Carassius auratus (goldfish): 113117261
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Entry
113117261 CDS
T07313
Name
(RefSeq) synaptosomal-associated protein 23-like isoform X1
KO
K08508
synaptosomal-associated protein 23
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
113117261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113117261
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113117261
Membrane trafficking [BR:
caua04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
113117261
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113117261
Exosomal proteins of other body fluids (saliva and urine)
113117261
Exosomal proteins of colorectal cancer cells
113117261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
OEP
Use1
V-SNARE_C
DUF4192
GlutR_dimer
COG6_N
Motif
Other DBs
NCBI-GeneID:
113117261
NCBI-ProteinID:
XP_026141590
Ensembl:
ENSCARG00000031628
UniProt:
A0A6P6R8R2
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All DBs
Position
17:11329659..11337731
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AA seq
237 aa
AA seq
DB search
MSKQPQSVELKATGGAANLDTSKMADMTVEDITMRANQVTDESLESTRRMLQLAEESRET
GVKTMTMLDEQGEQLRRVDQGMDQINQDMRQAEKNLTDLSKCCGLCVCPCDRVTSIEHDG
RYKKTWGTGSDNPGMEGKEGGVVSSQPTAVRNGQAVSSGSGGASGPYIKRVTNDAREDEM
EENLDQVGGIIGNLKNLALDMGNEIEKQNKTIDRITDKADMNKARIDEANQRANKLL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaaccccagagcgttgagcttaaggccacaggaggggcggcgaacttggac
accagcaagatggcagacatgacagtggaggacatcacaatgagagccaaccaagttaca
gatgagtcacttgaaagcactcggcggatgctacagttggcagaggagagccgggagacg
ggtgtcaaaacaatgaccatgctggatgagcagggagagcaactgaggcgagtcgatcaa
ggaatggaccagatcaatcaggacatgaggcaggccgagaagaacctgactgatctgtcc
aaatgctgtggcttgtgtgtgtgcccatgtgacagagtgacgtctattgagcatgatggg
agatataagaagacttggggcacaggtagtgataaccccggcatggagggaaaagagggc
ggagttgtatccagccaaccaactgctgttcgcaatggacaggctgtttcgagtgggtca
gggggcgcatctggcccctacattaagagagtcacaaatgatgcgcgagaagatgagatg
gaggagaatctggaccaggtgggtggcatcatcgggaatctcaagaatttggccttggat
atgggcaatgagattgaaaaacagaacaaaaccattgaccgcatcactgataaggctgat
atgaataaagctcgtattgatgaagccaaccagcgagccaacaaacttctgtag
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