Carassius auratus (goldfish): 113117620
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Entry
113117620 CDS
T07313
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113117620
03015 mRNA surveillance pathway
113117620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113117620
03041 Spliceosome [BR:
caua03041
]
113117620
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113117620
Spliceosome [BR:
caua03041
]
Complex C
Other components
EJC/TREX
113117620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
113117620
NCBI-ProteinID:
XP_026142194
Ensembl:
ENSCARG00000004269
UniProt:
A0A6P6R8W6
LinkDB
All DBs
Position
17:complement(22609246..22614752)
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AA seq
664 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKSVDENIRKLTGRDPSELRPGQIRRNTIAGPGGGRGRGINL
LRRGLSDSGGGPPAKQRDIAGALLRLAGDERARRDSRHDSDAEDDDDVKKPALQSSVVAT
SKERTRRDLIQDQTIDERGKQRNRRMFGLLMGTLQKFKQESTVSTDRLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRAKQTELRLLEHKVELAQLQEEWNAHNSKLIKFIRTKTKP
PIFYLPGRMCSATQKLLEESQKKLNGVFDERREAFAEQLNKMEARPRRQSQRTGDREMED
SRRAEETKKEDQEEGKAGLGRTGNRHDVEMEDEEEDVVEEEGEESSEIREREGDQEQEQS
EKDKHEESEQKAEEEDEDEEDVGTSEAKEEGEEQMEVTEVVREDEAQGKLQVESPEATVE
EVGNVQKEEEQETENETQEEVVTDSQQAPESQMEIHPEEGKEPQLDVPAPSATEHDPKQV
ETVPETQQRPLEPDPEIPQEQSQEPSVQPQEAKADPKEASKETDEARGRAKVSAKRSKSR
SSSSSSSSSSSSSSSSGSSSSSSGSSSSSSGSSSSSSSSRSRSHGRDRDGRDHKRRRRPS
DRERGKSGSERGHKSSKGSGRESKGSKDKNPKPDKKRMSSEGSRSGRRSSRSERDRKSNR
KDRR
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgcgaagcttgcaagaccagctggaaaaagccaaggaaagcttaaag
agcgtggacgaaaatattcgaaaactaaccggcagagatccaagcgagttaagaccgggt
cagattaggagaaataccatcgcaggcccaggtggaggtagggggcgtggaatcaatttg
ctgaggcgtggactctcagatagtggtggaggacccccagccaaacagagagacatcgca
ggggcactcttgaggctggcaggggatgagcgagcaaggagagattcacgccatgacagc
gacgctgaggacgatgacgatgtcaaaaaaccagcgttgcagtcatctgtggttgctacc
tccaaagaacgtacgcgccgagatcttattcaggatcagaccattgatgagagaggaaag
cagagaaaccggcgcatgtttggcctattgatgggaacattgcaaaagtttaagcaggaa
tctactgtgtccacagaccggttaaaaagacgccaagaaattgagcagaaattggaagtg
caggcagaacaggagcgtaaaaaagttgagagtgaaaggagagagctctttgaagaaaga
cgtgccaaacaaacagagctgcggcttctggagcacaaagtggagctcgctcaactgcaa
gaagagtggaatgcacataattcaaagctcatcaagttcattcgcacgaagaccaagccc
ccgatcttctacctgccggggcgaatgtgctccgctactcaaaagctcctggaagagtct
cagaaaaaattaaatggtgtgtttgatgagagacgtgaagcctttgcagagcaactcaac
aaaatggaggctcggccaaggcgtcagtcccagaggacaggtgacagagaaatggaggat
agccgtcgggctgaagagacgaagaaagaagatcaagaggagggtaaggctggattaggg
cggacaggtaacaggcatgatgtggaaatggaggacgaggaggaagatgtagtcgaggag
gaaggagaggagagctcagagattagggagagggagggggatcaagagcaggagcagagt
gagaaggataaacatgaggagagtgagcagaaggcagaggaggaagatgaggacgaggag
gatgtaggaacaagtgaggctaaggaagagggggaagagcagatggaggttacagaagtt
gtgagggaagatgaggcacagggtaagttgcaggttgagagtccagaagccacagttgaa
gaggtaggtaatgtgcaaaaggaggaagagcaggagacagagaacgagactcaggaggaa
gttgtaacagactcgcagcaagcccccgaaagccagatggaaatacatcctgaagagggt
aaagagcctcaactggacgtcccggcccctagtgcgacggaacatgaccccaaacaagtt
gaaacggtgcctgagacccaacagagaccacttgaacctgacccagaaatccctcaagag
caaagccaagaaccatcagtccaaccacaagaagccaaagcagacccaaaggaagctagc
aaggagaccgatgaggctcgtggacgggccaaagtcagtgccaagaggagcaagagccga
agtagcagcagttcttcttccagttcttcttcaagctcctcctccagtggctccagctcc
tcttccagtggctccagtagcagttcttctggctcttcctcatcgtcttccagttcacgc
tcccgtagtcacggcagggatagagacggccgagaccacaaacgccgccggagaccatca
gacagggagcgtggaaagagcggcagcgagagaggacacaagtcctcaaaaggcagtgga
cgagaaagcaagggctccaaagacaagaaccccaaaccagacaagaaaaggatgagttcg
gaaggaagcaggtcagggaggaggtcctccagaagcgagagggatcggaagtctaatcgg
aaggatcgacgttga
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