Carassius auratus (goldfish): 113118791
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Entry
113118791 CDS
T07313
Name
(RefSeq) exosome complex component RRP46-like isoform X1
KO
K12590
exosome complex component RRP46
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113118791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113118791
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113118791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113118791
NCBI-ProteinID:
XP_026143988
Ensembl:
ENSCARG00000006758
UniProt:
A0A6P6RFK8
LinkDB
All DBs
Position
18:complement(11543255..11547164)
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AA seq
217 aa
AA seq
DB search
MSIMMELDRGCSNLREYGNEQSLLSKPDGSSTFVQGDTSILAGVYGPAEVKVSKEIYDRA
TVEVLIQPKMGLPGVRERAREQCARETCEAALLLTLHPRSSVTVILQFGSLSNCQLPSCC
LNATCMALMDAGLPMSHLFCSVTCAISKDGQIITDPTALQEKESRALLTFAIDSVEHNVL
MSSTKGSFSLQELQRCIAISQRASEQIFQFYRESVKR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcatgatggagttagatcgaggttgttcaaatttaagagaatatggaaatgag
cagagtttgttatccaaacctgacgggtcttccacatttgttcaaggtgatactagtatc
ctggcaggagtttatggaccagctgaagtgaaagtcagcaaggaaatatatgatcgagct
actgtagaggttcttatccagccaaaaatggggcttccaggagtccgtgagcgcgcgaga
gagcagtgcgcgcgcgagacgtgcgaggctgcgcttctgttgacgcttcatcctcgctcc
tctgtcacagtcatcctgcagtttgggtccttatctaactgtcagctgccgtcatgctgc
ctaaatgccacctgtatggctctaatggatgccgggcttcccatgagccaccttttttgt
agtgtgacctgtgcaattagcaaagatggccagataatcactgatcctacagctctgcag
gaaaaggaaagtcgagcgttgttaacatttgctattgatagcgttgagcataatgttttg
atgtcatcaaccaaaggctctttttcactccaggagctgcagcggtgcatcgcaatcagt
caaagggcttctgaacaaattttccagttttatagggaatctgtcaaacggtga
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