Carassius auratus (goldfish): 113117310
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Entry
113117310 CDS
T07313
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04020
Calcium signaling pathway
caua04080
Neuroactive ligand-receptor interaction
caua04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113117310
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113117310
04082 Neuroactive ligand signaling
113117310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113117310
Ion channels [BR:
caua04040
]
Ligand-gated channels
Glutamate (ionotropic)
113117310
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Trp_repressor
Motif
Other DBs
NCBI-GeneID:
113117310
NCBI-ProteinID:
XP_026141699
Ensembl:
ENSCARG00000054522
UniProt:
A0A6P6R790
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All DBs
Position
2:15302840..15337405
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AA seq
1127 aa
AA seq
DB search
MNLVLSRFLAYLHVGLQVALQMFIYPCHLHPQPCHILARIGHTVRLGALLPTRQQSRIQG
ALNRALVHLRQSGNNFLPYNLSLEVLSREPLNGDPESMFRCVCQDIVVQGVSAVLAFPQS
HEELIQVEFMSSFLEIPFISIIEEGEPLKTQNRFHLQMMTRTPPSGLSELLLAVLLKGGW
QGGAAILCPGGGKTGMLEELKQRGHLGLNGAHWHLWETLNLSRLEENLSEDKVMKLLSQL
LSRTPSAPASSVVLFGSDPECTARVLHSAHQLSITLPHMHWIMGYPLSLDSLHSIGSPPG
LLAYGEVNRKPLNFYIRDTLQLIGRAVYAATMVRPDLALIQNMVNCFDKPNKHELPSSGQ
YLARFLSNTSFTGLTGPVRVQRSLSRVLTSQRFHIWSLQRDPLGQPSWVTVASWQSSHLE
MEEQGLWPGMNQHHWEDGPEIRPGGRWQAGLPVAGSRLRVVTLVEHPFVFTREVDEEGQC
PAGQLCLDPQTNSSEVLNQLFRELEQTNSSSLPNDMRKCCYGYCIDLLEKLAEDMHFQYD
LYIVGDGKYGAWKGGRWTGLVGDLLSGKADMAVTSFSINSARSRVIDFTSPFFSTSLGIL
VRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFITLYEWNSPFGMTPHGRNRIRVFSY
SSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEE
VSGIHDVKLHHSSLGFRFGTVRESSAEDYVKKSFPEMHEYMKRFNKPTTPDGVSTLKIDP
PQLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTRNVSEYVSRYKS
EGYMDILHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCVGVAGALLTLLGEHTFF
RFILPQLRHQQRFKYWLHTSQKIHRALNMGCDDERKSEFESSDRCPTLCLSENCNLHRLP
PSTSSPPPSTSSTSPSTSTTKWNNQSAKVGRENKEHNKRVHFNLETLNSYQLQAPPTGSE
RGRRGLVGSPPTQLCSNGGPNPSLSLVLSPPACSGLSTPWEEELQELQGRIEEFRGQLRA
ALARRAELQRTLVRQRLGQSQTSSESNSSTTTITTTNTLTKDINKGR
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagtgctctccagattcttggcataccttcacgtcgggctccaggtcgctctc
cagatgtttatttacccttgtcatctgcatccccagccctgtcacatcctggcacgcatt
ggacacacagtgcgcttgggtgcgcttctgccgacccgccagcaatccaggatacaaggc
gccctcaaccgcgccctggttcacctccggcaaagtgggaacaacttcttgccgtacaac
ctgagcttggaagtattgtcccgagagccgctcaatggagacccggagtccatgttcagg
tgcgtgtgtcaggatatcgttgttcagggagtctcggctgtgcttgcgttccctcagagc
cacgaggagctcatacaagtggagttcatgtcctcgtttttggaaatacctttcatcagc
atcattgaagagggcgaacctcttaagacacagaaccgcttccatttacagatgatgaca
cgtacgcccccttcaggactctcggagctgctgttggcagtgttgctaaagggaggctgg
cagggcggagcggccattctttgtccgggaggtgggaaaacgggaatgctggaagagctt
aaacagcggggccatctgggcttgaatggagcccactggcacctatgggagaccctcaac
ctgtccagactggaggaaaacttgagtgaggacaaggtgatgaagctcctctcacaactc
ctcagcaggactccttctgctccggcgtcttctgtggtgcttttcggctccgaccctgaa
tgtacagccagagtgctgcacagcgcccaccagttgagcattacgttgccacacatgcac
tggatcatgggatatccacttagtctggattctctacactccattggctctcccccgggt
cttctggcttatggggaagtgaatcgcaagcctctgaacttctacattagagataccctg
cagctcattggcagggctgtatatgctgcgaccatggtgagaccagacctggctctgatt
cagaacatggtgaactgcttcgacaagcccaataaacatgagttgccctcctctggacaa
taccttgccaggtttttgtcgaacacttctttcacggggctgacaggcccggtgcgagtg
cagcgctccctctccagggtccttacctcccagcgcttccatatatggagtctacagcga
gaccctctgggccagccaagttgggtgaccgtggcaagctggcagtcgagccatctggaa
atggaagaacagggcttgtggccaggcatgaaccaacaccactgggaggacggcccagag
atcaggcccggcggccgctggcaagcaggactcccagttgcaggtagcagattgcgggtc
gtgaccttggtcgagcacccgtttgtgttcacacgggaggtggacgaggagggccaatgt
ccggcaggtcaactgtgccttgaccctcaaaccaacagctcagaagtcctcaaccagctg
ttcagagagctggagcaaaccaacagcagttcattgccaaatgacatgcggaaatgctgc
tatggatactgcatcgacctgctggagaagttagctgaggacatgcacttccagtatgac
ctttacatcgtaggcgatggaaagtacggggcatggaaaggaggtagatggactgggttg
gtgggcgacctgctcagtggcaaggcggatatggccgtcaccagctttagcatcaactct
gctcgaagccgagtgatagactttaccagccccttcttctccaccagtcttgggatcctg
gtgcgcagcaaggacacggctgcacccatcggtgccttcatgtggccgcttcactggtcc
atgtgggtgggcatctttgtggcactacatatcactgctcttttcatcaccctttacgag
tggaacagtccgtttggcatgactccacatggacgtaaccgcatcagggtcttttcttat
tcatctgcactgaacctctgctatgccatcctgttcggccggaccgtttccagtaaaact
ccgaagtgctggaccggccgcttcctcatgaacctttgggccatattttgcctgctggtt
ctgtccagttacacagccaatctagcagctgtcatggtgggggagaagacctttgaggag
gtgtcagggattcatgatgtcaagctccatcactcgtctctggggtttcgcttcggcaca
gttcgagagagcagtgctgaggactatgtgaaaaagagctttcccgagatgcacgagtac
atgaagcgcttcaacaagcccaccactccggatggagtctctacactcaagatagatccc
cctcagctggatgcctttatcatggataaagctttgctggattacgaggtgtccatagat
gcagactgcaaactcctgactgtaggaaaaccgtttgctattgaaggttatgggatcggg
ctgccccagaactcccctctcactcgcaacgtgtctgaatatgtcagccgttacaagtct
gaaggttacatggacatactgcacgacaagtggtataaagtagttccctgtggaaagagg
gtttttgctgtgacagagactctgcagatgggtatccagcatttttcggggctgtttgtg
ctgttatgtgtgggggtggcaggtgctttactcaccctcctgggagaacacactttcttc
agattcatcctgcctcagctccgccaccagcagagattcaaatactggctccacaccagt
cagaaaatccaccgtgcattaaatatgggttgtgatgatgagaggaaatcagagtttgag
agtagtgacagatgtcccaccttgtgcctgtcagagaactgtaatctccaccgcctgcca
ccctccacctcttctcctccaccctccacctcctcgacttccccttccacttctacaacc
aagtggaacaatcagagtgccaaggtcggtcgagagaacaaagagcataacaagcgtgtc
cacttcaacttggagactctcaacagctaccaactccaagctccgcccactgggtcagaa
aggggcaggcgggggttggtgggaagcccgcccacccagttgtgttccaacggcggtcct
aatcccagtctcagcctggtgctctcacccccggcctgttctggactctcaacaccatgg
gaagaggagctgcaggagcttcaagggaggattgaggagtttcgcggccagctcagggcc
gccctggccaggcgagccgagctccagcggaccctggtcagacagcggctcggtcaatct
caaacaagctcagaatctaattctagcaccaccacgattaccaccaccaacaccctgacc
aaagacatcaacaaggggaggtga
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