Carassius auratus (goldfish): 113116522
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Entry
113116522 CDS
T07313
Name
(RefSeq) LIM domain-containing protein 1-like
KO
K16682
LIM domain-containing protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113116522
03036 Chromosome and associated proteins [BR:
caua03036
]
113116522
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
113116522
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
113116522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
113116522
NCBI-ProteinID:
XP_026140516
Ensembl:
ENSCARG00000017030
UniProt:
A0A6P6R5N7
LinkDB
All DBs
Position
16:complement(21487857..21524125)
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AA seq
568 aa
AA seq
DB search
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVKRDAGNNPDFEETRKVFASKMTKIHMQKQ
QEEMARNSLAARINGSHSKVSDNTFYTKDRPPINSYRQGGEAAAKPPIMSGPMVGTASVS
PYISYEGQKHNFASLPDGSSNRVYDINETGNAVNPIPVPARSAPSTSPPGTWASRSVYPS
QTPSSPFSNSSSSSSSPGAGQNYSPVSQGFPQTGKSPSQSPTGTYRDAYHQPQQVSPVQH
QLSSAQRPASGPTYQNGGAHNIGTPSPTQVTQFPLSHGGKQGEPSQPKSPAPGNLTVPAS
TPVESPHDESSSPSRALKLPCQTLHVQTDQGPSAAEIKLEALTERLEKEMDAQPKAEYFG
SCVKCSKAVYGASQACQAMGSLYHDSCFTCSACSRKLRGKAFYYVCGKVFCEEDFLYSGF
QQSADKCNVCGHLIMDMILQALGKSYHPGCFRCAICNESLDGVPFTVDTDNKIYCVKDYH
RVLAPKCAACNQAILPSEGSDETIRVVSMDKDYHVQCYHCEDCHMELNDEEGHRCYPLDG
HLLCHGCHLKHMDPAAPLSTANSYHSQF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgacgatttgggacttgaggcgagtaaattcatcgaggacttgaacatg
tatgaagcatcgaaggacggcttatttcgcgtgaagagagatgcgggaaacaacccggat
tttgaagaaaccagaaaagtcttcgcttcaaagatgaccaaaatacacatgcagaagcag
caagaggagatggcaagaaacagtctggcggcaagaatcaatggaagtcactcgaaagtg
tcagataacacattttacaccaaagacagaccacccatcaatagttatagacagggtggt
gaagcagcagccaaaccacccatcatgtctggaccaatggttggcactgccagtgtgagt
ccatacatatcttatgaaggacaaaagcataattttgccagcttacctgatggatccagc
aacagggtatatgacattaatgagactgggaatgctgttaacccaataccagttccagcc
cgatcggcaccctctaccagcccccctggcacatgggcatcaagaagtgtttacccgtct
cagacaccatcatctcctttctccaacagttcctcctcttccagctcacctggagcaggt
cagaattattctccagtgtctcagggattccctcaaacagggaagtctccctctcagtcg
cccacaggaacatacagggatgcatatcaccagccgcaacaggttagccctgtacagcac
caactaagctctgcccagaggcctgccagtggaccgacatatcaaaatgggggagctcat
aatattggcaccccctcccctacccaggtgacacaatttccattgtctcatggagggaag
caaggtgagccatcccaacccaagagccctgcacccggtaacctgacagtgcccgcttct
acccctgttgagtcgccccatgatgagtcttccagcccttctcgggcgctcaagctgcca
tgccagaccctccatgtacagacggatcaggggccatctgcggctgaaataaaattagaa
gctctaactgaacgcctggaaaaggagatggacgcccagccaaaggctgagtactttggc
agctgtgtgaagtgcagcaaggcagtgtatggagcgagtcaggcgtgtcaggccatgggc
agcctgtaccacgacagctgcttcacctgcagcgcttgcagtcgaaagctgagagggaaa
gccttttactacgtctgtgggaaagtcttttgtgaagaggacttcctgtactctgggttc
cagcagtctgccgataaatgcaatgtatgtggacatttaatcatggacatgatcctgcag
gcgctgggaaagtcttaccacccaggctgcttccgctgcgccatctgtaacgagagtctg
gatggagtgcctttcactgttgacaccgacaacaagatctactgcgtgaaggactatcac
agagttcttgctcctaaatgtgccgcatgtaatcaggcgatcctgccgtctgaggggtca
gatgaaaccattcgagtggtttccatggacaaggactaccacgtgcaatgttatcactgt
gaggactgtcatatggagctgaatgacgaggagggtcaccgctgctatcctctggacgga
cacctgctgtgtcacgggtgtcacctcaaacacatggaccctgccgccccgctgtctaca
gctaacagctaccacagtcagttttaa
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