Carassius auratus (goldfish): 113119171
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Entry
113119171 CDS
T07313
Name
(RefSeq) low-density lipoprotein receptor-related protein 12-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113119171
Membrane trafficking [BR:
caua04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113119171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
113119171
NCBI-ProteinID:
XP_026144214
Ensembl:
ENSCARG00000004136
UniProt:
A0A6P6REN4
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Position
19:4292585..4304941
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AA seq
875 aa
AA seq
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MAYTSSLHQICLLWTHLLLIFMGNTVSSQHSENVYVSSMSNACGDVAEQIRASSGVITSP
GWPFEYPSHINCSWNIRANPGEIITISFQDFEIQSSHRCGLDWISIGTYKNLDGYRACGS
TIPAPYISSQDHVWIKFHSDDSTTAKGFRLSYITGKSEEASCKPEQFHCANGKCIPESWK
CNTMDECGDNSDEELCVQPNPSSFFSFQPCAFNQFPCLSRYTRVYTCLPESLKCDGSIDC
QDLGDEIDCDVPTCGEWLRNFYGTFSSPNYPDFYPPGSNCTWLIDTGDHRKVILRFMDFK
LDGTGYGDYVKVYDGLEENPRRLLRVLTAFDSRAPVAVVSSSGQLRIHFYADKINAARGF
NVTYQVEGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDELNCSNCQEDEFPCSRNGA
CYPRSDRCNYQNRCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDAQDDCGDGSDEESC
PVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAELLRREA
PPSYGQLIAQGLIPPVEDFPVCSGNQASVLENLRLAVRSQLGFTSIRLPTTGRHGNIWRR
LFNFTRSRRSGSLALVSADTEEGADGSTSAREPERLGSRRGLLPLDSDDTDTESEQHPRR
DVPGAAGGLMAPLPQKTPPTTAVEAIVSVSASSAPLVSRESSISESISESSGVTGSSCTT
TATTTSSRSPFSSALSRVTRSLRWIRFSLGRSGDGGSSGIGQNHSPLRQLEQGSVGCTGV
GIRGEDEDDVELLIPVSDASSLDSDESSRPLLEQGLEQAFGPHLTPAAVSLRGRLVGRDG
PCEHCGIVHTARIPDACLEATAKTETSDDESLLLC
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcttacacttcgagcttacaccagatttgtttgctgtggacacatctacttctcata
ttcatgggaaacacagtttcatcgcagcacagcgagaacgtgtatgtatcaagcatgtca
aatgcctgtggagatgtagcggagcagataagggcgtccagtggagtgatcaccagccct
ggctggccctttgaatacccttctcacatcaactgcagctggaacatcagggccaaccct
ggagagatcatcaccatcagttttcaggactttgaaattcagagctcacacagatgtggt
ttggactggatctccattggaacctacaagaacctggatgggtaccgggcctgtggctcg
actattcctgccccatacatctcctctcaagatcacgtgtggatcaagttccactctgat
gacagcacgactgcaaaaggcttcaggctttcttacataacagggaaatcggaagaagcc
agctgcaagcctgagcagttccactgcgctaatggaaagtgtatcccagagtcatggaag
tgtaacaccatggatgaatgtggcgataactcagacgaggagctgtgtgtacagcctaat
ccctcctcattcttctccttccagccttgcgccttcaaccagttcccttgtctctcacgc
tacacccgtgtttacacctgtctgccagagtcgctcaaatgcgacggcagcattgactgt
caggacttgggtgacgaaatcgactgtgacgtgccaacctgtggtgaatggctgcgcaac
ttctatggtactttcagctcgcccaattatcctgacttctatcctcctggcagtaactgc
acctggctgattgacaccggcgaccaccgtaaggtcatcctgcgctttatggacttcaag
ctggacggcacaggctatggcgattatgttaaagtctacgatggactagaggagaacccc
aggcgtctgttgcgtgtgttgactgcgttcgactctcgagcccctgtagcagtggtgtca
tcttcaggacagcttcggatacacttttatgctgacaaaatcaatgcggctcgagggttt
aacgttacatatcaagtagagggtttctgcctgccgtgggaaatcccgtgcggagggaac
tggggttgctacactgaacaacagcgctgtgatggctactggcactgtcccaatggcagg
gacgagctcaactgcagcaactgccaggaagacgagttcccatgctcgcgaaacggtgcc
tgctacccacgctctgaccggtgcaactaccagaaccgctgcccgaacggctctgatgag
aagaactgctttttctgccaacctggaaacttccactgcaagaacaaccgctgcgttttt
gaaagctgggtgtgtgacgcgcaagacgactgcggggacggaagcgatgaggagagctgc
ccggtaatcgtgcccacgcgagtcatcactgccgctgtaatcgggagtctgatctgcggc
ctgctgctggtcattgctctggggtgcacatgcaaactctactcactcaggatgtttgag
cgcaggtcctttgagactcagctctctagagtggaagccgagttactgagaagagaagct
cctccatcgtatgggcagctgattgctcaaggactgatccccccagtggaggattttcct
gtctgctctggaaaccaggcatctgttttagaaaacctgagactggcagttcgctctcag
ctgggattcacctcaatccggctccccaccacaggacgtcacggcaacatctggagacgc
ctgttcaatttcacacgttcacggcgctctggttcccttgcactggtgtctgcggacaca
gaagagggtgctgatggaagcacctcagctcgtgagccggagaggcttggctctcgccgt
ggactcttgcccttggactccgacgatacggacactgagagtgagcagcatccccgcagg
gatgtcccaggagctgctggaggcctgatggcccctctgccacagaaaacaccccctaca
acagcagtggaagccatcgtctcggtgtctgccagctcggctccactcgtcagccgggag
agcagcatctctgagagcatctcggaaagttctggagtaactggatcctcatgtactact
actgctaccactacttcctcaagaagccccttcagcagcgctcttagccgggtcacccgc
agcctgcgatggattcgtttctctttagggcgctctggagatggagggtcaagtggcatt
gggcagaatcacagccctctgcggcaactggagcaaggaagtgtgggttgcactggggtt
ggcattagaggcgaggatgaggacgacgtggagctcctcattcccgtctcagatgcaagc
tccctggacagtgatgagagctccaggcccctgctggaacaaggcctggaacaggccttc
gggccccacctgacccccgctgcggtctctctcagaggccggctggtgggtagggatggc
ccctgtgaacactgtggaattgtccacacggcgcggatcccggacgcttgtctggaggcg
actgctaaaacagaaactagtgacgatgagtcactgctgctctgttaa
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