Carassius auratus (goldfish): 113116750
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Entry
113116750 CDS
T07313
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113116750
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
caua04990
]
113116750
Membrane trafficking [BR:
caua04131
]
Protein recycling
Others
Others
113116750
Domain-containing proteins not elsewhere classified [BR:
caua04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
113116750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
SNX17_FERM_C
USP7_C2
PDZ_2
DarA_N
SNX17-31_F2_FERM
Sina_TRAF
RA_3
Motif
Other DBs
NCBI-GeneID:
113116750
NCBI-ProteinID:
XP_026140870
Ensembl:
ENSCARG00000058417
UniProt:
A0A6P6R702
LinkDB
All DBs
Position
16:complement(28030924..28043002)
Genome browser
AA seq
569 aa
AA seq
DB search
MADVVEGDGSRSSGPSMLPSAVRNGSGMCSGTCAGGLVATTVTSGPRWVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHK
QVVDLIRAGEKELVLAVLSVPQPETDSLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFAFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDVVQEFLSESDENYNGVSDVELRIAMPDKTTVTVRVRKNC
TTDQVYQAVVTKIGMDSITASYFALFEVINHSFARKLAPNEFPHKLYVQNYTSAIPGTCL
TLRKWLFTTEEEILLSDNELAISYCFHQALDDVKRGFIKVGEKSYQLQKLTEQRKMTMYL
GILRTCEGYNEITFPHCSCDSRRKGHVVTAISIHHFKLHACTEDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWGKEVEEEATDKD
NKNCSKDEYLPTVETQKGWRHMNEEIISS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttgtcgaaggagacggcagtcgctcctctggtccttccatgcttccctcg
gcggttcgcaacggctctggcatgtgctcgggaacgtgcgccgggggcctggtcgcgacc
acggtcacctccgggcctcggtgggtccgcatcgtcaagtcggactcgggctatggcttc
aatgtccgcgggcaagtaagcgaaggagggcagctgaggagcatcaacggcgaactttac
gccccgctgcagcacgtcagcgccgtgttaccgggcggcgcggcagaccgagccggaatc
tcaaagggcgaccgtattcttgaagtaaatggggtgaatgtggaaggggccactcataag
caggtggtagatctcatccgagcaggagagaaagagttagtcttggctgtcctgtcggtt
cctcagccagagacggacagccttgatcccggggacgatggctcatcgcaatcctgctat
gattacagtgacaagcaggctgtgcccatctccgtgcccacctacaaacatgtggaacag
aatggagagaagtttgtggtctacaacgtgtacatggcaggcaggcagttgtgctcaaag
cgttatcgggagtttgccatcttgcatcagaatctgaagagggaatttgccaactttgca
tttcccaagctgccagggaaatggcctttctctctgtctgagcaacagctcgacgctcgc
agacgagggctggaggaatacttggagaaagtgtgttctgttcgggtgattggagagagc
gacgtcgtgcaggagtttttgtcggagtctgatgagaattataatggtgtttctgatgtg
gagctaaggatagccatgccagacaaaactacagtaactgtccgagtgcgaaagaattgc
acaacagaccaggtctaccaggctgtggtaacaaaaatagggatggacagcattactgca
agttattttgccctgtttgaagtcattaaccactcctttgctcgcaagctggcccctaat
gagtttcctcataagctgtatgtgcagaactatacgtctgccatcccaggcacctgcctc
acgcttcgcaagtggcttttcaccacagaagaagagattctgctcagtgataatgagctg
gccatcagctattgctttcatcaggctctggatgatgtgaaaaggggattcatcaaagtg
ggagagaaatcctaccagctccaaaagctcactgaacagaggaaaatgaccatgtattta
ggtattctgaggacttgtgagggctacaatgagatcactttcccgcactgctcctgtgac
tcacgcaggaaaggtcacgtggtcactgcgataagcatccaccactttaaactccatgcg
tgcacagaggatggcactctagagaatcaggtgatagcttttgaatggtccgagatgcag
agatgggacacggatgaagagggaatggctttctgtttcgagtatgcgcgaggggagaag
aaacctcgctgggtcaaaatctttactccatatttcaactacatgcacgagtgcttcgag
agagtcttctgtgagctaaaatggggaaaggaggttgaagaggaggccacagacaaggac
aataagaactgcagtaaagatgaatatcttccaactgttgagacacagaagggatggagg
cacatgaatgaagagatcatctcctcttga
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