Carassius auratus (goldfish): 113119526
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Entry
113119526 CDS
T07313
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113119526 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
caua01007
]
113119526 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caua03016
]
113119526 (vars2)
Enzymes [BR:
caua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
113119526 (vars2)
Amino acid related enzymes [BR:
caua01007
]
Aminoacyl-tRNA synthetase
Class I (U)
113119526 (vars2)
Transfer RNA biogenesis [BR:
caua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113119526 (vars2)
Prokaryotic type
113119526 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
bHLH_ILI
Motif
Other DBs
NCBI-GeneID:
113119526
NCBI-ProteinID:
XP_026144852
Ensembl:
ENSCARG00000042590
UniProt:
A0A6P6RHB0
LinkDB
All DBs
Position
19:complement(14635345..14653457)
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AA seq
1081 aa
AA seq
DB search
MWMAVHVASPRIWSRDLQKAWSTWGCRLCSQSSSGTQPSHPPRTQAEKAKRRQAREKAIL
TSDVNDPGLIWSDKEKITYTAALIPGEKKDTTLPIPQSYSPEYVEFGWYQWWEKQGFFSP
EQHSKQPHAVDKYFSFCIPPPNVTGTLHLGHALTVAIEDALARWRRMQGYKVLWVPGCDH
AGIATQSVVERMLMREHGKCRRDYSREEFLKQVWRWKNEKGDEIYHQLRKLGASLDWNRA
CFTMDPGFSSAVTEAFVRLCDSGLIYRSEGLVNWSCALESAISDIEVDSKELSGRTLLSV
PGYQQKVEFGFMLTFAYPLEGQQGEVAVSTTRPETMLGDVAIAVHPDDPRYKDLHGKHCR
HPFTERLLPIVTDPMVDVTFGTGAVKVTPAHDHTDFLLSQRHSLPRLTVIGGDGTMTSDC
GQWLEGVKRFDARERVITALMERKLFRGKKDHPMSLPICSRSGDVIEPLLKKQWFVRCQE
MGRKAVQAVEEGDLQIIPHFYTKMWKSWLSNISDWCISRQLWWGHQIPAYRVTVENSKDT
DEQEQWVWGRSAAEARQRAAVKFGVNPDAITLTQDPDVLDTWFSSGLFPFAMLGWPQQTE
DLKQFYPNSILETGSDLIFFWVARMVMLGRELTGQLPFKQVLFHSLVRDKYGRKMSKSLG
NVIDPLDVISGVSLERLQEKVKEGNLDPRESVVAIEAQKKDFPKGIPECGTDALRFALCS
YKAQGEDISLSVSHVLSCRHFCNKMWQTVRFTLATLHDASLPTSLAETYPLSSMDRWICN
RLYSTVQQCERGFQSYELHTVTSALHSFWLHSLCDVYLESIKPVLKGEGSGSEEQRDRER
QVAAAVLYHCVSISLTLLSPFMPFLTEELWQRLLPYADSDGTSRSLCVQPYPKTSQLEHW
CFPKEEADFSLVQEVVRVARLLRAQCQLTKERPDLWAVCAQDQAETLVRFRSAVCTLGRI
SALHLHCPEAGFSDSPPPPKASAVGVVDHSICLHLSVQNGINVDKQRALLSQRREKLASK
LTQALARTQMPNYAEKVPNRVRQETENKIAALEQELKNIEDQLLALEETQGKKSNGHQFN
Q
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtggatggctgtgcatgtggcgtcacccagaatctggagcagagatcttcagaaggcc
tggagcacgtggggatgcagactctgctcccaaagctcatctggcacacagccttctcat
cctcccaggacacaagcagagaaagccaaacgcagacaagcgcgggagaaggccatactc
accagtgatgttaatgatcctggactaatctggtcagataaagagaaaataacatacact
gctgcactcatacctggagagaagaaagacaccactctgcccatcccacaatcctacagc
ccagaatatgtggagtttggctggtatcagtggtgggagaaacagggattcttcagtcct
gagcaacatagtaaacagccccatgcagttgataaatatttctccttctgtattcctccg
ccgaatgtgaccggcacattacatctcgggcatgcgctgacggtggctatagaggatgct
ctggctcgctggcgacggatgcagggctacaaggtgctgtgggttcccggctgtgaccat
gctgggattgcgacacagtcggtggttgagaggatgctgatgagagagcatgggaagtgc
agacgagactacagcagagaggagttcctcaaacaggtctggagatggaaaaatgaaaag
ggggatgagatttatcatcagctgagaaaacttggtgcgtctcttgactggaaccgagcc
tgttttacaatggatccgggtttcagcagtgctgtgacagaggcctttgtcagactgtgt
gactctgggctcatctatcgctctgaaggtctggtcaactggagctgtgcattagagtcg
gccatctcagacatagaggtggactcaaaggagctgtctggcaggactcttctgtctgtt
cctggttatcagcagaaagtggagttcgggttcatgcttacgtttgcttatccactggag
ggacagcaaggagaggttgccgtttcaaccacgcgtccagagacgatgctgggagacgtg
gccattgctgttcatcctgatgaccctcgatataaagaccttcatgggaaacactgcagg
catccattcactgagcgcttattgcccatcgtcactgacccgatggtggatgtgacattt
ggcacaggtgctgtgaaagtgaccccagctcatgaccacactgacttcctgctctctcag
agacattcactccctcgcctcactgtgattggaggagatgggactatgacctcagactgc
ggccaatggctagagggtgttaagcgatttgatgccagggagcgtgtgattactgcgctg
atggagaggaagcttttcagaggaaaaaaggatcatcccatgtctttaccaatctgcagt
cgttctggagatgtgattgaaccgttgctgaagaaacagtggttcgtgcgctgtcaggaa
atgggcagaaaagcagttcaagcggtggaagaaggagatctacagataattcctcacttt
tacacaaaaatgtggaagagctggctgtccaatatcagcgattggtgtatttccagacag
ctttggtggggtcatcagataccagcctatcgagtgacagtggagaactcaaaggacaca
gatgagcaggagcagtgggtttggggcagaagtgctgcagaggcgcgacaacgtgccgct
gtgaagtttggagtgaatcctgatgccatcacactcacacaggacccagatgtgcttgat
acttggttctcctctggtctcttcccgttcgcaatgctcggctggcctcagcagacagaa
gacttgaaacagttctaccccaattccattctggaaacaggaagtgacctcatcttcttc
tgggtggccaggatggtgatgctgggcagagagttgaccggccagctgccctttaaacag
gtgctctttcactctctggtgagagataaatatgggcggaagatgagtaaatctttagga
aacgtcattgaccctcttgatgtcatctcaggggtttctttggagagacttcaagagaaa
gtcaaagaaggaaacttggatccgagggaaagcgttgttgccattgaagcccagaagaaa
gatttccccaaagggattcctgagtgcgggacagatgctttgaggttcgcgctctgctct
tataaagcccagggagaggacatcagcctgtctgtgtcccatgtgctgagctgtagacat
ttctgtaataagatgtggcagaccgtgcgcttcaccctcgccacgctgcatgatgcaagt
ttaccgacatcattagcagagacctatcctctgtccagcatggaccggtggatctgtaat
cgtctgtacagcacggttcagcagtgtgagaggggtttccagagctacgagctccacacg
gtcacgtctgcactgcactctttctggctccacagtctgtgtgacgtctatctggaaagc
atcaagccggtgttgaaaggtgaaggctctggtagtgaggaacagagagatcgagaaagg
caggtggccgcagctgtgttgtatcactgcgtgtccatctctctcacgctcctctcgccc
tttatgcctttcctcacggaggagctgtggcagagactcctgccttacgctgactctgac
gggacgtcccgcagcctgtgtgtgcagccctacccaaagacctcacagctggagcactgg
tgttttcctaaggaggaggccgacttctctttggtacaggaagtggtcagagtggcgagg
ttactgagggctcagtgccagctgaccaaggaaagacctgacttgtgggcggtgtgtgca
caggatcaggctgagactcttgtgcgcttcagatcggccgtctgcacgctgggccggatc
tcagcgcttcatctacactgtccagaggcaggcttctccgactctcctcctccaccgaag
gccagtgctgtaggggtggtggatcactccatctgcttacatctcagcgttcagaatggt
attaatgttgacaaacagagagctctcctctctcagcgcagagaaaagctggcctccaaa
ctcacacaagccctcgctcgcacccagatgcccaactatgcagaaaaagtacccaacaga
gtcagacaagagaccgagaataagattgcagctttggagcaggagctgaagaacatcgag
gaccaacttttggctttggaagagacgcaaggaaagaagtctaatggacaccaattcaac
caataa
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integrated database retrieval system
