Carassius auratus (goldfish): 113117829
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Entry
113117829 CDS
T07313
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
caua04054
]
113117829
Pattern recognition receptors [BR:
caua04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
113117829
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
113117829
NCBI-ProteinID:
XP_026142547
UniProt:
A0A6P6RAT2
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Position
17:complement(27256945..27267269)
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AA seq
1182 aa
AA seq
DB search
MIGLSSWTVASTMSVNERRGEEGAVRTNKEVSPKPCLESMKSFESIGCPPNISDSVSSNA
FKEEGTVQTYKAASLKHGLESMKSFESIGSPPNISDSVSSNAFKEEGTVQTYKAASLKHG
LWSRKRFESIGSPPNISDSDSSNSFKEDAVQKHKEVCLEPSVSKSNTSFGSPRNISDGAV
ISDPDKQNVKATALQRDGLLEETDDMQHNSLQPVNDVLKRVKGQHKTSMKNKYERLFEGI
KLEKYQTLLNKIYTQLFIVEGESEGVNEEHEVLQMEKVRTQETLIYCNDIFKPLNQPGCE
VKDKIKTVLTKGIAGIGKTVSVQKFILDWTEGKANQDVDFMFVLPFRELNLIKDHQYSLH
RLLLDFHPELQDLDSKIYEECKVVFIFDGLDESKFALMFSDDEKVCDVTESSSVGVLMSN
LIRGELLPSALIWITSRPAAANQIPSKYIHRVTEIQGFTEPQKEEYFRKRISDEHQANRI
ISHIRRSRSLHIMCHIPVFCCISATVLQNLLEQDDSAEIPQTLTDMYIHFLLTQINMRNK
KYDENDLEKLLKSSRDVIVKLAELAFKQLMKGNVMFYEEDLIESGIDVTAASVHSGICTE
IFKEESVIHQRKVYSFIHLSFQEFLAAFFVFYCHVVENMNVLKFFMETWYRFNELSLYEL
LQAAVNKSLQSKNGHLDLFLRFLLGMSLESNQRLLKDLLTHTVNSSEAINRITQYIKDSI
KGDQLFLADRCINLFHCLLEMKDQTLYREIQEFVKSENQSVRKLSPSHCSTIAYMLQISE
EVLNEFDPRKYNTSDEGRRRLIPAVVNCRKALLPYCNLTDQCCESLSSCLQSSNSLRELD
LSNNDLQDSGVKLLSDGLKSSHCNLNILRLKCCSLTGQCCGSLSSSLQSSNSLRELDLSN
NDLQDSGMKLLSDGLKRSHCQLNILRLSGCMVTEEGCCFLASALSSNPSHLRELDLSYNH
PGQSLVKLLSDPNYSLDTLNVDHGGEKKIKPGLQKYACDLTVDPNTANTFLTLSERNRKM
THVREKQPYPDHPDRFDECVQVLCRESLSGRCYWEVKWSSGHIFISVAYKRMERKGTGDC
WFGHNEISWCLYCVMNRFIVKHNSESKLLSLSLKCSNRVGVYLDWSAGTLSFYSVSDTHT
LTHLHTFNTTFTEPLYAGFGVYYDSSVSLCEISQPQSQLRHS
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgattggactgagttcctggactgttgcatctacaatgagtgtcaatgagagaagagga
gaggagggtgctgttcggacaaataaagaagtatctccaaaaccctgtcttgagtctatg
aagagcttcgagtccattggctgcccccctaatattagtgattccgtctccagcaatgcc
tttaaagaagaaggtactgttcagacatataaagcagcatctctaaaacatggtcttgag
tctatgaagagcttcgagtccattggcagcccccctaatattagtgattccgtctccagc
aatgcctttaaagaagagggtactgttcagacatataaagcagcatctctaaaacatggt
ctttggtctaggaagagatttgagtccattggcagcccccctaatattagtgattccgat
tccagcaattcctttaaggaggatgctgttcagaaacataaagaagtatgtctagaaccc
agcgtgtctaagagtaacacatcttttggaagcccccgtaatattagcgatggagcagtg
atttctgaccctgacaagcagaatgtcaaagcaacagccctgcagagagatggactgctg
gaggagactgatgacatgcagcacaattctctccaaccagtgaatgatgtcttgaagaga
gtcaaaggccaacacaaaaccagcatgaagaacaagtatgagagattatttgaaggaata
aaactagaaaagtatcaaacccttctgaacaagatctacacacaactcttcatcgtagag
ggagaaagtgaaggagtgaatgaagaacatgaggttttacagatggagaaagtcagaaca
caagaaactttaatctattgcaatgacatctttaaacccttaaatcaaccaggatgtgag
gtgaaagacaaaatcaagactgttcttactaaaggcattgctggaattggaaaaaccgtc
tctgtgcagaagttcattctggactggacagagggaaaagccaatcaggatgtagatttc
atgtttgtgcttccatttcgagagctgaacttgattaaagatcatcagtacagtcttcac
agacttctgctggactttcatcctgaacttcaagatctggactcaaagatttatgaggag
tgtaaagttgtgttcatctttgatggtttggatgaaagcaaatttgcactgatgttttca
gatgatgagaaagtttgtgatgtgactgagtcttcatcagtgggtgtgttgatgtcaaac
ctcatcagaggagagctgcttccctctgctctcatctggatcacatccagaccagcagca
gccaatcagatcccctcaaaatacatccaccgtgtgacagaaattcagggattcactgag
cctcagaaggaggaatattttaggaagagaatcagtgatgagcatcaagccaacagaatc
atctcacacattagaagatcaagaagcctccacatcatgtgtcacatccccgtcttctgc
tgcatctcagccactgtgcttcaaaaccttctggaacaagatgacagtgcagaaatccct
caaactctgactgacatgtacatccacttccttctgactcagatcaacatgaggaacaag
aagtatgatgagaacgatctagagaaactcctgaagtccagcagagatgtgattgtgaaa
cttgctgaactagctttcaaacagctgatgaagggcaatgtgatgttctatgaggaggac
ctgattgaaagcgggatagatgtcactgctgcctcagtgcattctgggatttgcactgag
atctttaaggaggaatctgtgattcatcagaggaaagtctacagcttcattcatctgagc
tttcaagagtttctagctgctttctttgtgttttactgccatgttgttgagaacatgaat
gtacttaagttctttatggaaacgtggtacaggttcaatgaactctctctgtatgagctg
ctacaagcagcagttaataaatcattgcagagtaaaaatggacacctggatcttttcctg
aggttcctgctgggcatgtcactggagtccaatcagagactcttaaaggatctattgaca
cacacagtgaacagctcagaggcaatcaacagaatcacacagtacattaaagactctatc
aagggtgaccaacttttcttagctgacagatgcatcaatctgttccattgtctgcttgaa
atgaaggatcagactctgtacagagagattcaagagtttgtgaaatcagagaatcaatca
gtgaggaaactctctccatctcactgctcaacaatcgcctacatgcttcagatatcagag
gaggttctgaatgagtttgatccgaggaaatacaacacatcagatgagggtaggaggaga
ctgataccagctgtggtgaactgcagaaaagctctacttccatactgtaatctcactgat
cagtgctgtgaaagtttgtcttcatgtctgcaatcatcaaactcactgagagagctggac
ctgagtaacaatgacctgcaggattcaggagtgaagcttctctctgatggactgaagagt
tcacactgtaatctcaacatactgaggttgaaatgttgcagtcttactggtcagtgctgt
ggaagtttgtcttcatctctacaatcatcaaattcactgagagagcttgacttgagtaac
aatgacctgcaagattcaggaatgaagctgctctctgatggactgaagagatcacactgt
caactcaacatactgagattatctggctgtatggtgacagaggaaggctgttgttttctg
gcttcagctctgagttcaaacccctcacacctgagagagctggatctgagctacaatcac
ccaggacaatcattagtcaagctgctctctgatccaaactacagcctggacacactcaat
gtggatcatggaggagagaaaaagattaaaccaggactacagaaatatgcatgtgatctc
actgtggatccaaacacagcaaacacttttctcactctgtctgagaggaacagaaagatg
acacatgtgagagagaagcagccgtatcctgatcatccagacagatttgatgagtgtgtt
caggttctgtgtagagagagtctgtctggacgctgttactgggaggttaaatggagcagt
ggtcatatttttatatcagtggcatataaaagaatggagaggaaaggaacgggtgactgt
tggtttggacacaatgaaatatcctggtgtctgtactgtgtaatgaaccgattcattgtc
aaacacaatagtgagagcaaattgttatctctcagtttaaaatgctctaacagagtagga
gtgtatctggactggtcggccggcacactgtccttctacagcgtctctgacacacacact
ctcacacacttacacacatttaacaccacattcactgaacccttatatgctggatttggg
gtttattatgatagttcagtttctttgtgtgagatcagtcaacctcagtcacaactgaga
cacagttga
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