Carassius auratus (goldfish): 113118342
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Entry
113118342 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04115
p53 signaling pathway
caua04120
Ubiquitin mediated proteolysis
caua04137
Mitophagy - animal
caua04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113118342
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113118342
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113118342
09143 Cell growth and death
04115 p53 signaling pathway
113118342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113118342
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113118342
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
113118342
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
113118342
NCBI-ProteinID:
XP_026143213
UniProt:
A0A6P6RDE1
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All DBs
Position
18:8744033..8763378
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AA seq
334 aa
AA seq
DB search
MSATIRLQPVYSWKGVLKLFSCIAARTASKPKEVHTFQRKKKDVLGNHMDEEMSRQTATA
LPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPK
LTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSC
PCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFH
FMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIA
TAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctactattagactacagcccgtgtactcatggaagggggtcctcaagctcttc
tcttgcatagcggccagaactgctagtaaacctaaagaggtccacacatttcaaagaaag
aagaaagacgtacttggaaatcatatggacgaagaaatgagtcgccagactgccacagcg
ctgcccacaggaacctctaagtgtcccccttctcagcgcgtccctaccttgtcgggcacc
actgcgtccaacagtgacctcgccagcctgttcgagtgtccggtctgttttgactatgtg
ctgccacccatcctgcagtgccagagcgggcatttggtttgtagcaactgcaggcccaaa
ctcacctgctgccccacctgcagaggccctctcggttcaatccgcaatctggccatggag
aaagtggccaactcagtgcttttcccatgcaagtatgcctcatcgggctgcgaagtcaca
ctaccacacacagacaaagctgaacacgaggagctttgtgaattccggccatactcttgc
ccctgtcctggggcctcctgcaagtggcagggatctctcgacgccgtcatgccccacttg
ctgcaccagcacaagtccataaccacgctacaaggtgaggatattgtcttcctggccaca
gacatcaacttgcctggggcggtggactgggtcatgatgcagtcatgcttcggcttccat
tttatgctagtgctggagaagcaggagaaatatgacggccaccagcagttctttgccatc
gtgcagctgattggcacacggaaacaggcagaaaacttcgcataccggctggagttgaat
ggccaccggcggcgactcacctgggaagcgacgccacgttcaattcacgagggcatcgcc
accgccatcatgaacagtgactgccttgtgtttgacacctccattgcccagctgtttgca
gagaacggcaacctgggcatcaacgtcaccatatccatgtgctga
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