSMSETTEPPSVSM
GMELKGVGPGMVSVSERVGGEGHSQLPRPRAFSQSAMHNLERSERGNPQALAELTQMCGD
GGQVAGRGALSQTQRGVSEDMTSDEERMVICEEEGDDDVIDDSYPGSSIDLKCKERVTDS
DSENGSGDEGERKRVFAPVICSSSYGPGHGRSVSLSSYPTSRHFSDASSKRKRAVEGGDG
ERRECEGAVSQPTGGQSILVSSAGGVSSVLGAVRVASTVVTNVVRPVVSTPVPIASKSPH
DRKLAPPQTQLFIGPGTTGNPATASAGGGGYYSSSSPNPVSASGAQGGLVTNIVLGGTFQ
GPPAVQLVTPPPSASPASAPLTHSNGPIPLPVLQSHILPSASITPLSGQKPITQVQYILP
TLSTNNPKSPSPQQASQPTSIFTLPTALPTHASLANGKQSGYVSSPAVGVVSPGTRVQTQ
SPVLQGKMLVPMATVRSATAPSQQFPLVAPPLPVQNGGQAGSKIIQIAPMPVVQSQLPST
GPVQPGSPFSVTMGTATVVAPGSTPSQTVLLPPPPTRITYVQSTPGVPSPLPLVPMTTGS
SSQTASATPGSAYVPSPLATFAAIAHPGQTLVQPLIAGQPSLLAPAQSPSAPHAPAITAI
YTPANVTLPTGVVSRATVSPSVVYTVSSSSSLSAHILPKHTTTTSMTSVTSDRQRNISTH
YEQQLHQERTLDRQHMDSQVYTQSSERQAEKVSLLQQEKQFQVPSKSSSSSVAPPLGTSV
PLQPGSLAQISHSGSAPGTPKLMTPRPPQKVKATVANIPVGSYDGGGRGKEREKERDREK
EREREKDKESGSRFSFEVDKAAETSSPATFPPEEGSAEAPTHSLAESATPSCRGKEANAK
ETEWKESHPSSPLPSPSGSDPALPQSHGDKDAPPKRIKARPPPLKRPFDSVDKVLSEVYF
EERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSSTEDPISPKRKSR
RRSSCSSEPNTPKSAAKCEGDIFTFDRPDGEDVLGELEFEKVPYSSLRRTLDQRRALVMQ
LFQEHGFFPSAQATAAFQARYADIFPTKVCLQLKIREVRQKIMQTAAPSESAGILDISSL
PGPSGAATASDAAMGAEPEEKEDEREGEQNSSGEPRSAVDSQDTSR
NT seq
7881 nt
NT seq
+upstream
nt +downstream
nt
atgaggacaccaaagaaacagagaggacgctctcctttatcaacaagagcaaaaggagca
agaaaacgagggggcaaacttgaaggacattcacagacaacaccgcctggaccttcagac
cagaaatacactccatccaaagaagatagctctcaggacaagcatatcaagtgtagcaac
attcttaacagtgaagggttaaaagagcaaattagagaaagaacaatggaaacatcaaaa
tctgaagagaatgcagtaatagtgagtaaggcaaaaagccccaggaaggttaacactaag
agtttaacagataatacggactcaatcaagatagccagcaacgcacatgaaaattcacat
agtaatagcacagacatctgtaacacaaacacacaaaactttactagcacaaacagtaaa
ggtagcaaccaacatgcaaacagcattgctagcaatacacaaaacacaaatactacagcc
aacagtttaaataaaaataactctttgagtgccaaccacacttctaccacacactccagt
cgaaaaacagccactttcaaagccagggtgcccaagaagaaatacatgtatgaacatcaa
gctttcagtacctctcccatcaggtctacccctgtagcccaactcactattcatagcaat
catcgaagttctccacagaactctctttctcaaagcactactcttatggtcagaaatgat
ttagctaaatcagatatttctgatctgaacaatagtgggaatgataggagagtaatggga
aaaatagcaagcacagaaactccaaaagaagatagatctaagggtgatatgttgaaaagt
gaggtaccttccgaaggagaaaaggtggtccaaaaggtggaagtagatggatatggggag
caagccccaaattctgtccgctcatcttccacagacacagccagtgaacactctgtggac
ctggaggtccctgagccctcttgtgtgcagaaaaattcagggaaacatgtaagaacgtca
agaagattcaacctctccaacaactcaaacctgtctgttctcttgtccccaaaacacaca
caaattgaacatggagggtctgtaacaatagcagaagcactagctaaaggactgaaaaac
caaagggtgctagcacgtagacgaccaagaactaatttaaatgaagatgagaaggtgatc
aaagaatatgtatttatctgtggtgtggtacgtgggtccagtagagagcagctgaatgta
gagttgcagattaatggggaggggacactgctatcatatccatttcatacattagtaagt
cgcccacaccaacccatcgacctcattttagactccccacccccaggaaatgaacttgtg
gaggttgggacgcatgtttgtgtgccttacgaaggagataaaggtgaagagtggtacaaa
gaaggtgtggttgctcaggtagactctcattcagcttgcccctacatggtgcttttgcag
gagcaggagaaagagaggtgcaacaatgaggatatgcaacagacatcaagtacaaagact
gtatgggttaaccgtcagaacttgcgcctccttgttccaccatgggatggggttatgaga
gagaaagaacgggaggagagagaagacagagaggagatagaagtggagagagagctatgt
cagttaagtgagggaatagatctggtaagtgcaggccctcccagggagaactgcagattc
ccttctccagacacaggggttcatcactttggaagcacacatatttcatcttccacttca
ccagcaattgttatggtagcaaacaatatgtatagtttaggaactaggagagaggctgat
ggaactcagaatagggaaagagttagagaaagagaacacgagcgaaagcaactgcagact
ccagaggtggacatggaggttttgcggcttaacatggcaccacacagagatggtggagga
cccatattctcagggggaccaaaagcaggtgtgcctaatcagcacagacaaattctttcc
aaacctcctggttatccaagtcccattacagtggtgcgaggcatcaccaggacctcttta
ggaagtccacagcccacctcttcacctacagtttcagggtctgacggaggtatctctcac
cctatgccaccctctgtgcctccttcccccggctccagaggttctttgacacctctggaa
aagactccttcacagaccttcaccccaattccagggagttctgcctcttcttctgcttct
tcctcaagatcaaggacaccattgtcagctgcccaacagaaatacaagaaaggcgatgtg
gtttgtacacccaatgggatacgtaagaagttcaatgggaagcaatggcgccgcttgtgc
tcacgagaaggttgtatgaaagagtcccagcgtcgtggctattgttctcgtcacctctcc
atgcgtaccaaagaaatggagggagcggtgggagagagagggagcggaggaggtggagag
agtagctcggggaccgtgaccccttcagatctgcggggtcgtgctagcagtgaatttgac
tgggatgagacttctcgcgacagtagtgagacaagcagccgaggtactgactctcgtcca
cgtcttggcttgccatcactgcttcctcaagacttctctcgttttgactttgacgaatgt
gaggctgcaacaatgctggtatccctgggctcaaggtctgtaacgccctcattctcaccg
atttcaaatcagtccccattctcacctacaccttccccatcagcttcgccactttttggc
tttcaccctgcaaatttcagtcctattactgcctctccggtcttgcctcctcgccgccac
aaacaccccagtggtaccaacagtggtgtcccaaaacatggaacaggaggcacagagagg
gagaaagacagacacttgtctggtattgtgtcatccttgcacaccaatctaaccttcact
gtacctatgagcccaggcaaacgcaggacggatgcgccacctcccccggctccactgttg
caggaatatgacaaacacaatcaggaacaaagctgtcgtgacccttctattgtaacaaat
ctctgcattatctctcctcagaccactattgtcacgcacccccaaagactgccttcaacc
actgcctcttctccacccacttctcccctaagcttagaatcaggttcacaatgtacagtc
tcccagcagcctttgagagactctccagtaatagtgagaaatcctgaggttcctttaata
aagtttacagaactaccactggccagagttgcagaggtggacaggaccagttccacagaa
aacagccaaactggtgtgcattcagagacagggctacaggttcctgttccaattaacgct
gcttccactaatggatctgtcttactgcagaatcccacctcaactcttgttctagtatct
actacctcttccattccaaacccaacccctgcaggtctacctacgcaatccagcaccaca
ttagcctgcatatcagtgtctagccctgtcccagggccaggtctcattggtgcgggtgat
ggagggggagataagagtggccaagtgacactgcagcagcctgtcccttgtcaccctgct
cctactgccctgctgccgctcatacttcccacagagaccttgcatcctgtgccatgcaaa
gacatcatcatggggcgacctggaactgtgtggactaatgttgagcccagatcggttcca
gtgtttccttggcattcattggtccctttcctggcacccacccaatcagatccatcggct
cagcctggtgagggccaacaaactgtcagtcatccgcagacatcttctctgaagaaagag
gctcagagcgggtcagtgctgaaggagattatagagggagcacctaacccttcctcacgc
cccactccctccgccgatgaactgctcccggagagagagaaagatgcggagcgagagaga
cctgacagtgaaacagaaagtgacgttgatgatccgtttttcccaggtgttcttcctgat
ccgccaatttctgcgtctcctggaaaacgtagatctcagtccctcagtgcactgcccaaa
gatgacaaaaccagtcctggaaagagggagaaagaccacatccggaggcccatgaatgca
tttatgatcttcagcaagcggcatcgtgcactggttcatcagagacacccaaaccaggac
aaccgcactgtcagcaagatacttggagagtggtggtatgctttgggacccaaagagaag
cagaaataccacgacctcgcatttcaggtgaaggaggcacactttaaggcacatcctgac
tggaaatggtgtaataaggacagaaagaaatccagcagcgagggacgtggtgttccaggg
ggcaaagacatccgcgagaggagcatgtcagaaaccacagaacctccatctgtgtcaatg
ggaatggagctcaaaggtgtggggcctgggatggtgagcgtgtcagagcgagttggaggt
gagggacatagtcaattgcctcgtcctcgtgccttctctcagagcgccatgcacaatctg
gagaggagcgagagaggcaatccacaggcactcgctgagctcacacagatgtgtggtgat
ggtggtcaggttgctgggcggggtgctctctctcagacacagaggggggtaagtgaggac
atgacaagtgacgaagagcgtatggtcatctgtgaagaagagggggatgatgatgtcatt
gatgactcatatccaggcagctccattgacctaaagtgtaaggagagggtgacagacagt
gatagtgaaaatggatctggagatgaaggagaacgcaagagagtttttgctcctgtgatt
tgctcctcatcttatggccctggtcacggtcggagcgtgtctctctcctcctaccccacc
tctagacattttagcgatgcttcatcaaaaagaaagcgagcagtggagggaggtgatgga
gaaagaagggaatgtgaaggagcagtgtcccagcccactgggggtcagtccatcctggtc
agttcagccgggggagtgtcgtcagtgctaggagcggtgagagtggcgtccactgttgtc
accaatgtggtgcgacctgtggtcagcacaccggtgccgatcgccagcaagtccccacat
gaccggaaactcgctccaccacaaacgcagcttttcattggacctggaaccacaggaaac
ccagcaacagcttcagctggagggggtgggtactattcctcatcatcgcccaatcctgtt
agtgcatcaggagctcaagggggactagtgaccaatatagttttgggaggcacattccaa
ggcccacccgccgtacagcttgtcacaccacctccttcagcctccccagcatcagcccca
cttactcatagtaacggtccaattcctttgcccgttctgcagtcgcacattctcccctct
gcctcaataacgcctttatcaggtcaaaaacccataacacaggtccagtacattctccct
accctctctaccaacaatcccaagagcccctcccctcagcaggccagtcagccaaccagt
atcttcaccctacctacagctctgcccactcacgcctcgttggccaacgggaagcagtcg
ggatacgtctccagtcctgctgtgggtgtagttagcccaggaaccagagtgcaaacacag
tcaccagtcttgcagggcaagatgctggttcccatggcaacagtgcgatctgctactgcc
ccctctcagcagtttcccttggtagcccctcctcttcctgttcagaatggaggacaagca
ggaagcaagattattcagattgctccgatgcctgtcgtccagtcgcagcttccctcgacg
ggaccagtgcaacctgggagcccgttttctgttactatgggaacagctactgtggtcgcc
ccaggctctaccccgtctcagaccgtgctgctaccgcccccacctacaagaatcacttat
gtacagtccactcctggggttccttctcctttgccattagttcccatgacaacaggctcc
tcctctcagacagcttcagcaacacctggatctgcttatgttccatcacccttggccacc
tttgcagcgatcgctcatccaggacagactttggtgcagccactgattgcaggtcagcca
tcgctgttggcccctgcccagtctcccagcgcccctcacgctcctgccatcaccgccatc
tacacccctgcaaatgtgactttgccaactggtgtggtatctagggcaacggtgtcaccc
agtgtggtgtacacagtgtccagttcctctagcctctctgcacacatccttcctaaacac
accacaacaacctctatgacctctgtgacctcggacaggcagaggaacatatccacacac
tatgagcaacagttgcaccaggaacgaacactggacagacagcacatggacagtcaggtc
tacacacagtcctctgagagacaggccgagaaggtttcgctattacagcaagaaaaacag
ttccaggtcccaagtaaaagcagcagcagttcagttgcgcccccactgggcacctcagtg
ccactgcagcctggaagccttgctcaaatctcccattctggaagtgctccagggacaccc
aaactgatgacaccaaggcctcctcagaaagtgaaagccacagtggccaacatcccagtg
ggcagttatgatggaggagggagaggcaaagaacgagaaaaggagagggacagagagaaa
gagagagagcgagagaaggacaaagagagcggcagtcggttctcatttgaggtagacaag
gcagctgagacgagctcgcctgcaaccttcccaccagaggaggggtctgcagaagccccc
acccactctttagcagagagtgctacgcctagttgccggggcaaagaagcaaatgctaag
gagactgaatggaaggaatcccacccttcttctccattaccttcaccctctggatcagat
cctgctctgcctcagtctcatggtgataaagatgcaccacctaaaagaatcaaggcccgg
cccccaccactcaaacgaccatttgattctgttgacaaggtcctgtcagaagtgtacttt
gaggagcgctttgcagagctgccagaattccgtccagaagaggttctgccctctccaacc
ctgcagagtctggccacctccccacgagccatactgggcagctaccgcaggaagagaaaa
aactccaccgacctggactcatccacagaagatcccatctcaccaaaaaggaaaagccgc
cgcagatctagctgcagttcagagccaaacacacctaaaagtgctgcaaagtgtgagggg
gacattttcacctttgataggccagatggagaggatgttctgggggagctggagtttgaa
aaggtgccctactcctctctcaggagaactcttgatcagaggagagctcttgtcatgcag
ctattccaggagcatggcttcttcccctcagctcaagctactgctgcattccaggcgcga
tacgctgatatcttccccactaaggtgtgtttacagctcaagatccgtgaggtccggcaa
aagatcatgcaaacggcagctccatctgaatcggctggcattttggatatttcctcatta
ccaggaccttctggggcggcgactgccagtgacgcagctatgggggcagagcctgaggag
aaagaggacgagcgggagggtgagcaaaacagctcgggggagcccagaagcgctgtcgat
tcacaggacaccagcagatga
DBGET
integrated database retrieval system
