KEGG   Carassius auratus (goldfish): 113117620
Entry
113117620         CDS       T07313                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03013  Nucleocytoplasmic transport
caua03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113117620
   03015 mRNA surveillance pathway
    113117620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113117620
   03041 Spliceosome [BR:caua03041]
    113117620
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     113117620
Spliceosome [BR:caua03041]
 Complex C
  Other components
   EJC/TREX
    113117620
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 113117620
NCBI-ProteinID: XP_026142194
Ensembl: ENSCARG00000004269
UniProt: A0A6P6R8W6
LinkDB
Position
17:complement(22609246..22614752)
AA seq 664 aa
MAVAVRSLQDQLEKAKESLKSVDENIRKLTGRDPSELRPGQIRRNTIAGPGGGRGRGINL
LRRGLSDSGGGPPAKQRDIAGALLRLAGDERARRDSRHDSDAEDDDDVKKPALQSSVVAT
SKERTRRDLIQDQTIDERGKQRNRRMFGLLMGTLQKFKQESTVSTDRLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRAKQTELRLLEHKVELAQLQEEWNAHNSKLIKFIRTKTKP
PIFYLPGRMCSATQKLLEESQKKLNGVFDERREAFAEQLNKMEARPRRQSQRTGDREMED
SRRAEETKKEDQEEGKAGLGRTGNRHDVEMEDEEEDVVEEEGEESSEIREREGDQEQEQS
EKDKHEESEQKAEEEDEDEEDVGTSEAKEEGEEQMEVTEVVREDEAQGKLQVESPEATVE
EVGNVQKEEEQETENETQEEVVTDSQQAPESQMEIHPEEGKEPQLDVPAPSATEHDPKQV
ETVPETQQRPLEPDPEIPQEQSQEPSVQPQEAKADPKEASKETDEARGRAKVSAKRSKSR
SSSSSSSSSSSSSSSSGSSSSSSGSSSSSSGSSSSSSSSRSRSHGRDRDGRDHKRRRRPS
DRERGKSGSERGHKSSKGSGRESKGSKDKNPKPDKKRMSSEGSRSGRRSSRSERDRKSNR
KDRR
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggcggtggccgtgcgaagcttgcaagaccagctggaaaaagccaaggaaagcttaaag
agcgtggacgaaaatattcgaaaactaaccggcagagatccaagcgagttaagaccgggt
cagattaggagaaataccatcgcaggcccaggtggaggtagggggcgtggaatcaatttg
ctgaggcgtggactctcagatagtggtggaggacccccagccaaacagagagacatcgca
ggggcactcttgaggctggcaggggatgagcgagcaaggagagattcacgccatgacagc
gacgctgaggacgatgacgatgtcaaaaaaccagcgttgcagtcatctgtggttgctacc
tccaaagaacgtacgcgccgagatcttattcaggatcagaccattgatgagagaggaaag
cagagaaaccggcgcatgtttggcctattgatgggaacattgcaaaagtttaagcaggaa
tctactgtgtccacagaccggttaaaaagacgccaagaaattgagcagaaattggaagtg
caggcagaacaggagcgtaaaaaagttgagagtgaaaggagagagctctttgaagaaaga
cgtgccaaacaaacagagctgcggcttctggagcacaaagtggagctcgctcaactgcaa
gaagagtggaatgcacataattcaaagctcatcaagttcattcgcacgaagaccaagccc
ccgatcttctacctgccggggcgaatgtgctccgctactcaaaagctcctggaagagtct
cagaaaaaattaaatggtgtgtttgatgagagacgtgaagcctttgcagagcaactcaac
aaaatggaggctcggccaaggcgtcagtcccagaggacaggtgacagagaaatggaggat
agccgtcgggctgaagagacgaagaaagaagatcaagaggagggtaaggctggattaggg
cggacaggtaacaggcatgatgtggaaatggaggacgaggaggaagatgtagtcgaggag
gaaggagaggagagctcagagattagggagagggagggggatcaagagcaggagcagagt
gagaaggataaacatgaggagagtgagcagaaggcagaggaggaagatgaggacgaggag
gatgtaggaacaagtgaggctaaggaagagggggaagagcagatggaggttacagaagtt
gtgagggaagatgaggcacagggtaagttgcaggttgagagtccagaagccacagttgaa
gaggtaggtaatgtgcaaaaggaggaagagcaggagacagagaacgagactcaggaggaa
gttgtaacagactcgcagcaagcccccgaaagccagatggaaatacatcctgaagagggt
aaagagcctcaactggacgtcccggcccctagtgcgacggaacatgaccccaaacaagtt
gaaacggtgcctgagacccaacagagaccacttgaacctgacccagaaatccctcaagag
caaagccaagaaccatcagtccaaccacaagaagccaaagcagacccaaaggaagctagc
aaggagaccgatgaggctcgtggacgggccaaagtcagtgccaagaggagcaagagccga
agtagcagcagttcttcttccagttcttcttcaagctcctcctccagtggctccagctcc
tcttccagtggctccagtagcagttcttctggctcttcctcatcgtcttccagttcacgc
tcccgtagtcacggcagggatagagacggccgagaccacaaacgccgccggagaccatca
gacagggagcgtggaaagagcggcagcgagagaggacacaagtcctcaaaaggcagtgga
cgagaaagcaagggctccaaagacaagaaccccaaaccagacaagaaaaggatgagttcg
gaaggaagcaggtcagggaggaggtcctccagaagcgagagggatcggaagtctaatcgg
aaggatcgacgttga

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