KEGG   Carassius auratus (goldfish): 113116604
Entry
113116604         CDS       T07313                                 
Name
(RefSeq) integrin alpha-8-like
  KO
K06584  integrin alpha 8
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04510  Focal adhesion
caua04512  ECM-receptor interaction
caua04514  Cell adhesion molecule (CAM) interaction
caua04518  Integrin signaling
caua04810  Regulation of actin cytoskeleton
caua04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113116604
   04514 Cell adhesion molecule (CAM) interaction
    113116604
   04518 Integrin signaling
    113116604
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113116604
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113116604
   04810 Regulation of actin cytoskeleton
    113116604
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:caua04515]
    113116604
Cell adhesion molecules [BR:caua04515]
 Integrins
  Integrin alpha subunits
   113116604
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 113116604
NCBI-ProteinID: XP_026140622
Ensembl: ENSCARG00000053400
UniProt: A0A6P6R535
LinkDB
Position
16:25674028..25736003
AA seq 1048 aa
MHPCSFRVCFRVFLLIFAILREAAPFNLDLEKPAVYNGPEGSYFGYSLDFYHPTQDRNVM
SVLVGAPKANTSQPGIVEGGAVYYCPWPASDPDSCRQIPFDKANNRMIKVNGTREPLEFK
SHQWFGASVRTHKDKVVACAPLYHWRSVKVSSEMDPVGTCYVAVQNFSAYAEYSPCRTNN
PDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVITAGVAEILNGYSLKNILRKVQG
EKQTVAASDAYDDSYLGYSVAVGEFTGDSEQELVAGVPRGAHNFGYVAVINATNLTFIQN
FTGEQMASYFGYTVAVTDLNGDGLDDVLVGAPLYMDREFESKPREVGRVYLYLQEDVLLF
SPPITLTGTHLFGRYGSAIAPLGDINQDGYLDMAIGAPFAGEDRGGRVFIYNGQKSGLML
QASQVLKGDWASSAVPAGFGFTLRGDSDLDNNQYPDLLVGAFGVSKVVAYRARPVVTVDA
QLILTPRILNPEDKSCRMPNSDDMVTCLSVNVCAKISGIGIPDYVALRMDLQLDWLKQRG
AVKRILFMDSHQHQRTQQLVLGQGDRQHCHNYSVYLRDEGEFRDKLSPISVTLNYSLDQN
SPPPGLQLRPILDHYSKTFHHEQANILLDCGEDNMCIPDLKLSAKMDRTELLIGDDNFLM
LTINAANEGEGAYEAELHVTLPPEADYIGVERRREDLQRLNCEHRTENDTRVVVCDLGNP
MVADTNLSVGLRFSVQRLEDAPPTIGFELQIHSSNKDNSRSVPVNLTLSIAARAQVEIRG
VSHPAQVVLPFPRWEPKEKPVREDDVGPQVQHIYELHNKGPSSISRTVLEVGWPSRFHEE
HLLYLLQIVTDGPVHCSVNGSLNPLNLETSSLQDTPELLGFLKNSSTPNRHRRSVSTAQS
YNSKILNCSNINCLMVECVVDRLDRGQSAVIKFRSRLWAHTFLQRRNDHYTLNSTVSFQV
MAMPYRIKADSLPHQSKSIGTFVVWAIPDVSFAIPLWVIILAILLGLLVLAMLSLAMWKC
GFFDRARPPKDDDVSDREQLTSEKSTDA
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgcacccttgttctttccgcgtgtgttttcgtgtgtttttgctcatatttgcaattcta
cgcgaagctgcacctttcaacctggatttggaaaagccagcagtttacaatggaccagag
ggaagttattttggatactcactggacttttaccacccaacacaggatagaaatgtcatg
tcggttctagttggggctcctaaagcgaacacctctcagccagggattgtggagggagga
gcggtgtactactgcccctggccggcatcagacccagactcctgccgccagatccccttt
gataaagcaaataaccgaatgattaaagtgaacgggacaagggagcctctagaatttaaa
tcccatcagtggtttggagcctcagtcaggacccacaaagacaaagtggtggcttgtgcg
cccctctatcactggaggtcagtgaaggtcagcagtgagatggatccagtgggaacttgt
tatgtggctgtgcagaacttcagtgcctatgctgagtattctccatgtcgaaccaataac
ccggaccccgagggccagggcttctgccaggcgggcttcagcgttgattttactaaggaa
gggactctggttgtgggagggccagggagtttctactggcaaggtcaagtgatcactgca
ggtgttgcagaaatattaaacggctattccctgaaaaatattctgcgcaaagttcaggga
gagaagcagacggtggctgcatcagacgcatatgatgacagttacctaggctactctgta
gcagtcggagagttcacaggtgattcggaacaagaactggtagcaggggtacctcgaggg
gctcacaactttggttatgtggctgtgatcaatgcaacaaacctgacttttattcagaat
tttactggggagcagatggcctcttattttggatacaccgtcgcagtgactgatctaaat
ggagatgggctagatgacgtactagttggagctccactctacatggaccgtgagtttgag
agtaaacctcgtgaggtgggccgtgtgtacttgtatttgcaagaggacgtgcttctcttc
tctcctccaatcacactcactggaacgcacctgttcggccggtatggaagtgccatcgcc
cctctcggagatatcaaccaggatggctaccttgacatggcaataggagctccgttcgca
ggagaggatcgtggtggcagggtcttcatttataacgggcaaaaatctgggctgatgtta
caggcatctcaagtgctgaaaggcgactgggcctcatccgctgtcccagcaggcttcgga
ttcaccctgcgtggagattcggacctcgataacaaccagtaccctgatttgctggtcggt
gcatttggagtgagtaaagttgtggcctacagggcaaggccagtggtcacggtggacgct
cagctaattttgacacccagaattctcaaccctgaggacaagtcctgccgcatgcccaat
tctgatgatatggtaacctgtctgtcagtaaatgtgtgcgcaaagatctctgggattggt
attcctgattatgtagctctaagaatggacctgcagctggactggctgaagcagcgtgga
gcagttaagaggatcttgttcatggactctcaccagcaccagagaacccagcagttggtt
ctgggtcaaggggaccgccaacattgccacaactactctgtttacctgcgggatgaggga
gagttcagagataaactgagtcctatcagcgtgacgctgaactacagtctggaccagaac
tctcctccacctggcctacagctgcggcccattttggaccactacagcaagaccttccac
catgagcaggccaacatcctgttggactgtggagaagacaacatgtgcatcccagatctc
aaactgtctgctaaaatggaccggactgaacttttaatcggggatgacaactttcttatg
ttgaccattaatgcagccaatgagggcgagggggcgtacgaggcagagcttcatgtgacc
ctcccaccagaggcagactatattggtgtggagcgtagacgtgaggatcttcagcgactg
aactgtgagcaccggacagagaatgataccagagttgtggtttgtgacctgggaaaccca
atggtggctgacacaaacttatcggttggtttacggttttctgtgcagcggctggaagat
gcccctcctaccattggctttgagcttcagatacacagctctaataaagacaactcaaga
agcgttccagtgaatttgactctgagcattgcagcgagagcacaggtggagatccgaggt
gtgtctcacccagctcaggttgttttaccattccctcgatgggaacccaaagagaaacct
gttcgagaggacgacgtcggccctcaggttcaacacatatatgagttacataataagggt
ccgagttcaataagcaggactgtgttggaggtgggctggcccagtcgtttccatgaggaa
cacctcctttatctccttcagatcgtcactgacggtccagtgcactgcagtgtcaacggc
tccctaaacccactgaatttagagacctccagtcttcaggacactccagaattactgggc
tttctgaagaacagcagcactccgaatcgccatagacgatctgtttctacagcccagagt
tacaacagcaagatactgaactgctcaaatatcaactgcctgatggtggagtgtgttgtg
gaccgcttggatcgaggccaaagcgcagtgatcaagttcagatctcgactctgggctcac
accttcttacagagacggaatgaccactacacgctgaactccacagtgtcctttcaagtg
atggccatgccttatcggatcaaagctgattcactcccacaccagagcaaatcaattggc
acatttgtggtgtgggccattcctgacgtttcctttgccattcccctgtgggtaataatt
ctggccatactgctgggattgctggtgctggctatgcttagcctagcaatgtggaagtgt
ggcttctttgatcgagcgcggccacccaaagatgatgacgtgtcggaccgtgagcagctg
acctcagaaaaatccacagacgcgtga

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