Carassius auratus (goldfish): 113117353
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Entry
113117353 CDS
T07313
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113117353
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113117353
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113117353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
113117353
NCBI-ProteinID:
XP_026141756
Ensembl:
ENSCARG00000069424
UniProt:
A0A6P6R8H3
LinkDB
All DBs
Position
17:14983138..14991663
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AA seq
739 aa
AA seq
DB search
MEMELSTDVEKLSEASFLHSTSETSETQDIDTDDLLELNQFDGLPFSSRYYKLLRERKAL
PVWGAKCEFMASLMSSQIVIVTGTAKTGQSTQIPQWCAEFCLSAQYQNGMVVCTQIHQQS
TVELALRVADEMDVNIGNEVGYSIPLQTCCSPDTVLRYCTDDVLLREMMSDPLLEQCGVV
VIDQAQERTVSTDLLLGLLKDVLLARPELRLVILSAPHSAEKLLRHYGSTPQIRLDGPQP
CEVVYGSGRGGVKDYLCSALRLALEIHQNQKHGDIVTFLATEQEIECAHAILRREGANLA
VSHGELVPVSLCPEQGDSPSVISEESKSRRVFLTCSPSEDLFWAVHSIRFVIDAGVQKRY
VYNPRIRANSIVIRPISKSQAESRKQLAGPTGKCFCLYQEDTSLPAESVPHILESDITST
VLFLKRMEIAGLSHCDFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLEPQ
MAKTLLASCEFDCVSEVLTIAAMLTAPSSFLTPPVEVRQKALLCHQRFQHAEGDHFTLIN
IFNAYQYAKEGPYSNVEGWCEDHFLSLSALQTADAIRSELTEILKRLELPVSLPAFGSKS
NSLNIRHALLAGFFMQVARDIDGSGNYFMLTHKHVAQIHPLSGYGTEMHKKNLPEWVLYH
EHTLSENNCIRTVSQISAHEFIQMAPQYFFYNLPPSESKDLLQHIIDHGSAAPCKGKRKP
QTPSSPASEEQSHERCTIQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagctatcaacagatgtggagaaactatctgaagcctcttttctacactct
acgtctgaaaccagcgaaactcaagatattgatacggatgatctgctagagttaaatcag
ttcgacgggctcccgttttcttcaagatattacaaactattaagagaaagaaaagctctg
cctgtgtggggagcgaaatgcgagtttatggccagtttgatgagcagccagattgtgata
gttactggcacagctaaaacaggacaaagcactcagatccctcagtggtgtgcagagttt
tgcctgtctgcgcagtatcagaacggcatggtagtgtgcactcagattcatcaacagagc
acggtggaactggccctgcgtgtggctgatgagatggacgtcaacatcggcaatgaggtt
ggatacagcatcccacttcaaacctgctgctcccctgacactgtactgagatactgcact
gatgatgtgttgctccgggaaatgatgtcggaccccctcttggagcagtgtggcgtggtg
gtcattgatcaggcccaggaacgcaccgtcagcacagacctgctcctcgggctgctcaaa
gatgtgctcctcgcacggccagagctcaggctggtcatcctcagcgcccctcactccgct
gagaaactgctacgtcactatggaagcactcctcagatccggctggatgggccgcagccg
tgcgaggtggtgtacggtagcgggagaggaggtgtgaaggattacctctgctctgctctt
agactggctctggagatacatcagaatcaaaagcatggagacattgtgacatttctggca
actgagcaagagattgaatgtgcccatgccattttgcggagagagggtgccaatcttgca
gtatctcatggcgagctggtgcctgtgtctctgtgccctgagcaaggagacagtccctca
gtgatctctgaggagagcaagagtaggagagtcttcctcacctgcagccccagtgaagat
ttgttctgggccgttcacagcattcgctttgtgattgatgctggagtgcaaaaaagatat
gtgtacaatcctagaatcagagccaattccattgttattcgtcctatcagcaagagccaa
gctgagagccgcaaacaacttgcaggcccaacaggcaagtgtttctgtttgtatcaagag
gacacatcacttcctgctgagagcgtccctcatattcttgagtctgacatcacttccact
gtgctcttcctgaagcgcatggaaattgctggcctgagccactgtgactttattgacaga
ccagatccagaaggcctgatgcaagctttagaggaacttgactatctggctgctttggat
gatgacggaaatctgtccgagattggaattatcatgtcagagtttcccctggagccacag
atggctaagactttgcttgcgtcttgcgaatttgactgtgtgagcgaagtgctgaccatc
gctgccatgctaacagctccaagcagtttccttacacccccagtggaagtgagacagaag
gccttactgtgtcatcagaggttccagcatgcagagggagaccacttcacccttattaac
atctttaatgcttaccaatatgctaaggaagggccatactctaatgtggaaggatggtgt
gaagaccatttcctcagtctgtctgctcttcagacagcggatgcgatacgctctgagcta
acagaaatcctcaaacgactagagctgccagtgtctttacctgcctttggctctaaaagc
aacagcctgaacatcagacatgccctactagctggcttcttcatgcaggtggcgagggac
attgacgggtcagggaattacttcatgctgacccataaacatgtggctcagatccacccg
ctgtctggctatggaaccgagatgcacaagaagaacctgccagaatgggttctgtaccat
gagcacacgctgtcagagaacaactgcatcagaacggtctctcagatctcagcacatgag
ttcattcagatggcgccgcagtacttcttctacaacctgccacctagtgagagtaaagac
ctactgcagcacattatcgatcacggttcagctgccccatgtaaaggcaaaagaaaaccc
cagacccccagcagccctgccagtgaagagcagagccatgagcgctgtaccatacagtga
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