Carassius auratus (goldfish): 113117712
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Entry
113117712 CDS
T07313
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113117712
Membrane trafficking [BR:
caua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113117712
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
113117712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Prp19
Beta-prop_IFT140_1st
WD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Synaptobrevin
CFAP43_N
WD40_like
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
113117712
NCBI-ProteinID:
XP_026142382
Ensembl:
ENSCARG00000063553
UniProt:
A0A6P6RAB8
LinkDB
All DBs
Position
17:24945390..24984499
Genome browser
AA seq
1168 aa
AA seq
DB search
MKKFNIRKVLDGLTSSSSSAASLQSGNRENDMIQETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGALRLFGRAGVECFCQHESGSAVIQLEFLVNEGALVSALADDSIHL
WNLRQKLPAVLHSLKFNRERITFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGYVIMWN
KAIELSSKTHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSKKADYRYSYDEAIHSVA
WHHEGKQFVCSHSDGTLTTWNIRAPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDPFMILCGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVLIDLAQIGYPIFENPYPLSIHESPVTCCEYFADCPAEVIPALYSVGSRQK
RQGFSKKEWPISGGNWGQGTLSFSEMIITGHADGSIKFWDASALMLQVLYKLKTAKVFEK
PRSKEEKSSTEIVDEDPFAIQILSWCPESRVLCVAGVSAHVIVYRFSKQEVTTEVVQLLE
VRMQCELNEVESPECGGEQASAVSTPGTQSSPQTSLPQSHPSTSSNNSSDGLRDNVPCLK
VRSSPLKQSAGYQVELLIQLVWVSGEPPQQITSLAVNSAYGLVAFGNGNGLAVIDYLQKT
LLLNMSIAELYGSTDPHHRQPRSPRKTRQPSAGLCDGNDASAAPEEKCKSPTGSGSLCNS
DEDSKQKLIDRGTMHYKQLFCLRRSFILFDWFYSIHFPVKSKSKRISKTVANDFAKISRK
INMIADQKDDARDNSFSRSRSSSVTSIDRESREVISSFYFCDSLSKKSETVAVPSLWVGT
SLGSMLAIVLTVPSTPEQRMQQPLGVAFCGPVVRLKGGILRMAQLDASGTLLPHVYESWY
EPNAPEEERERPQRRRPTSPPSTLENPDCQYAVVCSEKQAKVVAMPSQNCVYEHNITETS
FVLRADVVTMTAGVGIACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFSNQGQ
ALYLTSPTEIQRITYIQETCDNLQEMLGELFTPVETPEAPNQGFFKGLFGGGAQSLDRED
LFGEVSAGKASRSLAQHIPGPGGMEGMKGAASGVVGELARARIALDERGQKLGELEERTA
AMMASADSFSKHAHDVMLKYKDKKWYQL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatatcaggaaggtgttggacggcttgacgtcctcttcctcctccgcc
gcgtcccttcagtcgggaaaccgggagaatgacatgattcaggagaccctgcagtcagag
catttccagctctgcaagacagtgcgacatggctttccctatcaaccctcctccatggct
tttgaccctgtgcagaaaattttggctattggcacacaaagcggagccctgagactattc
ggccgagctggagtggagtgtttctgccagcatgagagcggatcggcggtcatccagcta
gagtttcttgtaaatgaaggtgcgctagtaagtgctttggcagatgacagtattcatttg
tggaatctgaggcaaaaacttccagccgtccttcattctcttaaatttaaccgggagagg
atcacgttttgccatttgccgtttcagagtaaatggctgtacgtgggcacggaaagaggg
aacattcacattgtcaatgtggagtccttcaccctctcaggctatgtgatcatgtggaac
aaagccatcgaactttcctcaaagactcatcctggacctgtagttcatatcagcgataac
cctatggacgaagggaaacttttaattggttttgagtgtggcatagttgtgctgtgggac
ttgaaatcgaagaaagctgactatcggtacagctatgatgaggcgatccactccgtggca
tggcatcacgaggggaaacagtttgtgtgcagtcactcagatggcacgcttaccacatgg
aatatacgcgctcctgccaagcctgcccagatcattacgccacatggtaaacagcccaag
gatggaaagaagccggagccttgcaagcccatcttgaaagtggagtacaaaactaccaga
gcaggggacccattcatgatactgtgtggaggtttgtcatatgatacagtgggtagacga
gcctgtctgactgtgatgcacgggaaaagcactgcagtgctggagatggactaccccata
gtggatttccttacgctgtgtgaaaccccatatccaaacgatttccaggagccttatgcg
gttgttgtcctgctggagaaggatttggttctcattgatcttgcacaaattgggtatccg
atctttgagaatccatatcctctgtccatccacgagtctccagtgacctgctgtgaatat
tttgcggactgtccagctgaagtcattcctgcactttactccgtgggctccagacagaag
agacaagggttcagtaagaaggaatggcctataagtggaggtaactggggccagggaaca
ctaagtttctcagagatgatcatcactgggcatgctgatggatcgatcaagttttgggat
gcctcagcattaatgctgcaggttttgtataagctgaaaacagcgaaggtgtttgagaag
ccccgcagtaaagaggagaaatccagcactgaaattgtggatgaagatccgttcgccatc
cagattctgtcctggtgtccagagagccgtgtcctctgtgtggctggagtctcggctcat
gtcatagtgtacaggttcagcaaacaggaagtcaccactgaagtggttcagctcctggag
gtgcgtatgcagtgtgagctgaatgaagtggagtctcccgagtgtggaggcgagcaggcg
tcagctgtgtccaccccaggaacccaatctagccctcagacctccctgcctcagtcccac
ccctccaccagcagcaacaactcgtctgacggcctgcgagataacgtgccctgtctcaag
gtcaggagttctcctctcaaacagtctgcggggtaccaggtggagctgctcattcagctg
gtgtgggtcagcggggagccgccacaacagatcaccagcctggccgtcaactctgcatat
ggcctagttgcttttggcaatggtaatggacttgccgtgattgattaccttcagaaaaca
ctgcttctgaacatgagcatagctgagctgtatggatcaacagatcctcaccacagacaa
ccgcgctcgccccgcaaaaccagacagccctcagcaggtctttgtgatggtaatgatgca
tcagccgcaccagaggagaaatgcaaatcaccaacaggctccggttcactgtgcaattct
gatgaagacagcaaacaaaagttaattgacaggggtacgatgcattataaacagcttttt
tgtcttaggagatcttttattttatttgattggttctattcaatacattttccagtgaag
tccaaaagcaagcggatatccaagactgttgccaatgactttgctaagatatcccggaaa
attaacatgattgctgatcagaaagatgacgccagggacaactcattcagccgctcacgc
agctccagtgtgaccagcattgacagagagtcacgtgaggtcatttcttccttctacttt
tgtgactctctgtccaagaagagcgagactgtggcagtgcccagcctgtgggtgggcacc
tcattgggcagcatgctggccatcgtcctcactgtgccctccacaccagagcagaggatg
caacagcccttgggcgtcgctttctgtggtccagtcgtgcgcttgaagggaggtattttg
cgcatggcccagctggacgccagcgggacccttctgccccatgtttacgagtcctggtat
gagcccaacgcccctgaggaggagagagaacggccacagagacgccggcccacctcgcct
ccttcgactctggagaacccggactgtcagtacgctgtggtctgctcagagaaacaggcg
aaggtggtggcaatgccctctcaaaactgtgtctatgaacacaacatcacagagacctcc
ttcgtactgagagctgatgtggtgacgatgaccgcaggggtcggcatcgcctgcttctgt
gccaatggccatatcatgaccctcagtttgcccagcctgcggccactgctagatgtgaac
taccttcccctgacagacatgaggatagctagaaccttctgtttctcaaaccaaggccaa
gccctgtacctcacatcgcccactgagatccaaagaatcacctatatccaggaaacctgt
gataacctgcaggagatgcttggagagctgtttactccagtggagacaccagaggctcca
aaccaaggcttcttcaagggtttatttggaggcggggctcagtctttagaccgagaggat
ctgttcggagaggtgtctgctggtaaagcttcacgcagcctggcgcagcacatcccaggt
ccaggtggtatggagggcatgaagggggccgcgtccggtgtggtgggagagttggcacgg
gcgaggatagctctggatgagagaggacagaaactaggcgagctggaggagaggacagca
gccatgatggccagcgctgactccttctctaaacacgcgcatgatgtgatgctgaaatac
aaggacaagaaatggtaccagctctga
DBGET
integrated database retrieval system
