Carassius auratus (goldfish): 113119169
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Entry
113119169 CDS
T07313
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113119169
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113119169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113119169
Spliceosome [BR:
caua03041
]
Common components
Common spliceosomal components
SR proteins
113119169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
113119169
NCBI-ProteinID:
XP_026144210
Ensembl:
ENSCARG00000004017
UniProt:
A0A6P6RGA2
LinkDB
All DBs
Position
19:complement(4195196..4200982)
Genome browser
AA seq
373 aa
AA seq
DB search
MSRVYVGKLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVCDLNGKDL
CGKRVIVEHTIGQRRDGGTRPGRSSRYGRGGGGGGGGGGERFGPPTRTDYRLIVENLSSR
CSWQDLKDYMRQAGEVTYADTNKGRKNEGVIEFRQYSDMKRALEKLDGTEVNGRKIRLIE
DRPGARRRRSYSRSASRSRSRSRRSRRSRSHSRTSSRSRASGSRSRSRSTSKKTKGRSGR
MEESSNGARRGGESARDNSLSPSPPSKKGKRENKRARSYSRSRSRSRSRSKSVNDRDLSR
ESGSKSQEANKGSDDGRATEKAHRSRAHSRSRSQTPPEADLQRKSRSRSKSKSRSHSRSR
SYSRSRSHSRSRS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgagtttacgtgggaaaattgagctatcgcgccagggagaaagatgtagaaagg
ttttttaaaggctatgggaagatcctggaagtagacctgaaaaacgggtatggttttgtg
gagttcgatgacccccgtgatgcagatgacgcggtgtgcgatctgaacggtaaagacctc
tgtgggaagcgagtgatcgtggagcacaccattggacagcggcgtgacggtggcaccaga
cctggaagaagtagtcggtacggtcgtggaggaggaggaggaggaggaggtggaggggaa
aggttcggcccacccactcgcacagattacaggctgattgtggagaatctctccagtcgc
tgcagctggcaggacctgaaggactacatgcgtcaggctggcgaagtgacttacgcagac
actaacaagggccgtaagaacgagggggtcatcgagttcaggcagtactcggacatgaag
agagccctggagaaactggacggcaccgaggtcaatggaaggaagattcggctgatcgag
gaccggcctggggccagacgccgccgctcctactcccgcagcgcctcaaggtctcgctcc
aggagcaggaggtcccgcaggagccgaagccacagccggaccagtagccgctcaagagcc
tcaggctcgcgatcacgcagcaggtcaaccagcaagaagacgaagggcaggagcggtagg
atggaggagagcagtaatggagctcgcaggggaggtgaaagcgccagggataatagcctg
agccctagccccccgagcaaaaagggcaaacgggagaacaagagggctcgctcttattct
agatcccgatccaggtcccgatctcgatccaaatccgtgaacgacagggatttgtccaga
gagtctgggtccaaatctcaggaggcaaacaagggcagtgatgacggccgggcgactgag
aaggcgcaccgctctagagctcattctcgatccagatcacaaaccccaccagaagctgat
ctgcagaggaaatctagatccagatccaaatccaaatctcgctctcattcacgctcccga
tcttattcccgatctcgatcccactcaaggtcacgttcttaa
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