Carassius auratus (goldfish): 113119543
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Entry
113119543 CDS
T07313
Name
(RefSeq) iroquois-class homeodomain protein irx-1-A-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113119543
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113119543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
113119543
NCBI-ProteinID:
XP_026144888
Ensembl:
ENSCARG00000050118
UniProt:
A0A6P6RI96
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All DBs
Position
19:complement(14954045..14957024)
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AA seq
446 aa
AA seq
DB search
MSFPQLGYPQFLNASQEMYGAERTAVMPCSPREGSSENSANPATAAAAITPMLGMYANPW
TVQNYSAFLPYNSAELALLSQMGSQYELKDNPGAHPPGFAVHAAPGFYPYGQYQYGDPSR
AKSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGRSAEDRDGRFFDSDNDDDAEKNDDEEEIDLETIDIDKPEEPRGDQNKESSDNQSER
EHVETPRILSSPSALKNTDSPTSSSNKEQSVVKSVGEVSPGAPVCQRPGNSKPKIWSLAE
TATSPDNTQKLGVSSTPAGLRASPSSHPAFLSTNGIYTCQIGKLHNWASAAFLSANSLMG
VRSLLSQNNNFPNHSPVTNPGKKPSFASGSPCLDSDNSSDSFSPKHNDQENVQRIESPTL
ASRPPFPVIHDRSHHETSQRALKTIS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccccagttgggttacccacagtttctaaacgcctcccaagagatgtacgga
gcagagcgcacggcggtcatgccgtgctctccacgcgagggaagctcggagaacagcgca
aatcctgcgactgcagcggcggcgatcactccgatgctcggcatgtacgcgaatccgtgg
accgtgcaaaactacagcgccttcttaccttacaacagcgccgagctggccctgctctct
cagatggggtcgcagtatgagctgaaggataaccccggggcacatccaccaggatttgca
gtacacgctgcgcccggtttctacccatatggccagtaccagtacggtgacccgtcccgg
gccaagagcgctaccagagagaccaccagcacactgaaagcgtggctgcaggagcataaa
aagaacccgtatcccaccaagggggagaagatcatgctggccatcatcacaaagatgacc
ctcacgcaggtgtccacctggttcgccaacgcgcgccggagactcaagaaggagaataaa
gtgacctggggtcgcagcgcggaggacagagacgggagattttttgacagtgacaatgac
gacgacgcggaaaaaaacgacgacgaggaagaaattgatctagagaccatcgatattgac
aagcctgaggagcctagaggagaccagaacaaggaaagctcggataatcagagcgagaga
gaacatgtagaaacaccgcggatattatcttcaccatcagcacttaaaaacacggacagc
cctacgtcgagtagtaataaagagcagagtgttgtcaaaagcgttggtgaggtgtctcct
ggtgcgccggtgtgtcagaggcctgggaacagcaaacccaaaatctggtccttggcggag
acggcgacaagtccggataacacacagaagcttggtgtgtcctcgacgcccgcgggcctc
agggcctcaccctcgagccatcccgcgttcctctccactaacgggatttatacctgccag
attgggaaactacacaactgggcgagcgccgctttcctcagtgcaaattctttgatgggt
gtacgttcacttttgagtcaaaacaataacttcccaaaccacagccctgttacgaaccct
ggaaagaaaccgtcgtttgcctctgggtctccttgtctagacagcgacaactcatccgac
agtttcagtcccaaacataatgatcaagagaacgttcagagaattgaatctccaacactt
gcgtccagaccaccgtttccggtcatccatgacaggtctcatcatgaaacatcacaacgc
gctctgaagactatttcatga
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