Carassius auratus (goldfish): 113119860
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Entry
113119860 CDS
T07313
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113119860
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113119860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
113119860
NCBI-ProteinID:
XP_026145349
Ensembl:
ENSCARG00000049313
UniProt:
A0A6P6RI04
LinkDB
All DBs
Position
19:24099442..24124002
Genome browser
AA seq
2448 aa
AA seq
DB search
MKPIKKQERRSPPSTRAKGGKKRTADSSPQEEKRETEEKTQISSTSPKRHISSNSDSSQE
GPMTRSGSPEKVGPLSIAVDFGKTEECPRSSKSGGTQSDSNSSTISASNSPNPSSSRKTA
TFKARVPKKKYTSEHYAGNHGNASTPSTPPQSSSSSHNGSSASQGPAASAAHTDLHGQSQ
LAEDNITGYGHNDVTGPTGGTAGECRERDGPSASSPQRCSSTDTASEHSADLDVTTSRRD
SNSNSQKQQAHSTSTSSQESLSSGVAGVLAKGLKNQRVLARQGPRLGEGWPHDRGREISG
VFRTGVVRRVSEEHGIVEVQLNGEKTICKYPFRVATDSVDLILDASPPGVAPVAIGSLVC
IPFGGGDEGSEGAQKWYREGIVTQVDPHPAVSFPYRVQLREDRSDERKERSGVEDDGRAQ
AIWVSRQNLRLLVPPWDFEPAQPAEPGIDGRRVREREWEEREDMEVEQEVVQLTRPTFVQ
SLLQPFPSPHSSSSVVNTAITSVLSVPPNRDWETHREKDQERDLHRHLERERERERERER
QKHHQPHHLYSSTPDGVDLEVSCLSQLRDGGITALGSKALGAPSQHRPILSKPNYLSPHL
SVVRGLSTPITPHLPLAPHPNHPPMLLGLGSATGAAVISSTSQLPHLPPSSSQGSLDKTP
SSNLHGASGGGSGSSSSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNGKQWRRLCSRE
GCSKESQRRGYCSRHLSMRTKEMESGGGVGRDRSGASSTGTITPDLRLGGRTSSEYDWDD
NSRDSSEASSRGGDSRPRLVMTSLIPQELTRDMSRFDFDECEAANMLVSLGSSRSCTPPF
SPVSNQSPFSPAPSPSPTLFGIRPDNFSPITAPLTPRRPRHLSGTKIPGTPSSERERHIS
GHIVPTFQNNLTFTVPMSPSKRKLDVPPPPLPSTSDYGKSDPQLNDPSLSLNAAAFRVLS
PQSQPTTPSYLSFSRQRSITSRPSSSAASTPPPMLVSPTPPSPLPQDPSSRRIVPLRDSP
VIVRNPDVPLAKFSDGPLSRRASSRSREHSQTFHHAVGLQAPVPINGAATNGAVLLRNPA
PTLVLVTSSQSLTTVASGHPAHSNSAALNVSTSNATTGPTLALSGSGGKEQERKLGGPSV
AGGSLPQPVACHPSPTALLPLILPAESPHPAPRKDIIMGRPGTVWTNVEPRSVPVFAWHS
LVPFLETSQTKMSMQPADGQTLVNQSKEPRCGVALVTEGPTDHPTPQRGSPSCPPPPAED
PPVEGGGDSETESDADDLFFPAQDTAPSTSPVKRRTQSLSALPKEGDKKREKDHIRRPMN
AFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKKKYHDLAFQVKEAHFRAHP
DWKWCNKDRRKSLSEGRGTPGAKEARERSMSESTEAHSASQGADHKGAGPSWTSPRPDGH
GSMGGQLQRPRAFSQSAVHTLERREKERVLESTGPFHPRAPAHPQRLSEDVTSDEEPMVI
CEEGDDDVLEDSFADGSIDLKCKERVTDSDDENEHADEADSKRTFQPVHSSSALSPTGTT
GNKDIEDGGEKNLEKKEKRGMGGAELDNWGIQEGKVGGGGGQVLFHVNSASVTGITTTLP
HNPGTYPLQGAVRMAPTVVTNVVRPITSTPIPIASKPADGGVAVGTLPPDRKPKLLIGAG
GAGGGGYFPSSSPKPNGQGSLVTSLVLGGAFQNQPTVQLITPPQPTPCNGAPNNSAVPLP
LLHHQFLPAASSGGKPVTQVQYILPTLPATANPNSPSSQQPSSVLTLSSAAPTHVSLANG
VHSGAGQGLRYASVPAVGGVSTAGGVHAQSPVLQSKMLVPMATMGTGSTPPQPISLVGPP
LPVQHGTQPGSKIIQIAPMPVVQTNVHPGGSVHTGNSFPVSMPTATVMAPAPTPPQTVLL
TPPPTRITYVQSTPGVTAPFPLGSTPAVSSTHQTPSPAAPSFLQSPVATIGFTAIAPAGQ
ALVQPIVASQPPLLAPCPPLGGLSQPAQASTATHQLVTAIYPSVSLAGGVVSVTAVPQST
ESSTSAPASSSMHPEKTPSAAAAQPHAQTDPQLQSQGNMHMENERGPETRKEMEKQRDLV
VSKDGHQTPPSGLEESVQHTNKGQHCEGKEDGKKGSELERESERDVGGVPSQTERAERAR
AMEGETESQAEINSKDESREPGRREASVLDPPPPPLQTDSPSVKKTKFRPPPLKTPTDAG
DKALFGSSFEERLKELPEFKPEDVLPSPNLQSLATSPRAILGSYRRKRRNSTDLDSVDDP
SSPRRKSRCLSSCSSEPNTPKSAAKCEGDIFTFDRAAGETEHILEEFDRVPPSSLRRMLD
QRRALVMQLFQEHGFFPSAQATAAFQARHSDTFPSKVCLQLKIREVRQKIMQNAGSSETM
GGVASGSSDSASTPGPSNPAARENSDADERGRATEEPKKDMGEPQESR
NT seq
7347 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccattaaaaagcaagaaaggcggtcgcccccatccactcgtgccaagggaggt
aagaagaggacagcggacagtagcccacaggaagagaagagagaaacagaggaaaaaacc
caaatttcatctacctctcccaagagacatatctcctcaaattctgactcatcacaggaa
gggccaatgacaagaagcgggtctccggaaaaggtggggcccctcagtatagcagtggat
tttgggaagacagaggaatgccccagaagctcaaagtctgggggaacacagagtgacagc
aacagtagtacaatcagcgccagcaacagccccaacccttcatctagtcgcaagacagcc
acttttaaggcccgtgtgcccaagaagaagtacacctcagagcactatgccggaaaccat
ggcaacgccagcactcccagcactcccccacagagcagcagcagctctcataacggaagt
agtgctagtcagggtccagctgcctctgctgcacacacggacctacacggtcaaagccag
ctggctgaggataacatcactgggtatggacacaacgatgtaactgggcctacaggtgga
actgcaggtgagtgcagagaaagggacgggccgagcgcatccagtccacagcgttgctcc
tcaaccgacacagccagcgaacactcggctgacctagacgtgacaacttcaagacgtgat
tctaactccaactcccaaaagcaacaagcacatagcacttcgacatcctcacaggagagc
ctgtcatccggtgtagccggtgtcctcgccaaaggtctaaaaaatcagagagttctggcc
cgacagggtccaagattaggggaaggctggcctcacgatcggggccgggaaatatctggt
gtgtttcgcactggagttgtgcggagagttagcgaggagcatgggattgtggaggtgcaa
cttaatggagaaaagaccatatgcaagtatccatttcgagttgctactgattctgttgac
cttattttagatgcctcacctcctggtgtggccccggtggctataggatcactagtctgc
atccccttcggaggaggtgacgagggcagtgagggagcacaaaagtggtacagagaaggt
atagtcactcaagtagatccacacccagctgtgtctttcccataccgtgttcagctaagg
gaagatcggtctgatgagagaaaggagaggagtggtgtggaagatgacggaagggctcag
gccatttgggtttcacgacaaaatctccgtcttctggttcctccttgggattttgagcca
gcccagccagcagagccaggtattgatggaaggagggtaagagaacgagagtgggaggaa
agagaggacatggaagtggagcaggaggtggttcaactgactagaccaacgtttgttcag
agtttgctgcaacctttcccctcaccccattcttcgtcctctgtcgttaacactgccatc
acatctgtactcagtgtgcccccaaacagagactgggaaacccacagagagaaggatcag
gaaagagacttgcataggcacttagagagagaaagggaacgagaacgagaaagggagagg
caaaagcatcatcaaccccatcatctttattcatccaccccagatggtgtggacttggaa
gtcagctgtcttagccagctaagggatggtggcatcactgccttgggaagcaaagctctt
ggggctccttctcagcatcggcccattctttctaaaccaaactacctcagccctcacctt
tctgtggtgagagggctcagtaccccgattacaccccatttgccccttgctcctcaccca
aatcacccccctatgctcttgggcctgggttcagccacaggtgcagcagtcatctcatcc
acgtcccagcttcctcacttgcccccaagctcttctcaaggctccctggacaagaccccc
agctccaacttacatggtgcatcagggggtggctctggatcctcatcctcttcgtcacgg
tcccgcacacccctcacggccgctcaacagaagtacaagaagggcgatgtggtgtgcacc
cctacaggcatccgcaagaagttcaacggaaagcagtggcgcagactttgctcacgtgaa
ggctgctcgaaggagtctcagaggcgtggctactgctctcggcatctctccatgcgcacc
aaagagatggaatccggaggcggggttggccgagacaggagtggcgccagtagcactggc
accatcacacctgaccttcgtttaggtggacgcaccagcagcgaatatgactgggacgac
aactcaagagacagcagtgaagccagcagccgtggcggggactctcgaccacgtctggtg
atgacttctcttataccacaagaactgacacgtgacatgtcgcgctttgactttgacgag
tgcgaggctgcaaatatgttggtctcactaggaagctcacgctcatgcacgcccccattt
tcacctgtatccaatcagtcaccattctcacctgcgccatccccctcgcccacgctattt
ggcatccgcccagataatttcagccccatcacagcaccactgacccctcgccgccctcgc
cacctcagtggcactaaaatccctggcactcccagctcagaacgtgagcgccacatctct
ggccacatcgtccccacttttcagaacaacttgacattcactgtacccatgagtcccagt
aaacgtaaacttgatgtccccccacccccgctgcctagtacatcagactatgggaaatct
gatccccaactcaatgaccccagcctcagcctcaacgcagcagcattcagggttctatcc
cctcaaagccagcctaccaccccctcatatctctcattttctcgacagaggagcatcaca
agccgaccctcatcctctgccgcttccactccaccccctatgctggtttctcccacacca
ccctcgccactgccacaggatcccagctcacgtcgtatcgttcccctacgcgattcacct
gtcattgttcgtaaccctgatgtgccgttggcaaaattcagcgatggtccactgagccgt
agagcaagctcacgctctagggagcacagccagacctttcaccatgccgtgggcctccag
gcccctgtgcccataaatggtgctgccaccaacggagccgttcttcttcgtaatcctgct
cccactttagtcctggtgacttcctctcagtcattgacaactgtggcttctgggcatccc
gcccattcaaactctgccgctttgaatgtgtccacctctaatgcaaccactggacctacc
cttgcactatctggctcaggaggtaaagagcaagagaggaagttgggtgggccttcagtt
gcaggtggttctctcccacagcctgtggcttgccatccttcacccactgctctgttgccc
ctcatcctgccagctgagtcccctcaccctgctcctcgcaaagacatcatcatgggacgg
cctggcactgtttggaccaatgtggagccccgctctgtgccagtgttcgcgtggcattcg
ttggttccttttttggagaccagccagacaaaaatgtccatgcagcctgcagatggccaa
acacttgtaaatcagagcaaagaacctcgctgtggagttgcccttgtgactgagggacct
actgaccatccaactccacagagaggttccccgtcttgcccacctcctcctgctgaagac
ccacccgtggagggaggaggtgacagtgagaccgagagtgatgctgatgacctttttttc
ccagctcaagacactgctccatccaccagtccagtgaaaagacgcacacaatctctcagt
gcactcccgaaagaaggtgacaagaagagggaaaaggaccacatcagacggccgatgaat
gcatttatgatctttagtaagcggcaccgtgcactggttcaccagcggcaccccaaccag
gacaaccgcaccgtcagtaaaatactgggtgagtggtggtacgcgctgggacccaaagag
aagaagaagtatcatgatcttgccttccaggtgaaggaggctcatttccgagctcaccct
gattggaaatggtgtaacaaggacagaaggaagtccctgtctgagggcaggggaactcca
ggggccaaagaagctcgcgagcgcagcatgtctgaaagcacagaggcccattctgcatct
cagggggcagaccacaaaggagcaggacccagctggacttcacctcggcctgacggtcac
ggatcaatgggagggcagcttcaacggcctcgcgccttttcccagagcgctgtgcatact
ttggagaggagggagaaggagagagtgctggaaagcacgggaccgtttcatccccgtgcc
cctgctcaccctcaacgactgagtgaggatgtgaccagtgatgaagagcctatggtgatc
tgcgaagagggggatgatgatgtcctagaagactcatttgcagacggctccattgacctg
aagtgtaaagagagagtgacagacagcgatgatgaaaacgagcatgcagatgaagctgac
agcaagcgcaccttccaaccagtccattcctcttcggcgctctctccgactggcacaact
ggcaacaaagacattgaagatgggggtgaaaagaacctggagaagaaggagaagagaggt
atgggtggtgcagaactggataattggggaattcaagaaggcaaagtaggaggtggagga
gggcaggttttgttccatgttaattcagcctccgtgactggtataactaccactttgcca
cacaatcccgggacataccctttgcaaggtgctgtcaggatggcccccactgtagtgacc
aatgttgttcgtcccatcactagcacccctatccccatcgccagcaagccagctgatggg
ggtgtggctgttgggacccttcctccagacaggaagcccaagctactgatcggtgctggc
ggagcaggaggaggtgggtactttccctcctcttctcccaaacctaatgggcaaggaagc
ttagtaactagcctagtcctgggaggagccttccaaaaccaacccaccgttcagctcatc
accccaccacaacctactccatgcaacggagcccctaataacagcgcagtaccccttccc
ctgcttcatcaccagttcctccctgctgcctctagtggtgggaaacccgtaacacaggtg
cagtacattcttccaactctacctgcaactgccaatcccaacagtccctcctcccagcag
ccctccagcgtcctaaccttgtccagtgccgcacccacccatgtgagcctggccaatggt
gtacattcaggggcagggcaaggattaagatatgcttcagtcccagcggtgggaggagtc
agcacggcaggtggagttcatgcacagtccccagtcttgcagagcaagatgttggttccc
atggcaacaatgggaacaggatctacacctccgcagccaatttccctggtgggtccaccc
cttcctgttcaacatgggactcaaccaggaagtaagatcattcaaattgcaccaatgcct
gtggtccaaacaaatgtgcatcctggaggatcggtgcataccggcaactcgtttcctgtc
tctatgccaaccgcgactgtcatggcccctgcgcccacccctcctcagacggtgctcttg
acgccaccacctacaaggatcacatatgtccagtcaactcctggagttacagctcctttt
ccattgggttcaacacctgcagtctcttccacccaccagaccccgtcacctgcggctcca
tcttttttacaatctccagtggcgaccattggcttcactgcaattgcaccagctggtcag
gccttggttcaacctattgttgcaagtcagccacccctcctggctccatgcccacccctg
ggtggattgtcacaacctgcacaagcctcaacggccacccatcaacttgtgaccgccatt
taccccagcgtcagcttagccggaggagttgtgtcagtgacagccgtgccacaaagcaca
gaaagttccacatcagctccagcatcatcctcaatgcatccagagaagaccccctcagcc
gcggctgcgcaaccacacgcacagacagacccgcagcttcagtctcagggaaacatgcac
atggaaaacgagagaggaccagaaactaggaaggagatggagaaacagagagacctggtg
gtgtcaaaggatggacatcagacgccacctagtggtttggaggaatcggtgcagcacaca
aataaaggtcagcattgtgaagggaaggaggatggaaagaaagggagcgaactggagcga
gagtctgagagagatgttggaggggtcccgtctcaaacagagagagctgagagagcaaga
gcgatggaaggagagaccgagagtcaagctgagatcaacagcaaagacgagagtcgagag
ccaggacgcagggaagcttctgttttggaccccccaccaccccctttgcagactgactcc
ccttcagttaaaaagaccaaattccgcccacctccactgaaaacccccacagatgctggt
gacaaggcgctgtttggctcctcttttgaagagcgtcttaaagagctgccagagttcaag
cctgaagatgtactgccctctcccaatttacagagtttagcaacttcccctagagccatc
ctgggcagctaccgcaggaagcggaggaactctacagatctagactctgttgacgacccc
agttcacctcggaggaagagtcgctgcttgtccagctgcagctcagagcccaacacaccc
aagagtgctgccaagtgtgagggggacatctttaccttcgacagggctgcaggagagaca
gagcatattttggaggagtttgaccgtgtgccgccttcctctctgcgtaggatgttggac
cagcggcgtgcgctcgttatgcagctcttccaggagcacggcttcttcccctcggcgcaa
gccacagctgccttccaagctcgccactcggacacgtttcccagcaaggtgtgcctgcag
ctgaagatccgcgaggtaaggcagaagatcatgcagaatgccggcagttcggaaaccatg
ggaggcgtggccagtggaagctctgactccgcctctactcccggaccatccaatccagcg
gccagggagaattccgatgcggatgagaggggcagggccacggaagagccaaagaaagac
atgggcgagccgcaggagtcgagataa
DBGET
integrated database retrieval system
