Carassius auratus (goldfish): 113119523
Help
Entry
113119523 CDS
T07313
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
caua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113119523
09124 Replication and repair
03420 Nucleotide excision repair
113119523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113119523
03400 DNA repair and recombination proteins [BR:
caua03400
]
113119523
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113119523
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113119523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
113119523
NCBI-ProteinID:
XP_026144850
Ensembl:
ENSCARG00000042211
UniProt:
A0A6P6RHZ6
LinkDB
All DBs
Position
19:complement(14605444..14613236)
Genome browser
AA seq
467 aa
AA seq
DB search
MMKLRVQLQCKNLHEYLKELSPEILDKLYNHPATCLAVYRELPSLAKNYVMRMLFLDHPL
PQAAVALWVKKDSQKDHDKCVSVLIGLRLWHSQHLQGGLQGFVLNPVFKDNLRVALLGGG
KPWTDEGSNLGPDRHARDVESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLTQAGLMK
SEAGEAPCITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGR
DYSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTVNTATGSASTAL
GATAGTGDTGFIVVETNYRVYAYTNSELQIALVALFSEMLYRFPNLVVAQVTRESVQQAI
ANGITAQQIIHFLSTRAHPVMLKQSPILPPTITDQIRLWELEKDRLQFTEGVLYNQFLSQ
ADFEVLRDRAQGLGVLVWQNPAHRVMVVSPHGHSEVKRFWKRQKSHT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcttcgagtccagctgcagtgcaaaaacttgcatgagtatctaaaggaattg
agtccagagatcctcgacaagctctacaatcacccagcaacatgcctggcagtctacagg
gaacttccatcattggcaaagaattatgtgatgcggatgctgtttttagaccatccactt
ccacaagctgcagtcgcgctgtgggttaaaaaagacagccaaaaggaccacgataagtgc
gtgtcagtgttaattgggctacggctctggcacagtcagcaccttcaaggtggactccaa
ggatttgtgctgaacccagtgtttaaagacaacctgagagtagcacttctaggcgggggt
aaaccgtggacagatgagggcagtaacctgggccccgatcgtcatgcgagggatgtagag
agtctggaccgctatgccatggagcgctgggaggtcatccttcacttcatggtgggctct
cccagcgcagccgtcagccaggatctggcccaacttctcacacaggccgggctcatgaag
agcgaggctggcgaggctccttgtatcacatcagcagggtttcagttcctgctgctggac
acagcatctcagctgtggtacttcactctgcagtacctcaaaacagcgcagtcgagagga
atggacctggtggagattctttcctttttgttccagctgagtttttccactcttggtagg
gattattctgtggagggcatgagtgagtctctgctcacatttttgcagcatttacgagag
ttcggtctggttttccaaagaaagaggaagtcaaggaggtactaccctaccaggttggcc
ataactctagctgcaggggtcacagtaaacactgccactggatctgcttcgactgcactc
ggagccacagcaggaacaggagacacaggcttcatcgttgtagaaacaaattaccgtgta
tatgcctacacaaactctgagctccagattgcactagtagctctttttagcgagatgctg
tatcggtttcctaacctggtggttgcacaggtaaccagagagtcagtgcagcaggccatc
gctaacggcattacagcacaacagatcattcacttcttaagtacccgagctcacccagta
atgcttaaacagagccccatccttcccccaaccatcacggatcagatcagactgtgggag
ctcgagaaagatcgcttacagttcacagagggagtcttatacaaccagtttttatcccag
gctgattttgaagtcttgcgggacagggctcagggtttaggtgtgctggtttggcagaac
cccgctcacagggtcatggtggtgtcgccacatggacacagcgaggttaagagattctgg
aagagacaaaagagccatacatag
DBGET
integrated database retrieval system
