Carassius auratus (goldfish): 113119440
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Entry
113119440 CDS
T07313
Name
(RefSeq) peroxisome biogenesis factor 1-like
KO
K13338
peroxin-1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113119440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113119440
Membrane trafficking [BR:
caua04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
113119440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_16
AAA_lid_3
AAA_22
NPHP3_N
nSTAND3
AAA_14
RNA_helicase
TIP49
AAA_28
AAA_18
AAA_5
AAA_25
ABC_tran
AAA_33
DUF815
ATP-synt_ab
Sigma54_activ_2
RuvB_N
NACHT
AAA_29
Viral_helicase1
ATPase_2
IstB_IS21
Vps4_C
Motif
Other DBs
NCBI-GeneID:
113119440
NCBI-ProteinID:
XP_026144727
Ensembl:
ENSCARG00000037349
UniProt:
A0A6P6RH01
LinkDB
All DBs
Position
19:complement(12464450..12477573)
Genome browser
AA seq
1246 aa
AA seq
DB search
MLGSQGIQPVTLVFSNSKNCFLQLSSNFATHLCLHENQILELSWGVSAPVFLSWISSRSS
GPQDRVEISRQLGEKLGLKEGEQGYLRPCLQVQSVQQVFVEPLSPDDWEILELHSVALEQ
RLLDQIRVVFSEGVFPVWVDQHTVIYIRIASLSPSVPFGRLEKFTELVVTPKLHPGGEQL
LRTRSEEPGQYLQHQNIDVTSSSSSKVHQDPLSEHLESQNEAHWGGIADLKTLVRYLFRG
RFEPAKEHVAVPTIPTILKDCILRTCGTPPRSVSHLGSCHGDVHILPWNLQEQENWNPGQ
SALTYGRLSKILSPKELGEKVKQAMEKKKIRDGPHRGNDAEEHKENAVVVRMLCHNIKRL
QQDQKLNKCEDIYSGRVWIPKVLQRRLRIDPRSAVRIQPLKSKPRVAEAVMVQPLKPMAE
SEKEEDIQTAFLNWLHAQSHQPLSCLTGRTNIIVLPCAEGKEEFVLTVLKPEQQQEDEMF
FLSTSLLKKTNVQTFREPHASDHSGSDNDTEDPHLGFPSLSSLGGVEDISRSAFEHISHA
LMGGPLSRELVSTGRGLRGGALLITGAKGSGKSSLSRALCRKASEQLDAHVQVVYCKTLK
GKRADTIRQRLEEVFEQAVWRQPSVVLLDDLDHVTGAATSPEHEHGPEAVLRLHIAQSLR
DLVDEMVVRSSLVALMVTAQSEHGLHQTLTAVQGSHFFQSFCKIPTPDQTQRVAILRSLI
AKKNSQNCQTTLDLDSVARETEGFMPRDLHLLLERAIHANTLHSRNNGSSEDLNYKDFRQ
ALQGFTPPSLWGAQLQTPSGAGMERIGGLHQARQLLMDIILLPAKYPLLFSSLPMRQCSG
VLLYGAPGTGKTLLAGAVAKESGMNFISIKGPELLSKYIGASEQAVRDVFQRAQLAKPCI
LFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQLDGVEGLTGVYVLAATSRPDLIDPALLRP
GRLDKSLYCPPPDREARLEILKALTHSVPLAADVDMEQIAVATELFTGADLKALLYNAQL
EAIHSSLGPNILHDLGSGSDSDVSLSSLIFLNHSSGSDDSAGEGDTGLEHSMVLLDPSEL
PPEDPRHNIWRLYFGSSFESELDNQSLSELNSQCLSGPNSTAPDLTGASVRDPNSCRAPV
FMSCLQDGFQELTHDHSECLRAEVNTVKNSYRRNPDESSLVQTGPSKPGSVICQTHLISA
LANTRASVSREDWKRYNELYESYGASKEGKSQSTASFKAGQRVTLA
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgttgggaagccaaggaattcaacctgtcacgctagtcttcagtaactccaagaactgc
tttcttcagctgtcatcaaacttcgccactcatctctgtcttcatgagaaccagatcctg
gagctgtcctggggtgtttctgcacccgtgttcctcagctggatcagctccaggtcttca
ggtccacaggatagagtggagatcagcagacaactgggagagaaacttgggctcaaggag
ggagaacaggggtatctgcggccgtgtcttcaggtgcagtcagtgcagcaggtgttcgta
gagcctctgtctccagatgactgggagatcctggagctgcacagcgtggctctggagcag
cgactcctggatcagatccgagtggtcttcagtgagggggtttttcctgtgtgggtggac
cagcacactgtcatctatatcaggattgcatccctctctccctctgttccattcggccga
ctggagaagttcacagagcttgttgtcaccccaaaactacatccaggaggtgaacaactg
ctccgcactcgatcagaagagccaggccaatatctacaacaccagaacattgacgtcacg
tcttcctccagctcaaaagtccatcaggatcccctcagtgaacatctggagagtcagaat
gaagctcattggggaggaatagctgacctgaaaaccctggttagatacctgtttagagga
agatttgagcctgcaaaagagcatgtcgcagttcccacaattcccaccatcctgaaagac
tgtatcctccggacctgtggaacccctcctaggtctgtcagccatctaggctcatgtcac
ggagatgtccatatactgccatggaacctgcaagagcaagagaactggaatccagggcag
tctgctctaacatacggcaggctttcaaagatcctttctcctaaagaactcggggagaaa
gtcaagcaggccatggagaagaagaagatcagagatggacctcacagagggaacgacgca
gaggaacataaggagaacgctgttgtggtcaggatgctttgtcacaatataaaaaggctg
cagcaggaccagaaactcaataaatgtgaagacatttactctgggagagtttggatccca
aaggtgctgcagaggcgtttgaggatagaccctcgttcagctgtgaggattcagccttta
aaatcaaagccaagagttgcagaagcagtcatggtgcagccattaaaaccgatggcagag
agtgaaaaggaagaagatattcagactgcattcctcaactggttacatgctcagagccat
cagcctttgagctgtctgacaggccgcactaacatcatcgtcttaccctgtgctgaagga
aaagaagagtttgtcttgactgtgctgaaaccagagcaacagcaagaggatgaaatgttc
tttctttcaaccagtttactaaagaaaacaaatgtgcagactttcagagagccgcatgct
tctgaccacagcggctctgataatgatactgaagatccacatcttggctttccctcgctc
agctctcttggtggggtagaggacatcagtaggtcagctttcgagcacatctctcacgct
ctaatgggaggtcctctctcgcgtgagctggtctccacaggacggggactgaggggcgga
gctctgctcatcacaggtgcaaagggcagtggaaaatcttctctctccagagcactctgt
cgaaaggccagtgaacagctagatgcccatgttcaagttgtgtactgcaagacactgaaa
ggtaagagagcagacacaatcagacagaggctggaagaggtttttgagcaggcggtctgg
agacagccctcagtggtactgctggatgaccttgatcacgtgaccggagccgcaacctca
cctgagcacgagcatgggccagaggcagtgctgcgcctgcacatcgcacagagtctgagg
gatttggtggatgagatggtggtgcgctccagtctcgtagctctgatggtcacagcacag
agtgaacatggccttcatcagactctgactgcggtgcagggttcacacttcttccaaagt
ttctgcaagatcccaacaccagatcagactcaaagggttgcgattctaaggtctttaata
gccaaaaagaactcccagaactgtcagactactcttgacctagacagtgttgccagagaa
acagaaggattcatgccacgagacctgcacctgcttctggagagggccatccatgccaac
actctacacagcaggaacaatggcagctctgaagatctgaactataaggacttcagacag
gcccttcagggcttcaccccaccgtccctctggggggctcagctgcagactcccagtggg
gccggcatggagcgtatcgggggacttcatcaggcacgtcagctcctgatggacatcata
ctgctgccagctaagtacccgctgctgttctccagtctgcccatgcgtcagtgctctggt
gtgctgctctatggagctcctggcacaggcaagacgctactggctggagctgtagccaaa
gagagcggcatgaacttcatcagcatcaagggtcctgaacttctcagcaagtatattggt
gccagtgagcaggcggttagagatgtgttccagagggctcaactagctaaaccttgcata
ctgttctttgatgagtttgactctctggcccctcgaaggggtcatgacaacacaggggtc
actgaccgtgtggttaatcagctgcttactcagctggatggagtggaaggactgacaggg
gtgtatgtgttggctgccaccagtcgtcctgacctgattgatcctgctctattaagaccc
gggcgactggacaaatctctctactgccctcctcctgatcgggaggcccggctggagatc
ctgaaggctttgactcattctgtgccactggctgcagatgtggacatggagcagattgct
gtggcaacagagctgttcactggagctgacctaaaggcccttctctataacgctcagcta
gaggcgatccacagcagcctggggcccaacattctccatgatctgggctcagggtcagac
agtgatgtcagcctctcctccctgatcttcctgaaccatagcagcgggtcagatgactca
gctggggagggggacacagggttagagcactctatggttctgctggaccccagtgaactc
ccacctgaggacccacgccacaacatctggcgcctttacttcggaagctcctttgagtct
gaactggacaaccagtctctgtctgaactgaattcacagtgcctgtctggaccgaattca
actgcccccgacctgacaggggcatcggtgagggatccaaactcctgtcgtgccccagtt
tttatgtcctgtctgcaggacggctttcaggaactgacacatgaccattcagaatgcctc
agagcagaagtcaacactgttaagaacagttaccgcagaaacccagatgaatcatctctg
gtgcagactggtcccagtaaacctggctctgtcatatgccaaactcacctaatctccgct
ttggctaacactcgagcatctgtcagcagagaagactggaagagatacaatgaactatat
gagtcttatggagcctcaaaggaaggcaagtctcagagcactgcttcgtttaaagcaggt
cagcgggtgacattggcttaa
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