Carassius auratus (goldfish): 113119310
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Entry
113119310 CDS
T07313
Name
(RefSeq) syndecan-3-like
KO
K16337
syndecan 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04514
Cell adhesion molecule (CAM) interaction
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113119310
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113119310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
caua00535
]
113119310
Proteoglycans [BR:
caua00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
113119310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
SDH8
PepSY_2
Motif
Other DBs
NCBI-GeneID:
113119310
NCBI-ProteinID:
XP_026144437
Ensembl:
ENSCARG00000029181
UniProt:
A0A6P6RG78
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All DBs
Position
19:complement(7898383..7926719)
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AA seq
393 aa
AA seq
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MKLLCWMALALLLLAQTALAQRRTSRPRDDESSGDEFYDDEDFFSGSGSGFPDVDISPTS
AGVMVTTEEPLPLSTTQATGPAPSASPAAEPSSPPPPEVERESSLGQDVDRDGKEEQESK
ILTTLEPDKDEEEQERSKATVAPRLTDVPLVFVDSSTALVETTVASSDLEDLFTTEEEDL
FLTTETIMLETSSTPETTTDDIITTEVIPTTVASTTAKPTRPRPTPTTPSTAPIRPRKPH
TTPSRATPTESSTRSVMTTTQTQTTDETVNNEVAGPSPSGDFEISENGVRQGNEVRRGKG
VPGLAAEPDLTGNTVDAAGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVY
RMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctgtgctggatggcgctggcgctgctgctgctggcgcagactgccctggca
cagcgacgcacgtctcgaccaagagatgatgagagttctggagatgaattttacgacgat
gaggacttcttctctggatccggctctggctttccagatgtggacattagtccaacttca
gcaggtgtgatggtcactacagaagagcccctcccactttctaccacacaggccactggc
cccgccccctcggcctcccccgctgccgagccaagtagcccacctccacctgaggtggaa
cgcgagagcagcttgggacaagatgtagacagagacggcaaggaggaacaggaatctaaa
atcctaacaactttagaacctgataaagatgaagaggaacaagagagatcgaaagctacg
gttgccccccggctgactgatgttcctctagtgttcgtggactcatccaccgctctggtt
gagactacagtggccagtagtgatctggaggacctcttcaccacagaagaagaggatcta
ttccttactacagaaaccatcatgttagagacatccagcacaccggagacaacaacagat
gacatcataaccactgaggtcatcccaaccactgttgcgtccaccactgctaagccaacc
agaccacgtcctactccgaccactccgagcaccgcccccatacgaccccggaaaccccac
actacccccagcagagccaccccgactgagagcagcactcgatcagtgatgaccacaaca
cagacacaaacaacagatgaaaccgtaaataatgaagttgcaggaccaagtccaagtggt
gattttgaaatcagcgagaatggagttcgccaaggcaacgaggtcaggagaggcaaaggg
gtgcctggcctggcagcagaaccagatctgactggtaacacagtagatgctgctgggagc
tcagccgctcaacttccacagaagaacatccttgagaggaaggaggttttgatagcggtg
attgtcggaggtgttgttggagcactcttcgcagcattcctcgtaatgttactcgtctac
cggatgaaaaagaaagatgaaggcagctacacattggaggagcctaaacaagccaccgtc
acctaccagaaaccggacaagcaggaagaattctacgcctaa
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integrated database retrieval system