Carassius auratus (goldfish): 113118418
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Entry
113118418 CDS
T07313
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113118418
03036 Chromosome and associated proteins [BR:
caua03036
]
113118418
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113118418
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113118418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
113118418
NCBI-ProteinID:
XP_026143346
Ensembl:
ENSCARG00000026127
UniProt:
A0A6P6RD21
LinkDB
All DBs
Position
18:complement(10353857..10360897)
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AA seq
792 aa
AA seq
DB search
MKHSFLIQVLPMEGGPTETVVEDAVDAFKAKEGKTYQRRREDEEVGAELLQAAGLEQAHV
EGEPVVEAVNSSVEMMVIDSLDPALLQMKTEVMEAAVGAPVGVAGAAHEATVTTVDDTQI
ITLQVVNMEEQQLGLGELQLVQVPVSAVPVTAATVEELQGTLVDAMPKDGEPVICHTLPL
PEGFQVVKVGANGEVETVEQDELQAQDDQAPQQEEEDMVEAQNEDPAWSKDPDYTPPVKK
AKKTKKSKLRYNTEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGV
KKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPH
KCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCS
LCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHC
DTVIARKSDLGVHLRKQHSYIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDY
ACRQERHMVMHKRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTSFVCTKCGK
TFTRRNTMARHAENCNGIDSGEGENGTPTKRGRGGRKRKMRSRKDDDEDSDEHGEPDLDD
IDEDDDEEFLDDDQMDVEQAPPSIPIPAPAEPPVKRKRGRPPKNAPKASPTKSVAKTTTA
AAAIIQVEDESTGAIENIIVKKEPEGADAAAQPVVEEVEAVEAGVETVQLTVPEAAPNGD
LTPEMILSMMDR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaagcattcatttttgatacaggtattacccatggaagggggaccgactgagaccgtg
gtggaagatgcagtggatgctttcaaggccaaggaagggaagacataccaaaggcgacga
gaagatgaggaagtgggagctgaattgcttcaggctgctgggttagagcaagcccatgtt
gaaggcgagcctgtggtggaggctgtcaacagcagtgtggagatgatggtgatagactcc
ctggaccctgccctcctccagatgaagactgaagtcatggaggctgctgtcggtgcacct
gttggtgttgctggtgccgcccatgaagccacggtcaccactgtcgatgacactcagatc
atcaccctccaggtggtgaacatggaggagcagcagttgggcttgggagagctgcagctg
gtgcaggtgcctgtttcagctgtgcccgtcactgccgccactgtagaagagctgcagggg
acgctggtggatgccatgcctaaagatggggagccggtcatctgtcacaccctgccatta
cctgagggcttccaggtggtcaaggtgggtgcaaatggagaagtggaaactgtggagcaa
gatgagctccaggcccaagatgatcaggctccgcagcaggaggaggaggatatggttgaa
gcccaaaatgaagaccccgcctggtccaaagatccagactacacaccccctgtcaaaaag
gccaaaaagaccaagaaaagcaagctgcgttacaacacagagggcgataaagacatggat
gtgtccgtgtatgactttgaggaggagcagcaggagggacttctctctgaagtcaatgct
gagaaagttgtgggtaacatgaaaccgcccaaaccaaccaaaatcaagaagaaaggtgtt
aagaagacattccagtgtgagctgtgcagttacacttgcccacgtcgttccaatctggac
cgccacatgaagagccacacggatgagaggcctcataagtgccatctttgtggacgagct
ttcaggactgtgactttgctgaggaaccacctcaacacacacacaggcacaagaccacat
aagtgcactgactgtgacatggcatttgtcaccagtggagagctggtacgacaccgacgc
tacaagcacactcatgagaaaccattcaagtgctccatgtgtgactatgccagtgtagag
gtcagcaagctgaagcgccacattcgctcccacactggagagcgtccgttccagtgcagt
ctgtgcagttatgctagcagagatacctataaactgaagagacacatgaggacccactca
ggagagaagccctatgagtgctatatctgtcatgcacgttttacccagagtggtaccatg
aagatgcacatactgcagaagcacacagaaaatgtggcgaaatttcactgcccccactgc
gacaccgttattgcccgcaagagtgatcttggtgtgcatctccgtaagcagcattcctac
attgaacaaggcaggaagtgccgctactgtgatgcagtgtttcatgagcgctatgctctc
atccagcatcagaagtcccacaaaaatgagaaacgcttcaaatgtgatcagtgtgactat
gcatgccgtcaggagcgtcacatggtcatgcacaagcgcacccatactggagagaagcca
tatgcctgcagccaatgtgagaaaactttcagacagaaacagctgctggacatgcacttt
cggcgctatcacgaccccaactttgtacccacatcctttgtatgcaccaagtgtggcaag
accttcactcgcaggaataccatggccagacatgcagagaactgcaatggtatcgattcc
ggcgaaggagagaatggaactccaaccaaaaggggccgtggaggccgaaagaggaagatg
cgctctagaaaggatgatgatgaagatagtgatgaacatggagaacctgacctggatgac
attgatgaagatgatgatgaggagtttcttgatgatgaccagatggatgtggaacaggct
ccacccagcattcccatcccagcaccagccgaacctcccgtcaagaggaaacgcggcaga
cctcctaagaatgcacccaaggcttctcctaccaagtctgtcgccaaaaccaccacagca
gctgctgccattatccaggtggaagatgaaagcacaggggccattgagaacatcatcgtg
aagaaagagcctgagggtgctgatgcagctgcccagccagtggtggaggaagtggaggct
gttgaggctggtgtagaaacagtgcagctaacagtccctgaagctgcacctaacggtgat
cttactcctgaaatgatccttagcatgatggaccggtga
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