Carassius auratus (goldfish): 113116583
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Entry
113116583 CDS
T07313
Name
(RefSeq) iroquois-class homeodomain protein irx-2-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113116583
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113116583
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
113116583
NCBI-ProteinID:
XP_026140607
Ensembl:
ENSCARG00000051187
UniProt:
A0A6P6R521
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Position
16:23682736..23687465
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AA seq
432 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPLAAPRSEELARSSSGSAFSPYPGSAAFTASANAFSSPLP
YSTDPATGFPSYMGSPYDAHTTGMAGAISYHPYGSPGYPYQLNDPAYRKNATRDATATLK
AWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRTKSEDED
EDDGDGERKDERTDKNTDNSEASAEDEGIGLHLTDHSCSVESDGEKVTCRTGDRVCDSGP
DIKDKCDSGDLDTGLEDRQRAPTPEPLTSSPLTAVEAPLLTHHHRENSTNKTCLDGQNQS
VKPKLWSLAEIATSDPKQQQNCPPGVGLLTSPASSASPAGAVYPATSILGRPLYYTSPFY
SRPNYTNYGSFSPLQGQGILRYNSSAEGLLRAEPLLKTSPNQTEQHFRASGADSKKDPSE
VFTVRSQSYLSS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctccctggcgctctactcctgt
ccgctggccgccccgaggagcgaggagctggcccggtcctcgtccggttcagcgttcagc
ccgtaccccggatctgcggcgttcacagcctcggccaacgctttctccagccctctgccc
tactccacagatccagccacgggattcccgtcctacatgggctctccgtatgacgcgcac
accacgggaatggcaggagccatcagttatcacccgtacgggagtcccggttacccgtac
cagctcaacgaccccgcgtaccggaaaaacgccacgcgggacgcgacggcgacgctaaaa
gcgtggctccaggagcacaggaaaaacccctatcccactaaaggagagaagatcatgctg
gccatcatcaccaagatgaccctcacgcaggtgtccacctggttcgccaacgccagaaga
agactcaagaaggagaacaagatgacatgggctccacggactaaaagtgaggatgaggac
gaggacgacggcgacggggagagaaaagacgagcgcacggataaaaacacggacaacagt
gaagcgtctgctgaggacgaaggcatcggtttgcacctgacagatcactcgtgctcggta
gaatctgacggagagaaggtcacgtgcagaaccggagaccgggtctgtgattctggaccc
gatatcaaggacaaatgtgactctggtgatctggacacgggcctcgaggacaggcagaga
gccccgacacccgagccgctgacctcctcccctctgaccgcggtggaggcccctctcttg
acccatcatcaccgagagaacagcaccaacaaaacatgtctggacggtcaaaaccaaagc
gtcaagcctaagctgtggtcattagccgagatcgccacttcagacccaaagcagcagcag
aactgtcccccgggcgttggccttctgacctccccggcgtccagcgcgtctccggcgggc
gcagtgtaccccgccacctctatattaggaagaccgctttattacacctcgccgttttat
agtaggcctaattacacaaactatggcagcttcagcccgctgcagggccaggggatactg
cgatataactcatctgctgagggactcctccgagccgagcctctgctgaagaccagtccg
aaccagaccgagcagcacttccgggcctccggcgcagactccaaaaaagaccccagcgag
gtgttcacagtaagatcccagtcatacctgtcgagttaa
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