Carassius auratus (goldfish): 113118600
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Entry
113118600 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113118600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113118600
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113118600
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
HECT type E3
113118600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
Motif
Other DBs
NCBI-GeneID:
113118600
NCBI-ProteinID:
XP_026143682
Ensembl:
ENSCARG00000017830
UniProt:
A0A6P6RD65
LinkDB
All DBs
Position
18:18756432..18847794
Genome browser
AA seq
2096 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPIDHTLAGRLQPEQVNQKANSPPENRRSNSKASKAP
PSSAVSSARGHASRRNSLSLSVGSHSIPDPELEAAGSSGQQGRREGSSTRALKRSSASEP
NITFSPSPAKRPKSVSSHLLESLSSGPSAPTTSPEVTEPRKAPASVSTKSKKRRLAAEPA
PSRALNKKSTSYPGPSGASSTPSQKRKKADASLLSSSSSSSLPSSSSAAGPLPPRSEASR
AAKPTKLASKSAASAKAGCSTVTDSSSSSASSSSSSSSSSSAATGINSCAPQGARLKQGK
DQSKARRSRSASSPSPRRSSRDKEQSKAAGSSKFDWTSRFNSKVNLPKPKLSLPGSAKAE
TSSKPGPSGLQAKLASLRKSTKKRSESPPAELPSCRRSTRQKTTGSCASTSRRGSGLGKR
GAAESRRQDKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEM
GRLQALLEARGLPPHLFGPFGPRMSQLFHRTIGSGANSKAQQLLQGLQATGDESQQLQAA
IEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAV
VVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQ
RNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEEN
LLQQVASRDLLTNIQQLLVLTPPVLSSGMFIMVVRMFSLMCSNCPCLAVQLMKQNIAETL
RFLLCGASSGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAQTT
EGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTG
TARAIQRKPNPLANPGTGGHLEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAG
PAVRHKCLRAILRIIFFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQ
KLPDVFSVYFRREGVMHQVKNLSESEVFLTSPPKACTSGTASLCTTTITTATTTAASNIT
PDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPT
TTQSPKSSFLASLNPKTWGKLGTQTNSSNSEPSRTAGVSGLARVPPKDSVSNNRDKIKAW
IKEQASKFVERYFNSESVDGSNPALNVLQRLCTATEQLNLQIDSGVECLEEISSIVSESD
VSSFEIQHSGLVKQLLLYLTSNSERDTISRDERIKRFLHVFFCCPIPGQEPLGRLDPTEN
GPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCT
NVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNS
GSVRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRAGIWTKTHTIW
YKPVREDEEGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVTNPLESYLISD
PPEGITFDDPSMEVVLLLRVLHSISRYWFYLYDNAAYKEIIPTGEFINSKLTAKANRQLQ
DPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDS
QDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYAL
VSQELQRADLGLWRGEEVTLSNPKAGRQEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMK
FRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHESSVSSHDLVNIDPGVAKSIQHLEDII
RQKKRIEQDRSHTRETLQQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIH
NLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLQHLQYFYPEELDQLLCGSKSESWDV
KTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPL
TIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccaatagaccatacacttgcaggaaggttgcagccagagcaagttaac
caaaaagcaaattccccacctgaaaatagaagatctaattctaaggcttccaaagcccca
cccagctctgctgtcagctccgcccgtggccacgcctctcgaaggaacagcctctctcta
tctgtgggttcacactcgattccagatccagagttggaagcagcagggtcttctggccag
caggggagacgggagggcagcagcacacgtgctctcaaacgcagctccgcttcagagccc
aacatcaccttttcgcccagcccggccaaacggcccaaatcagtgtccagccaccttttg
gagagtttatccagtgggccatcagcccccacaacctcacctgaagttacagagccgagg
aaggctccagcttctgtcagcaccaagtccaaaaagagacggttagcagccgagccggct
ccctccagggccctgaacaagaagagtacgtcctaccctggccccagtggggcctcaagc
accccctctcaaaagcgcaagaaggcagacgcctctttgttgtcatcctcctcttcttcc
tccctccccagctcgagcagcgcggcaggccccctgccaccccgcagcgaggccagccgg
gcagccaaacccaccaagctggcgtctaaatcggccgcctcagccaaagctgggtgtagc
accgtaactgactcctcctcgtcctctgcctcttcctcatcctcctcttcctcttcctcc
tcggccgccacaggcatcaacagctgtgcccctcagggtgcccggctaaaacagggcaag
gaccagagcaaagcacgacggtcacgctctgcatcctccccttctccccgaaggagcagc
cgagataaagagcagagcaaggctgctggctcctccaagtttgactggacatcccgcttc
aactccaaagtcaacctgccaaagcccaaactgtccctgccgggatcggccaaggctgag
acctcctccaaacctgggccctccggactgcaggccaaactagcaagtttgaggaagtcc
actaagaagcgtagtgagtctcccccagcagagctccccagctgtcggaggagcacacgt
cagaagaccacgggctcttgtgccagcaccagtcggcgaggctcaggcctgggcaagcgc
ggagcagccgaatctcgccgacaggataaaatggccgactccgacaacaaccaggatggg
gccaattcatccgccgcacgcacagaggagacaccacaaggggcgtcagcgtctagctca
gtggctggagcggttggtatgaccacctctggagagagtgaatcagatgactctgaaatg
ggaagattgcaagctcttctggaggccaggggccttcctcctcacctgtttggcccattt
gggccccgtatgtctcagctgtttcataggactatcgggagtggagctaactcaaaggca
caacagctgctgcaggggcttcaggctacaggagacgaatcccagcagctccaggccgct
atagagatgtgccagctgctagtgatgggtaatgaagagacgctgggaggattccctgtc
aagagcgttgtacctgccctgatcacactgttacagatggagcataattttgatattatg
aatcatgcgtctcgcgccctcacctacatgatggaggctctgccgcgctcctcggctgtg
gtggtagacgccatccctgtcttcctggaaaagctgcaggtaatccagtttatcgatgtg
gcagagcaagctttgactgccctggagatgttgtcacggaggcacagcaaagccatctta
caggctggaggtctggctgactgtttgctgtacttggagttcttcagcatcaatgctcag
aggaacgcattagccatcgctgctaactgctgccagagcatcacaccggatgagtttcac
ttcgtcgctgactctctgcccctgctcacccagagactcacacatcaggataaaaaatct
gttgaaagcacttgtctctgttttgccaggctggtggacaactttcagcacgaggagaac
ctgttacagcaggtggcgtcacgggacctgctgaccaacatccagcagctgctggtgctc
actccacccgtgctcagctccggcatgttcatcatggtagtgcgcatgttctctctcatg
tgctccaactgcccatgcctggctgtgcagctcatgaaacagaatatagcagagaccctg
cgtttcctgctctgtggtgcatccagtggaagctgtcaagagcagattgacctcgttccc
agaagcccccaggagctttatgaactcacctcactcatctgtgagctgatgccatgtctg
cctagagagggcatctttgcggttgacgccatgctgaagaaaggcagtgctcagaccaca
gagggcgccatctggcagtggagagatgaccgaggcctgtggcacccgtataaccgcatc
gacagccgcatcattgaaactgcacaccagaacggggaagacgagataagtctgtcgaca
ctcggccgtgtctacaccattgacttcaactctatgcagcagataaacgaagatactggc
actgcccgagccattcagagaaaacccaaccctctggccaaccccggcacaggagggcac
ttggaggtgcggcgagaggacgcacgtgctcagctgatgaaagaggaccctgagctggcc
aagtgcttcataaagactctgtttggggttctgtatgaggtgtacagctcctcagctggg
cctgcagtcagacacaagtgccttagagccatcctccggatcatcttcttcgcagatgca
gagctgctaaaagacgtactgcgcaaccatgctgtgtctagccacatagcttccatgctg
tccagtcaggacctgaagattgtagtgggctctctacagatggcggagatcctcatgcag
aagcttccagatgtgttcagtgtttatttcaggcgggaaggtgttatgcaccaggtaaag
aacctctctgaatccgaggtgttcctcaccagccctccgaaagcgtgcaccagtggcaca
gctagtctttgcaccaccaccatcacaacagcaaccactacagctgcttctaacatcacg
ccagacttaggctcgcccagtttccagcacagcatggatgactcgctggatctcagtccg
cagggtaggttgagtgatgttctgaaaagaaaacgccttcctaaaagaggaccaaggcgt
cctaagtactccccacccagagacgatgacaaagtggataatcaggctaagagtcctaca
accacacagtcccccaagtcctctttcctggccagtttaaatcccaaaacctggggtaag
ctggggactcagactaacagctccaactcagagccctcacgcactgcaggggtcagtggt
ctggcacgagtgccacccaaggactcggtttcaaacaacagggataagataaaggcttgg
ataaaagaacaagccagcaagtttgtggagcgttactttaattctgagagcgtggatgga
agcaaccctgcactgaatgtcctgcaaagactctgtactgccacagaacagctgaacttg
cagattgacagcggtgtagagtgtctagaggagattagcagtattgtatctgaatcggac
gtgtcctcttttgagatccagcacagtgggcttgtgaagcagctgttgttgtatctaaca
tcaaacagtgaacgggacacgatcagtagagatgagagaatcaagaggttcctgcatgtg
ttcttctgctgcccgataccagggcaggaacctctgggacgtttggacccaacagagaat
ggcccactactggcattggtgcacaagatgaacaactgccttagtcagatggaacagttt
cctgttaaagtgcatgattttcccagtgggaacggcaacggaagcaggggttcacaagcc
cttaagttcttcaacacacatcagctgaagtgccagctgcaaagacacccagactgcacc
aatgtaaaacagtggaagggtgggccagtcaaaattgaccccttggccctggtacaagct
attgagagataccttgtggttagagggtatggaaggatcagggaggaggatgaagacagt
gatgatgatggttctgatgatgagattgatgaatctttggctgcccagttcttgaattct
gggagtgtacgtcacaggctgcagttctacataggagagcacctgctgccgtacaacatg
acggtttatcaggctgtcaggcagttcagcttgcaggctgaggaggagcgagagagcaca
gatgatgaagcaaatcctctgggacgggctggcatctggaccaaaacacacactatatgg
tataaaccagtcagagaggatgaagagggctgtaaagatgctgtcggagggaagaggggt
cgcgcacagacagctcccactaaaacctcccctcgaaatgcaaagaaacaggacgaactg
tggcatgagggtgtgtgtcccagtgtgacaaacccattagagtcatacctcattagtgat
cctccagagggcatcacttttgacgatccttcaatggaggtggttctgctgctgagggtc
ctgcactccatcagtagatactggttctacctgtacgataatgctgcatataaagagatc
attcccactggtgagtttattaacagtaaactgacagcaaaggccaacagacagttgcag
gatccactggtcatcatgacagggaacatccccacctggctcaccgagctcggcaagacc
tgtcccttcttcttcccgtttgacacgcgacagatgctcttctatgtgacggcgtttgac
cgcgatcgcgccatgcagcgcctgctcgacaccaacccagagattaaccagtctgactca
caagacagccgtgtcgctccacgccttgacaggaagaagagaacgataaaccgtgatgag
ctccttaagcaagcagagtcagtaatgcaagacctcgggagttccagagccatgctggaa
attcaatatgagaacgaggtgggaacaggcctcggacctacgcaagagttctatgctctg
gtgtctcaggagttgcagagggccgatttgggtctttggagaggagaggaagtcactctc
tccaaccctaaagcagggaggcaggagggtaccaagtatatgttcagttccagagggttg
tttgctgttccatttggacgaactaccaaaccagctcacatcgccaagatcaaaatgaag
ttccgttttcttggaaaactgatggctaaagcgatcatggacttcagattgttggacttg
cctctaggtttgccattctataagtggatgctgaggcacgagtcctccgtcagctctcat
gacctggtcaacattgatcctggtgtcgccaaatccatccagcacctggaggacatcatc
cgccagaagaagagaatagagcaggacagatcacatacacgggagaccctacagcaggcc
ttggagagtctcaacatgaacggctgctcggtggaagatctgggcctggacttcactctg
cctggattcccaaacattgagttgaagaaagggggcaaagacgtgccagtcaccattcac
aacctggaggaatacctcagattggtggtttactggacactcaatgagggcgtctctcgg
cagtttgagtcgtttagggaaggatttgagtctgtctttcctctgcaacacctgcagtac
ttctatcctgaagagctggatcagttgttgtgtggcagcaagtcagagtcctgggatgtg
aagacactaatggagtgctgcagaccggaccacggctacacacatgacagccgtgcagtg
cggttcctgtttgaggtgctgagcagttttgatgcagagcagcagagacttttcctgcag
tttgtcacaggcagccccagacttcctgtcggaggattccggagtttaaaccctcccctc
accatcgttcggaagacgttcgagtcgacggagaacccggacgacttcctcccgtcggtg
atgacgtgtgtgaactacctgaaactgccggattactccagcatcgagatcatgcgcgag
aaactgttgattgctgcgcgcgagggccagcagtctttccatctgtcctga
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integrated database retrieval system
