Carassius auratus (goldfish): 113118577 Help Entry 113118577         CDS       T07313                                  Name (RefSeq) dmX-like protein 2 isoform X1   KO K24155   rabconnectin-3a Organism caua  Carassius auratus (goldfish) Pathway caua04142   Lysosome Brite KEGG Orthology (KO) [BR:caua00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     113118577  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:caua04131]     113118577 Membrane trafficking [BR:caua04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     113118577  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     113118577    RAVE complex     113118577 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 Beta-prop_IFT140_1st EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_LRRK2 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_Vps41 VPS11_N WDR90_beta-prop_4th Beta-prop_VPS8 NBCH_WD40 Motif Other DBs NCBI-GeneID:  113118577 NCBI-ProteinID:  XP_026143637 Ensembl:  ENSCARG00000012909 UniProt:  A0A6P6RDV3 LinkDB All DBs Position 18:complement(17986519..18052201) Genome browser AA seq 3061 aa AA seqDB search MHLHQVLTGAVNPGDCCYSVGSVHDVPFTAYGSGCDIVILASDFECVQIIPGAQNGNIQV GCVECSQQLGRIAASYGNTVCIFEPIASNPNKRHKQLNYQWQKTGQFFLNAITYNLAWDP QGNRILAATERLQLWAPPTSDTLIEEEDGQLNEDRAHELMLNDWKCVWQCKTAAAVRITQ WSPDGEYFATAGKDDCLLKVWYPTTGWKSAVVMPDMADKKIPEIHFSFVYLAHPRTVTGF SWRKTSKYMPKGSVCNVLLTSCADGICRLWSETLLPEDSLLGGQISENSSSFSSSLPNNA QKDKIQHALESIHHLKHLRRGRRRSSALVAHTELLPSQLGSHETHRHISHYANALCHFHI SASINPNTDIPAALTGSGLFSEDVSGGFVVHWLNNKDLSFTTSMDRFMQQLRKLSEQHLE QATEDFEQEGAVKFDFDLDEMSDKGSSEHEEGDQEGSTKASSPGSSSSAPPPSVLLDRKL ETLILEWNKSPDMLFTIHPHDGSFLVWHIKYLDEFIPGIFRQVQVSFSSRIPVAFPTGDA NSLSKNIMMYACTFMDQDNFSALDDKRSERRVPQSASASAGLSALGHSLAAVIGPAVMMV SKHVDGSLNQWAVTFAEKSAFSNVLTVSHKFRYCGHRFHLNDLACHTVLPLLLTSSHHNA VLTPPSGSGNVDGDQIGGVALQPTRPLRGIPRKQLRNAATRTFHDPNAIYSELILWRVDH IGPLSCTGGVSELARINSLHTSAFSNVAWLPTLIPSSVLGTYCNSASACFVASDGKNLRL YQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDAITNQCGSNTQLLHV FQEDFILGYKPHEDFPDFNITSVPSGGEYQPPPFSEKFYLVVIEKDANQNSVLQMWHLHL RSVQAYVEEPINDHVFQNKLTVPLSQNYGDSSPDITPGQSPLPRSSSSANLQSASKLILS SKLVYSQQLDLPPGVELIRATPSAGHLSSSSIYPVCLAPYLIVTTCSDGRVRFWHCRVDM DLSAPHPEETRLYRWEYWRLLKEEEDNDSSVSVAGRPIAVSCSYTGRLAVSFKQKSPENE GGMLQDFSMLVSIYECESTGGSEWVLEQTIHLDDFSKPVKTLDPRVSVDSNLVVYSKLDL FVTKDSPNIKHFVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVTEQTGVKDGMAVTLP LGGSIKQGIRSRWVLLRSVNLVSSVDGTPSLPVSLSWVRDGILVVGMDCEMHVYAQWRQD EKLCDYDDNSILSPEGVAGRTMYASNEGRARSRSVFEGSAGIDDAVRPPAVIQDGGLFEA AHSLSPTLPQYHPTQLLELMDLGRVRRAKAILAHLVKCIAGEVAVVRDVEAGEGGARRHL SRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYALLSADQDTSYKMGDEAGKAGKG AERETQKQSEDQYADLFQVPAVTTDDFVNFAAEKPEKKSRVINLSQYGPTYFGPEHAQVL SSHLMHSSLPGLTPLEQMFLVALADTVATTSAEVAGPTDKQYAGGEALDECGLRYLLAMR LHTCLLTSLPPLYRMQLLHQGVSTCHFAWAFHSEAEEEMLNMIPAMQRGDPQWSELRAVG VGWWIRNINTLRRIVEKVAKAAFQRHNDPLDAALFYLAMKKKAVLWGLFRSQHDEKMTQF FSHNFTEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMEDIQLAMIV ARLYEADYESSSTCQGILYEKVLGCNRDGSGFSCTKLHPDPFLRSIAYWIMKDYTRALDT LLEQIYKEDDENPDVLVKSCNPVVFSFYNYLRAHPLIIRRHFAKPEASAVVVGLTSERNS ADEINLIERKLFFTTANAHFKVGCPLLALEVLSKIPKVTKKASSLSKGSSMANVTGAQPQ ENGGKASDLNWGAPALSSQSLGADSSTRLDWSQPMVKIEDEGLQLDWGDDKEEEEDEEGG LTMRKPEVEDEEAKKPSKSAALRHEDSTGESEVDVIAEQLKFRACLKILMTELRTLATGY EVDGGKLRFQLYNWLEKEIEATHHICNYKFEGKVAAGQLEKWGEDGSLDLEDLQFQGEVG AYERHQMERRRLQAKQLHAERRKAWLRDNQALLRVFLSYCSLHGAKGGGVTSVRMELLFL LQESQQEMTVKQLQSPLPLPTTLPLLSASIAPTKTVIANPVMHLRNHIHDILYTIVQMEA PPHPDILDDRVNALHTLAASLSACIYQSLCDSHSYSSQSEANQFMGMVYQGLLLSDRRRL RTESIEEHATPTSAPAQWPGVSSLISLLACAQGDDHISLKVMLCEAVVAVYLSLLIHGLG THSGNELFRLAAHPLNNRMWAAVFGGGAKLIVKPKRPSEITPANLESYRQTALQSENTPA LPPPTPPAEDVDRQRRRFNMRMLVPGRPVKETPATPPPIPVERPTYKEKFIPPELSMWDY FVAKPFLPLSDSGAMYDSDESGGSDNEDDDDAFLSDTQMTEHSEPNSYSWSLIRLVMVKL ALHNVKTFLPLTGLDFTELPVTSPLANAVLKTLENWEQILLEKMNKFDGPPPNYINAYPT NLSAGGGPAILRHKAMLEPDNTPFKSKHRFSFPARRLWHFLVKQEMLQETLIRYIFTKKR KQSESLDDHVDRLIQNCVTGARKNNKVEADMGYPGGKAKIIHKESDIIMAFAINKANTNE IVLASTHDVQEVDVSTLLAAQPYTWIGEDFDKESRSSDDVDYRSSHTNIAQASAGPFAPQ QMAASSSMPWLGSGQTNMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRP QQLICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHSKSC GDFTFITSSSLIASAGQSHDGRNVCLWDTLVSPSNSMIHAFQCHENGATVLQYAPKQQLI ITGGRKGFVCIFDIRQRQLLHTFQAHDSAIKALAMDSAEDFLVTGSAEGNMKVWKLAGHG LMHSFSAEHAKQSIFRNIGAGVMQIETCSGNRIFTCGADGTLKMRVLPDRYNIPASIFQI L NT seq 9186 nt NT seq  +upstreamnt  +downstreamnt atgcatctacaccaggtgttgacgggggccgttaacccaggggactgctgctattccgtg ggaagcgtacatgacgtcccgttcacggcctatggctcaggctgtgatatcgtgatcctt gcaagcgattttgagtgtgttcaaattattcctggagctcagaatggaaacatccaggtg gggtgtgtggagtgctctcagcagcttggccggattgctgcatcctatggaaataccgtt tgtatttttgaaccaatagcttccaacccaaacaaacgtcacaagcaactgaattaccag tggcagaagactggtcagttctttctcaatgctataacctacaatctggcctgggaccca caaggcaatcgtatcttggcggcgactgagcgtttgcagctgtgggctcctccaaccagt gacacgctgatagaggaagaggacggtcagctgaatgaagatcgagctcatgagctgatg ctcaacgactggaaatgtgtctggcagtgcaagactgctgctgctgttcgtattactcag tggtctccagatggagaatatttcgccacagctggaaaggatgactgcctgctgaaggtg tggtatcccaccacaggatggaagtctgcagtggtgatgccggacatggctgataaaaaa attccagagattcatttctcatttgtgtatctggcacatccacgtacagtcacaggcttc tcctggaggaaaaccagtaaatatatgcccaagggctctgtgtgtaatgtgttgctgaca tcctgcgcggatggcatctgtcgtctgtggagtgagaccctcttgcctgaggacagtctg ctgggggggcagatctcagagaatagcagcagcttcagctcctctctgccaaacaacgct cagaaagacaagatacagcacgctctggagtctatccaccacctcaagcacctgcgtaga ggccgcaggagatcgtccgccctggtggcccacaccgagctgctgcccagccagctgggg tctcacgaaactcaccgccacatctcacattacgccaacgccctctgccacttccacatc tctgccagcatcaatcccaacacagatatccccgcggcgctgactggatcaggcctgttc tctgaggacgtcagcggagggtttgtggttcactggctgaataataaagatctgagcttc accacctccatggaccggttcatgcagcagctgcgcaaactttctgagcaacacctggag caagccactgaagactttgagcaggagggggcagtcaagtttgacttcgatctggatgag atgtctgataagggctcttcagagcatgaggagggcgatcaggagggcagtaccaaggcc tcttctcctggttcgagcagcagtgctcctccaccctctgttttgctggatcggaaactg gagactctcatcctggagtggaacaaaagtccagacatgctcttcactattcacccacac gatggatccttcctcgtttggcacatcaaatacctggatgagtttatacctggcatcttt agacaggttcaggtgtcgttctcctctcgtatccctgtagcattccctacaggcgatgct aactccctcagtaagaacatcatgatgtacgcttgtacgtttatggaccaagacaacttc agtgcgctggatgataagagaagtgagcggcgggttcctcagagtgcatctgcgtccgcc gggcttagtgctcttggacattctcttgctgctgtcatcggccctgccgtcatgatggtg tccaaacatgtggacggctcgctcaaccaatgggctgtgacctttgctgagaagtctgcc ttttcgaacgtcctcacagtctcgcacaagttccgttactgtggacaccgtttccatctg aatgatttggcttgtcacacggtacttcccttgctgctaacatcatctcatcacaatgca gtgttgactccgccctctggatctggaaacgttgacggagatcagattgggggtgtggct ctacaacccaccaggccattgagaggcattccccgtaaacaactgcgaaatgcagccacg cgtacattccatgaccctaatgcgatctacagtgagctgatcctctggagagtcgatcac attggcccactctcctgcacagggggcgtgtcagagctagcacgaatcaactctctacac acatctgcattctccaacgtggcctggctgccaacactcatccctagctcagtgcttgga acgtactgtaactcagcaagtgcgtgctttgtggcatctgatggtaaaaacctgcgtctg tatcaagctgtggtagatgcccgcaaactgctggatgaactctctgacccagagacctct aaactggtgggtgaagtattcaacattgtgagtcagcagtccactgcccggcccggctgc atcatagagctggatgccattactaaccagtgtggctcaaacacacagctgcttcacgta ttccaggaggattttattttaggttacaaaccacatgaagactttccagatttcaacatt accagtgttccctctgggggagagtaccagccccctcctttctcagaaaagttctacctg gtggtgatcgagaaggatgcaaatcagaactcagtgttacagatgtggcatcttcatctg cgctccgtgcaggcgtatgtggaagagccaataaatgaccacgtgttccagaacaagctg acggttcctttgagtcagaactatggtgactcatctcctgacatcactccaggtcaaagt ccgctgccccgctcctcctcttctgccaacctgcagtcagccagcaaactcatcctgagc tctaaactggtctacagtcagcagttagaccttccaccaggggtggagctaatcagagcc acgccctctgctggtcacttgagctcctcatctatctaccctgtgtgtctggctccatac ttgattgtgaccacctgttcagacggacgcgtcaggttctggcactgtagggtggacatg gacttatcagcaccacaccccgaagagacacgtttatatcggtgggagtactggagactc ttgaaagaggaagaggacaacgacagctctgtgagtgttgctggtcgacccattgcggtc agctgctcctacactggaagacttgctgtgtcgttcaaacagaaatcgcctgaaaatgaa ggtggcatgcttcaggacttctccatgcttgtatcgatatacgagtgtgagtcgacgggt ggctcagagtgggtcctggaacagactattcacctagacgattttagcaaacccgtgaag acgctggatccgcgtgttagtgttgatagcaatttggttgtctatagcaagttagatttg tttgtaaccaaagacagccccaatatcaaacactttgtgcacctagactggctgtctaaa gaagatgggtcacacatcctgacggttggggttggatccaacatccttatgtatggacgc atctcaggggttgtcacagagcagacaggagtgaaggatggcatggcagtcaccctgcct ctagggggcagtataaagcagggaattcgctctcgttgggtgctgctgagatccgtaaac cttgtttcttctgtagacggtaccccgtccctgccagtgtccctatcctgggtgcgtgat ggcatcctggtggtgggcatggattgtgagatgcatgtttatgcgcagtggaggcaagat gaaaaactgtgtgactatgatgacaacagcatcttatccccagaaggcgttgcaggtcgc actatgtatgcttcaaatgaaggcagagcacgatctaggagcgtcttcgaggggagtgcg ggaattgatgatgcggtccgccccccagcagtgattcaagatggcggtttatttgaggcg gcccattcattgtcacccactcttccacagtaccatccaacacagcttctagagcttatg gaccttggaagggtccgtcgtgccaaggccattttggcgcacctggtcaagtgcattgct ggagaagttgcagtggtgagggatgtagaagcaggtgagggtggcgccaggaggcaccta tcccgaaccatcagcgtgacgggtagcacggcaaaagacactattgttgctggccgagat ggtgggcgagattacacagaaatcaattccatacctccacttccactatacgcactgctg tctgcggaccaggacacctcttacaagatgggagatgaagcgggaaaagctggaaaaggg gcagaacgtgagacacagaaacaatcagaggatcagtacgctgatctgtttcaggtgccg gctgtcacaaccgacgattttgtgaactttgctgctgagaaaccagagaagaagtctcgt gtaattaacctatcacagtacggccccacgtactttggccctgaacacgcacaggtgctg tcttcacatcttatgcactccagccttccaggtctcacaccccttgagcagatgttcctt gtggctcttgccgatactgtggcgaccactagtgcagaagtagcaggacccacagataaa cagtacgctggtggagaggctctagatgagtgtggtctacgttacctgctggccatgagg ttacatacctgtctgctgacatccctgcctccactatacaggatgcagctacttcatcag ggtgtctccacatgtcactttgcatgggcattccattcagaggctgaggaggagatgctg aacatgattcctgccatgcagagaggagatccgcagtggtctgagctcagggcggtgggt gttggctggtggatcagaaacattaacacactgaggcggatcgtggaaaaggttgccaaa gcagcatttcagaggcataatgatccactggatgcggctctcttctatctggccatgaag aagaaggctgttctctggggtctctttaggtctcaacatgatgagaagatgacccagttt ttcagccataacttcacggaggaccgctggagaaaggcggctttaaagaacgccttctct ctcctgggcaaacagcgctttgagcagtcggctgcatttttcctgctcgctggctccctg aaagacgccattgaggtttgtctggagaaaatggaggacatccagcttgcgatgattgtc gctcgtctttacgaggctgattacgagagttcctccacctgccagggtatcctgtacgag aaggttctcggctgcaacagagatggaagcgggttctcctgtaccaaactgcaccctgac ccgttcctaaggagcattgcatactggatcatgaaggactacacaagagccctggacacc ttgctggagcagatttacaaagaggatgatgagaaccctgatgttctggtgaaatcgtgt aatcctgttgtctttagtttctataactacttgcgtgcacaccctctgattattcgacga cattttgccaagccagaagcatctgcggttgtagttggtctaacatcagaacgcaacagt gcagatgaaataaaccttatagagcggaaactcttcttcaccactgctaacgctcacttt aaagtaggctgcccactcctggctcttgaggtcttgtccaaaatccctaaagtcactaag aaagcgtcttctctgagtaagggctcttctatggccaacgtcactggtgcccagccacag gagaatggaggaaaggcttcagatctcaactggggagctcctgccctctccagtcagtcc ttgggagcagactcctccaccagactagactggagtcaaccgatggttaaaattgaagat gagggtctacagttggactggggtgacgataaggaagaagaagaggatgaagagggtggg ctgaccatgaggaaaccagaggtggaggatgaggaggctaaaaagccatccaaatcagca gccctacggcatgaagactcaacgggcgagtctgaagtggacgtgatcgccgaacagctg aagttccgagcctgtttgaagatcctcatgacggagctgcggacgctggcaacaggatat gaggtggatggtggcaagctacgatttcagctctacaactggctggagaaagaaatcgag gccacgcaccacatctgcaactataagtttgaaggaaaagtagcggcaggtcagctggag aagtggggtgaagatggttctctggacctggaagacttacaattccagggtgaagtaggt gcgtacgaacgtcatcagatggagcgacggcgcctgcaggccaagcagctgcatgcagag aggaggaaagcctggctgagagataatcaggctctgctcagagtcttcctcagttactgc agtctacacggagccaagggtggaggagtgacgtctgtcaggatggagcttctcttcctg ctgcaggaatctcagcaagaaatgacagtgaagcagcttcagtcaccactccccctcccc accactctgcccctgctgtcagccagcatcgctcccaccaagacggtcatcgccaacccc gtcatgcatctcagaaaccacatacatgatatcctctacaccattgtccagatggaggct ccaccacacccagacatactggacgaccgggtgaatgctttacacacactcgctgcttct ctatcggcctgtatctaccagtcgctgtgtgacagccacagctacagcagtcaatcggag gccaatcagttcatggggatggtgtatcaggggctgttactgagcgacaggcgtagactt cgcactgaaagcatcgaggaacatgcaacacccacctctgcccctgcacagtggccaggt gtgtcgtctctgatcagtctgctggcgtgtgctcagggtgatgatcacattagtttgaag gtcatgttgtgtgaggcagtagtggctgtttatctcagtctgctgattcacggtcttggc acacactctgggaacgagctcttccggctggccgctcatcccctcaacaaccgcatgtgg gccgctgtgtttgggggaggagccaaacttattgtcaaacccaagcgtccatctgaaatc actccagccaatttggagtcatacagacagacagcgctccagtctgagaatacaccagca ttacctcccccaacccctcccgctgaggatgtggaccgacagcgacgcaggtttaacatg cgcatgcttgttcctggacgtcccgttaaagagactcctgccacacctcctcccatccct gtagaacggcccacctataaggagaaattcattccacctgagctcagcatgtgggattac tttgtggccaaacctttccttcctctctctgacagcggggcaatgtatgattcagatgag agcggtggtagtgacaatgaggatgatgatgatgccttcctctcagacacacagatgact gaacactctgagccaaactcctacagttggtctctgatccgtctagtgatggtcaaactt gccctgcacaatgtcaagacattcctgcccctgacaggactggacttcacagagttgcca gtgacgtctcccctggccaatgctgtgctgaagacactggaaaactgggaacagattctc ttggaaaaaatgaacaaatttgatggccctccaccaaactacatcaacgcctaccccaca aacctgagtgcagggggaggaccagctatactccgacacaaagccatgctagagccagat aacacaccgttcaagtcaaagcaccgcttctccttccctgctcgccgtctatggcatttt ctggtcaaacaggagatgctccaggagactttgattcgttacatcttcacaaagaaaagg aagcagagtgagtctttagatgatcatgtggaccgcctcatacaaaactgcgttactgga gctcgaaaaaacaacaaggtggaggctgatatgggttacccgggaggcaaagcgaaaatc atccataaagaatccgacatcatcatggcgtttgccattaacaaggctaacactaatgaa atagtgctggcgtccactcatgatgtccaggaagtggacgtgtccacgttgctcgcagct cagccttacacctggatcggagaggactttgacaaggagtctcgcagttctgatgatgtg gattaccgctcgtcgcacaccaacatcgcccaggccagtgctggtccctttgccccccaa caaatggcagcatcgtcctccatgccatggctgggcagcggacagaccaacatgggtgcc agtgtgatcatgaagaggaatctgaataacgtgaagagaatgacatctcatcccatctat cagtactacatgacgggagctcaggacggcagtgtgaggatgtttgagtggaatcgtcca cagcagctcatctgtttcagacaggctggaaacgctcgagtcacacgcctctatttcaac tcacagggcaacaagtgtggtgttgcagatggcgagggctttttgagcctctggcaagtc aatcagacctcctcaaaccccaaaccgtatttgagctggcagtgtcacagtaaaagctgc ggtgatttcaccttcattacatcctccagtctgatcgcctcagcaggacagtcccatgat ggcaggaatgtttgtttatgggacactctggtctctccaagtaactcaatgatacacgca ttccagtgccatgagaatggtgcaacggttcttcagtatgctcctaaacagcagctaatc atcacgggcggccggaagggattcgtctgtatttttgacatccgtcagagacagctgctc cacacattccaggcacatgattcggccatcaaagcgctggccatggattcagctgaagac ttcttggtcaccggctcagctgaagggaacatgaaggtctggaagttggcgggtcacggt ctcatgcactcctttagtgcagagcatgctaaacaatccatattccgaaacatcggcgct ggcgtgatgcaaatcgaaacctgctcaggcaaccggatcttcacctgtggagccgacggg accctgaaaatgagggtccttccagaccgttacaacattccagccagtatattccagatc ctctaa

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