Carassius auratus (goldfish): 113118356
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Entry
113118356 CDS
T07313
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113118356
Membrane trafficking [BR:
caua04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113118356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
Motif
Other DBs
NCBI-GeneID:
113118356
NCBI-ProteinID:
XP_026143236
Ensembl:
ENSCARG00000012263
UniProt:
A0A6P6RCT0
LinkDB
All DBs
Position
18:complement(8966284..8996620)
Genome browser
AA seq
1715 aa
AA seq
DB search
MEDKSLRVADYFVVAGLTDSSKPLEEDVHPEDGGHRSSAQLKAPITDVAVVIRSLGEEVP
RGYTCVECTPSGLPAELNGGSLMGPQIFLCYKRGRDKPPLTDLGVLFEWKKKLKPDCQII
QTTPSGRPANISSSSSQRIYITYRRASENHSNATLAVTDICVIIPNKGETPPHAFCKVDK
NLNSSMWGSSVYLCYKKSLAKTNTLAFKAGLLSRYPEEDYDSFPLPESVPLFCLPTGASI
ECWPSHTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEDYLTDKQRSQLGLQANGLRP
LGSMTVHTNKSICLLSHWPFFDAFHNFLTFLYRYSISGPHTLPIEKHISHFMHKVPFPSP
QRPRILVQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPKNAATLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYEPP
TDISCVDLDTNTITHKEERRSLTWKILPRKACKHLINTLSSLHQQLDEGYQMSREEIQME
AFMSEREPGSGGKSLETLEMEIQEAFLRFMAAILKGYRSYLLPITQAPSEKSTDSSSLFD
LQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTEKGGK
VDSDKPEDTRLIELDKSHRSEHTVYITPPELPALPEGEEPPMVYSYSGFPVLNAQLCELQ
DGPRVPKATSAMRHISPISPAAIFRRSQQEIKSAQRMAKTYSSIPQMWSKCLLRHCHGLW
FICLPAYVSACHSKVRALHTAYDVLRNMQDKKLQPPDEVCYRVLMQLCGQYGQPVLAVRV
LFEMKKAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVIRGVVLFKQVWRRQT
THPKDTHLSDASDLDSVSHGSLDSSNDLAERVSIDTDFTKMDSSDDRSSTGGQSDQGYDS
LSKEEVRLGGGEEQNSSPDMKEKKDRNSCPLSKTVLSKKEESSPMVGIHPSATDGKTSDV
FSEALPKTKRPNSLDIFGEKPIRPSTLDLTPDKTVGEHTNESVSALIEMEAVGGVVSPPK
VAVERTLSCTVAMEKEHIGVERSVSCSSALGRVVERTGIESGFDPLSLMAAETQAHSEGD
NADTPTARRDLAEEIHHYMNNLSSPLSQRSLSVDLKGRQTPSPHSSPCTSAALSSPITSQ
LQPQPRTRLFSSPSLPQGRVRRVREQRPTSLASPSSPTPSSSSFSMDSLLTPTLDVFKIS
FLSAGKGVAEKASRLYSRLSSQTSIAQDSDRVSVSSLGSGDPDCSSLIESDSCVDPDGLS
SPQRDAAQPVTRPKRSPYRSNHCLESPSAPPRLYRQSSLTGPPLTVMKALQTPDVCSDSS
LSQSMQNYAVEIRMSSCSCCNTCESLVYDEEIMAGWTADDSNLNSTCPFCGSPFLPLLNV
DIRNLGDQERSPSQDAHSCQTDTTDEQPQVYDATGNLSSNGKKDPEPVTVPYLSPLVLWK
ELESLLENEGDQAISSAAIVDHHPIVFWNLVWFFRRLDLASSLPGLYLSSKHYCSVSQPL
QISASEDSKNVLVQILWDNPRLHQDPIKPCYLLWNSYCANPAVFEEEEQAVSPELLQSVV
KSIQRNDVYQPMSQILQLLGTKLGFVRQRSLYRDILFLSLVALGKSSINIDAFDREYKMA
YDRLAPSQVKLTHNCDRPPSAGVMECRRTFGLPSL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaagccttcgtgtagcagactactttgtggtggcaggactcaccgactca
tctaagcccctcgaggaagatgtccaccctgaggatggtggccataggagttcagcccag
ctcaaggcgcccatcactgatgtggctgtggtgattcgctccctaggggaggaagtacct
cgagggtatacctgcgttgaatgcaccccctctggacttcctgccgaactgaatggagga
agcctcatggggccgcagatcttcctctgctataagagaggcagagacaaaccgccgctc
acagacctgggagtcctctttgagtggaagaagaaactgaagccggactgtcaaattata
cagaccacaccctctggccgccccgctaatatcagtagctcctcctcccaaaggatctac
atcacatatcggcgtgcctctgagaaccactctaatgccacgctggctgtcacagacatc
tgtgtcattattcccaacaagggagaaacaccaccacatgctttctgcaaggtggacaag
aatctcaacagcagtatgtgggggtcctctgtgtatctgtgctacaaaaaatcgttggcc
aaaaccaacacacttgcattcaaagcaggtcttttgtccagatatccagaagaggattat
gattcctttcctttgcctgaatccgtgcccctgttttgcctgccgacgggagcgtcgatt
gagtgctggccctctcataccaaatattctcttcctgtcttttcaacatttgttcttaca
ggcgcctctggagaaaaggtttatggtgccgccatccagttctatgagccctacccagaa
gactatttgactgacaagcagcgatctcagctgggtctgcaggctaacgggctcaggccc
ctaggatccatgactgtccacaccaacaaaagcatctgccttctctctcactggcccttt
tttgatgctttccataacttcctgaccttcctctacagatactccatctcaggtccacac
actctgcccattgaaaagcatatatcccatttcatgcacaaggttcctttcccttcccca
caaaggccacgcatcctggtacagctgtctccacatgacagcctgatgctgagccagcct
gtttcctccccactccctctgagtggcggaaggctctctacactgctgttgaacctcggc
ccaaaaaatgcagcgactctgctggtgttggctgtgactgaacataagatcctagttcac
tccttgcgtccagctgttcttaccagcgttaccgaggccctggtgtcgatgatttttccc
ttccactggccttgcccatacattcctctctgcccgctggccctggcagacgtgctcagt
gctccatgccctttcattgtaggggtggactcacggtactttgacctctatgagccaccg
acggacattagctgtgtggacctggacaccaacactataactcacaaagaagaacgcaga
tccctgacctggaagatcctgccaagaaaagcctgtaaacatctgatcaacaccctcagc
agtctccaccagcaactggatgagggttatcagatgagccgtgaggaaatacagatggag
gccttcatgagtgagcgggaacctggcagtggcgggaaaagtctggaaaccttggagatg
gagatccaggaggctttcctgcgcttcatggcggccatattgaaaggctaccgttcatac
ctgttgcccatcacacaggctccatctgaaaaatcaactgactccagttctctctttgat
ttgcaaggctttttgaagagtcgcgatcgatcccatcaaaagttttactccctcatgacc
aagactcagatgttcattcgtttcatcgaagagtgctcttttgtcagcgataaggatgca
agccttgctttctttgatgactgtgttgacaagttattcggtacggagaaaggggggaag
gtggatagcgataagccagaagacacaaggcttattgaacttgacaaatcccaccgcagc
gagcacacggtctacatcacccctccagagctgccagcacttccagaaggagaagagcca
ccgatggtttatagctacagtggctttcctgtactgaacgcccaactctgtgagcttcag
gatggtcccagagtccccaaagcaacatcagccatgagacacatcagtcccatcagccca
gctgccatattcaggcgttcccaacaggagatcaaatcagcccagaggatggctaagaca
tactcctccatcccacagatgtggtccaagtgtctgctcaggcattgtcacggcctgtgg
ttcatctgcctgcccgcgtatgtcagcgcctgccactcgaaggtgcgggcgctgcatact
gcttacgacgtgctgagaaacatgcaggacaaaaagttgcagccccctgatgaggtgtgt
taccgggtcctgatgcagctgtgtgggcagtatgggcagcctgttcttgctgtccgggtt
ctttttgaaatgaagaaagccggagtgcagcctaatgctattacatatggatactacaac
agggccgttctggagagcacatggccttcctccaccagagggggatacttcctttgggga
aagctgagaaatgtgattcggggtgtggtgctattcaaacaagtatggaggaggcagacc
acccacccaaaagacacccatctctctgatgccagtgatctcgacagtgtcagccatggc
agtctggacagctctaacgatttggcggagagggtttccattgatacagacttcactaaa
atggactccagtgatgacagatccagcacaggtggtcagtctgatcagggctacgattct
ctgtctaaagaggaggtgagattaggaggaggtgaggagcagaactcatctccagacatg
aaggagaagaaggacagaaactcttgcccattgtccaagactgtactctcaaagaaagag
gagtcatctcctatggttggaatccatccatctgcaaccgatgggaaaaccagtgatgtc
ttttctgaagcccttccaaagacgaaaaggccaaactccctggatatttttggagaaaag
cccataaggccaagcactctggatctaaccccagataagacagtaggagaacacaccaat
gaatctgtttcagcattgatcgaaatggaagcagttgggggcgttgtgagcccacctaaa
gttgctgtggagaggactcttagctgcacagttgccatggagaaggagcatattggcgtg
gagaggagcgtgagctgcagcagtgctcttggacgagtggttgagaggacaggtatcgaa
tcagggtttgatcctctgtccctcatggcggctgagactcaagcccacagtgagggcgat
aatgcagacacccctaccgcccgccgagacctggctgaagagattcaccactacatgaac
aacctgagcagcccgttaagccagcggtctctcagtgtagacctgaagggtcgtcagacc
ccatcccctcacagctctccctgcacgtctgcagcactcagctcccccatcacctcccaa
ctccaacctcagccacgaacacgactcttctcctcgccctctctcccccagggccgcgtg
cgcagggtcagggagcagcggcccacctccctggcctccccttcctcaccgactccctcc
tcttcctctttctccatggactctctgctcaccccgaccctggacgtgtttaagatcagc
ttcctctctgctgggaagggcgttgctgagaaagccagccgactgtattcgcgactttcc
tcccagacgtctatagcacaggactctgaccgggtcagtgtgtcctctctggggtcaggt
gaccctgattgctcctctctgattgagagcgattcctgtgtagaccctgacgggctctct
tccccgcagcgtgacgccgctcaaccggtcacgcgtcccaaaaggagcccttacaggagc
aaccactgcctagaaagcccatctgcaccacctcgactctaccgccagtcctcgctcact
ggtccaccgctgacagtaatgaaagctctgcagaccccagatgtgtgttctgattccagc
ctttctcagtccatgcagaactacgctgttgaaatacgtatgtccagttgttcgtgctgt
aacacctgtgagagtttggtgtatgatgaagagatcatggctggttggacagctgatgac
tctaacctcaatagcacatgccccttttgcggctctccatttctgcctctgctcaatgtg
gacatcagaaacctgggtgaccaggaaagatccccctctcaagatgcacattcttgccag
acagacaccacagatgaacaaccacaagtttatgatgccactggcaatctatccagcaat
ggcaaaaaagaccctgagccagttaccgtgccctatctgagtcctctggtactttggaag
gaactggaaagcttgctggagaacgagggggaccaggccatctcatctgcagccattgtg
gatcaccaccctattgtgttctggaatctggtgtggtttttccgtaggctggacctggcc
agcagcttgccgggcctctatctgagctccaaacactactgcagtgtttctcagcctctg
caaattagtgcatctgaagacagtaagaatgttttggtccagatcctatgggacaatccc
agactgcatcaggaccccatcaagccttgctacttgctctggaattcatattgtgcaaat
cctgcagtatttgaggaggaggagcaggctgtgagcccagagctgctgcagagtgttgtg
aagagcatccagaggaacgatgtctaccagcccatgagtcagatactgcagctattgggc
accaaactgggcttcgtcagacaacggagcttatatagagatatcctgttcttatctttg
gtggctttgggcaagagtagcataaatattgatgcatttgaccgtgaatacaaaatggca
tatgaccgtctggcgccgagccaggtcaagttgacccataactgtgaccgtccacccagc
gctggagtcatggagtgcaggagaaccttcgggctgcccagtctctga
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integrated database retrieval system
